Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS20025 and ABZR88_RS20030 are separated by 9 nucleotides ABZR88_RS20030 and ABZR88_RS20035 are separated by 99 nucleotides ABZR88_RS20035 and ABZR88_RS20040 are separated by 3 nucleotides
ABZR88_RS20025: ABZR88_RS20025 - peptidoglycan DD-metalloendopeptidase family protein, at 4,865,177 to 4,865,863
_RS20025
ABZR88_RS20030: ABZR88_RS20030 - ribosome-binding factor A, at 4,865,873 to 4,866,244
_RS20030
ABZR88_RS20035: ABZR88_RS20035 - hypothetical protein, at 4,866,344 to 4,866,760
_RS20035
ABZR88_RS20040: ABZR88_RS20040 - ABC transporter permease, at 4,866,764 to 4,867,990
_RS20040
Position (kb) 4866
4867 Strain fitness (log2 ratio) -1
0
1 at 4865.408 kb on + strand, within ABZR88_RS20025 at 4865.468 kb on - strand, within ABZR88_RS20025 at 4865.612 kb on - strand, within ABZR88_RS20025 at 4865.630 kb on - strand, within ABZR88_RS20025 at 4865.795 kb on - strand at 4865.795 kb on - strand at 4866.311 kb on + strand at 4866.437 kb on + strand, within ABZR88_RS20035 at 4866.438 kb on - strand, within ABZR88_RS20035 at 4866.448 kb on + strand, within ABZR88_RS20035 at 4866.523 kb on - strand, within ABZR88_RS20035 at 4866.574 kb on + strand, within ABZR88_RS20035 at 4866.589 kb on - strand, within ABZR88_RS20035 at 4866.603 kb on - strand, within ABZR88_RS20035 at 4866.603 kb on - strand, within ABZR88_RS20035 at 4866.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 4,865,408 + ABZR88_RS20025 0.34 +0.3 4,865,468 - ABZR88_RS20025 0.42 -0.2 4,865,612 - ABZR88_RS20025 0.63 +0.2 4,865,630 - ABZR88_RS20025 0.66 +0.1 4,865,795 - -0.1 4,865,795 - +0.9 4,866,311 + -0.3 4,866,437 + ABZR88_RS20035 0.22 +0.6 4,866,438 - ABZR88_RS20035 0.23 +0.2 4,866,448 + ABZR88_RS20035 0.25 +0.4 4,866,523 - ABZR88_RS20035 0.43 +0.6 4,866,574 + ABZR88_RS20035 0.55 +0.6 4,866,589 - ABZR88_RS20035 0.59 +0.5 4,866,603 - ABZR88_RS20035 0.62 +0.1 4,866,603 - ABZR88_RS20035 0.62 -1.1 4,866,752 - -0.0
Or see this region's nucleotide sequence