Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS00705

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS00700 and ABZR88_RS00705 are separated by 87 nucleotidesABZR88_RS00705 and ABZR88_RS00710 are separated by 186 nucleotides ABZR88_RS00700: ABZR88_RS00700 - hypothetical protein, at 131,405 to 132,994 _RS00700 ABZR88_RS00705: ABZR88_RS00705 - DUF423 domain-containing protein, at 133,082 to 133,465 _RS00705 ABZR88_RS00710: ABZR88_RS00710 - primosomal protein N', at 133,652 to 136,138 _RS00710 Position (kb) 133 134Strain fitness (log2 ratio) -2 -1 0 1at 132.128 kb on + strand, within ABZR88_RS00700at 132.129 kb on - strand, within ABZR88_RS00700at 132.181 kb on - strand, within ABZR88_RS00700at 132.209 kb on - strand, within ABZR88_RS00700at 132.315 kb on - strand, within ABZR88_RS00700at 132.983 kb on + strandat 133.087 kb on + strandat 133.121 kb on - strand, within ABZR88_RS00705at 133.256 kb on + strand, within ABZR88_RS00705at 133.257 kb on - strand, within ABZR88_RS00705at 133.335 kb on - strand, within ABZR88_RS00705at 133.463 kb on + strandat 133.618 kb on - strandat 133.628 kb on - strandat 134.174 kb on - strand, within ABZR88_RS00710

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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132,128 + ABZR88_RS00700 0.45 -0.1
132,129 - ABZR88_RS00700 0.46 -0.4
132,181 - ABZR88_RS00700 0.49 +0.4
132,209 - ABZR88_RS00700 0.51 +0.6
132,315 - ABZR88_RS00700 0.57 +0.1
132,983 + +0.3
133,087 + -1.9
133,121 - ABZR88_RS00705 0.10 +0.1
133,256 + ABZR88_RS00705 0.45 -0.4
133,257 - ABZR88_RS00705 0.46 -0.1
133,335 - ABZR88_RS00705 0.66 -1.5
133,463 + -1.2
133,618 - -0.3
133,628 - -0.1
134,174 - ABZR88_RS00710 0.21 +0.1

Or see this region's nucleotide sequence