Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS00910

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS00905 and ABZR88_RS00910 are separated by 143 nucleotidesABZR88_RS00910 and ABZR88_RS00915 are separated by 172 nucleotidesABZR88_RS00915 and ABZR88_RS00920 are separated by 123 nucleotides ABZR88_RS00905: ABZR88_RS00905 - TerC/Alx family metal homeostasis membrane protein, at 184,534 to 185,586 _RS00905 ABZR88_RS00910: ABZR88_RS00910 - diadenylate cyclase CdaA, at 185,730 to 186,521 _RS00910 ABZR88_RS00915: ABZR88_RS00915 - HAD family phosphatase, at 186,694 to 187,311 _RS00915 ABZR88_RS00920: ABZR88_RS00920 - EVE domain-containing protein, at 187,435 to 187,839 _RS00920 Position (kb) 185 186 187Strain fitness (log2 ratio) -2 -1 0 1 2at 185.670 kb on + strandat 185.690 kb on + strandat 185.866 kb on - strand, within ABZR88_RS00910at 185.872 kb on + strand, within ABZR88_RS00910at 185.873 kb on - strand, within ABZR88_RS00910at 186.108 kb on - strand, within ABZR88_RS00910at 186.157 kb on + strand, within ABZR88_RS00910at 186.236 kb on - strand, within ABZR88_RS00910at 186.317 kb on + strand, within ABZR88_RS00910at 186.318 kb on - strand, within ABZR88_RS00910at 186.318 kb on - strand, within ABZR88_RS00910at 186.520 kb on - strandat 186.580 kb on + strandat 186.695 kb on + strandat 186.986 kb on + strand, within ABZR88_RS00915at 186.989 kb on - strand, within ABZR88_RS00915at 187.422 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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185,670 + +0.3
185,690 + +2.1
185,866 - ABZR88_RS00910 0.17 -1.9
185,872 + ABZR88_RS00910 0.18 +0.1
185,873 - ABZR88_RS00910 0.18 -0.4
186,108 - ABZR88_RS00910 0.48 -2.0
186,157 + ABZR88_RS00910 0.54 -1.7
186,236 - ABZR88_RS00910 0.64 -0.9
186,317 + ABZR88_RS00910 0.74 +1.5
186,318 - ABZR88_RS00910 0.74 +0.1
186,318 - ABZR88_RS00910 0.74 -1.2
186,520 - -1.3
186,580 + +0.1
186,695 + +0.2
186,986 + ABZR88_RS00915 0.47 -0.0
186,989 - ABZR88_RS00915 0.48 -0.2
187,422 - +0.4

Or see this region's nucleotide sequence