Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS20515 and ABZR88_RS20520 are separated by 171 nucleotides ABZR88_RS20520 and ABZR88_RS20525 overlap by 4 nucleotides ABZR88_RS20525 and ABZR88_RS20530 are separated by 221 nucleotides
ABZR88_RS20515: ABZR88_RS20515 - alkaline phosphatase PafA, at 4,966,409 to 4,968,064
_RS20515
ABZR88_RS20520: ABZR88_RS20520 - acyl-CoA dehydrogenase, at 4,968,236 to 4,969,336
_RS20520
ABZR88_RS20525: ABZR88_RS20525 - nicotinamide riboside transporter PnuC, at 4,969,333 to 4,969,965
_RS20525
ABZR88_RS20530: ABZR88_RS20530 - TonB-dependent receptor, at 4,970,187 to 4,972,580
_RS20530
Position (kb)
4968
4969
4970 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4967.280 kb on + strand, within ABZR88_RS20515 at 4967.707 kb on + strand, within ABZR88_RS20515 at 4967.707 kb on + strand, within ABZR88_RS20515 at 4967.712 kb on + strand, within ABZR88_RS20515 at 4967.712 kb on + strand, within ABZR88_RS20515 at 4967.713 kb on - strand, within ABZR88_RS20515 at 4967.901 kb on + strand at 4968.085 kb on - strand at 4968.099 kb on - strand at 4968.357 kb on - strand, within ABZR88_RS20520 at 4968.563 kb on - strand, within ABZR88_RS20520 at 4968.663 kb on + strand, within ABZR88_RS20520 at 4968.664 kb on - strand, within ABZR88_RS20520 at 4968.729 kb on - strand, within ABZR88_RS20520 at 4968.927 kb on + strand, within ABZR88_RS20520 at 4969.305 kb on + strand at 4969.419 kb on + strand, within ABZR88_RS20525 at 4969.690 kb on - strand, within ABZR88_RS20525 at 4969.757 kb on + strand, within ABZR88_RS20525 at 4969.822 kb on + strand, within ABZR88_RS20525 at 4969.969 kb on - strand at 4969.969 kb on - strand at 4970.108 kb on + strand at 4970.114 kb on - strand at 4970.248 kb on + strand at 4970.249 kb on - strand at 4970.249 kb on - strand at 4970.249 kb on - strand at 4970.273 kb on + strand at 4970.281 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 4,967,280 + ABZR88_RS20515 0.53 +0.3 4,967,707 + ABZR88_RS20515 0.78 +0.2 4,967,707 + ABZR88_RS20515 0.78 +0.9 4,967,712 + ABZR88_RS20515 0.79 +0.7 4,967,712 + ABZR88_RS20515 0.79 -0.6 4,967,713 - ABZR88_RS20515 0.79 -0.5 4,967,901 + +2.2 4,968,085 - +0.7 4,968,099 - +0.5 4,968,357 - ABZR88_RS20520 0.11 +0.3 4,968,563 - ABZR88_RS20520 0.30 +0.0 4,968,663 + ABZR88_RS20520 0.39 -0.3 4,968,664 - ABZR88_RS20520 0.39 -0.3 4,968,729 - ABZR88_RS20520 0.45 +0.0 4,968,927 + ABZR88_RS20520 0.63 -0.1 4,969,305 + +0.3 4,969,419 + ABZR88_RS20525 0.14 +0.3 4,969,690 - ABZR88_RS20525 0.56 -0.3 4,969,757 + ABZR88_RS20525 0.67 +1.4 4,969,822 + ABZR88_RS20525 0.77 -0.3 4,969,969 - +0.2 4,969,969 - +0.1 4,970,108 + +0.1 4,970,114 - +0.1 4,970,248 + -0.0 4,970,249 - +0.1 4,970,249 - -2.3 4,970,249 - +1.1 4,970,273 + -0.1 4,970,281 + -0.1
Or see this region's nucleotide sequence