Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20520

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20515 and ABZR88_RS20520 are separated by 171 nucleotidesABZR88_RS20520 and ABZR88_RS20525 overlap by 4 nucleotidesABZR88_RS20525 and ABZR88_RS20530 are separated by 221 nucleotides ABZR88_RS20515: ABZR88_RS20515 - alkaline phosphatase PafA, at 4,966,409 to 4,968,064 _RS20515 ABZR88_RS20520: ABZR88_RS20520 - acyl-CoA dehydrogenase, at 4,968,236 to 4,969,336 _RS20520 ABZR88_RS20525: ABZR88_RS20525 - nicotinamide riboside transporter PnuC, at 4,969,333 to 4,969,965 _RS20525 ABZR88_RS20530: ABZR88_RS20530 - TonB-dependent receptor, at 4,970,187 to 4,972,580 _RS20530 Position (kb) 4968 4969 4970Strain fitness (log2 ratio) -2 -1 0 1 2at 4967.280 kb on + strand, within ABZR88_RS20515at 4967.707 kb on + strand, within ABZR88_RS20515at 4967.707 kb on + strand, within ABZR88_RS20515at 4967.712 kb on + strand, within ABZR88_RS20515at 4967.712 kb on + strand, within ABZR88_RS20515at 4967.713 kb on - strand, within ABZR88_RS20515at 4967.901 kb on + strandat 4968.085 kb on - strandat 4968.099 kb on - strandat 4968.357 kb on - strand, within ABZR88_RS20520at 4968.563 kb on - strand, within ABZR88_RS20520at 4968.663 kb on + strand, within ABZR88_RS20520at 4968.664 kb on - strand, within ABZR88_RS20520at 4968.729 kb on - strand, within ABZR88_RS20520at 4968.927 kb on + strand, within ABZR88_RS20520at 4969.305 kb on + strandat 4969.419 kb on + strand, within ABZR88_RS20525at 4969.690 kb on - strand, within ABZR88_RS20525at 4969.757 kb on + strand, within ABZR88_RS20525at 4969.822 kb on + strand, within ABZR88_RS20525at 4969.969 kb on - strandat 4969.969 kb on - strandat 4970.108 kb on + strandat 4970.114 kb on - strandat 4970.248 kb on + strandat 4970.249 kb on - strandat 4970.249 kb on - strandat 4970.249 kb on - strandat 4970.273 kb on + strandat 4970.281 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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4,967,280 + ABZR88_RS20515 0.53 +0.3
4,967,707 + ABZR88_RS20515 0.78 +0.2
4,967,707 + ABZR88_RS20515 0.78 +0.9
4,967,712 + ABZR88_RS20515 0.79 +0.7
4,967,712 + ABZR88_RS20515 0.79 -0.6
4,967,713 - ABZR88_RS20515 0.79 -0.5
4,967,901 + +2.2
4,968,085 - +0.7
4,968,099 - +0.5
4,968,357 - ABZR88_RS20520 0.11 +0.3
4,968,563 - ABZR88_RS20520 0.30 +0.0
4,968,663 + ABZR88_RS20520 0.39 -0.3
4,968,664 - ABZR88_RS20520 0.39 -0.3
4,968,729 - ABZR88_RS20520 0.45 +0.0
4,968,927 + ABZR88_RS20520 0.63 -0.1
4,969,305 + +0.3
4,969,419 + ABZR88_RS20525 0.14 +0.3
4,969,690 - ABZR88_RS20525 0.56 -0.3
4,969,757 + ABZR88_RS20525 0.67 +1.4
4,969,822 + ABZR88_RS20525 0.77 -0.3
4,969,969 - +0.2
4,969,969 - +0.1
4,970,108 + +0.1
4,970,114 - +0.1
4,970,248 + -0.0
4,970,249 - +0.1
4,970,249 - -2.3
4,970,249 - +1.1
4,970,273 + -0.1
4,970,281 + -0.1

Or see this region's nucleotide sequence