Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS15870

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS15860 and ABZR88_RS15865 are separated by 61 nucleotidesABZR88_RS15865 and ABZR88_RS15870 are separated by 184 nucleotidesABZR88_RS15870 and ABZR88_RS15875 are separated by 182 nucleotides ABZR88_RS15860: ABZR88_RS15860 - DUF6089 family protein, at 3,912,558 to 3,913,418 _RS15860 ABZR88_RS15865: ABZR88_RS15865 - MerR family transcriptional regulator, at 3,913,480 to 3,913,815 _RS15865 ABZR88_RS15870: ABZR88_RS15870 - CoA transferase subunit A, at 3,914,000 to 3,914,698 _RS15870 ABZR88_RS15875: ABZR88_RS15875 - MBL fold metallo-hydrolase, at 3,914,881 to 3,915,720 _RS15875 Position (kb) 3913 3914 3915Strain fitness (log2 ratio) -1 0 1at 3913.147 kb on - strand, within ABZR88_RS15860at 3913.199 kb on - strand, within ABZR88_RS15860at 3913.365 kb on + strandat 3913.410 kb on + strandat 3913.470 kb on - strandat 3913.489 kb on - strandat 3913.573 kb on + strand, within ABZR88_RS15865at 3913.693 kb on - strand, within ABZR88_RS15865at 3913.835 kb on - strandat 3913.921 kb on + strandat 3914.015 kb on + strandat 3914.016 kb on - strandat 3914.073 kb on + strand, within ABZR88_RS15870at 3914.074 kb on - strand, within ABZR88_RS15870at 3914.092 kb on + strand, within ABZR88_RS15870at 3914.094 kb on + strand, within ABZR88_RS15870at 3914.094 kb on + strand, within ABZR88_RS15870at 3914.146 kb on + strand, within ABZR88_RS15870at 3914.313 kb on - strand, within ABZR88_RS15870at 3914.359 kb on + strand, within ABZR88_RS15870at 3914.396 kb on - strand, within ABZR88_RS15870at 3914.396 kb on - strand, within ABZR88_RS15870at 3914.435 kb on + strand, within ABZR88_RS15870at 3914.718 kb on + strandat 3914.857 kb on - strandat 3915.162 kb on + strand, within ABZR88_RS15875at 3915.376 kb on - strand, within ABZR88_RS15875at 3915.552 kb on + strand, within ABZR88_RS15875at 3915.552 kb on + strand, within ABZR88_RS15875at 3915.552 kb on + strand, within ABZR88_RS15875at 3915.553 kb on - strand, within ABZR88_RS15875at 3915.553 kb on - strand, within ABZR88_RS15875

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,913,147 - ABZR88_RS15860 0.68 -0.3
3,913,199 - ABZR88_RS15860 0.74 +0.1
3,913,365 + -0.1
3,913,410 + -0.1
3,913,470 - -0.3
3,913,489 - -0.6
3,913,573 + ABZR88_RS15865 0.28 -0.4
3,913,693 - ABZR88_RS15865 0.63 +0.6
3,913,835 - +0.4
3,913,921 + +0.4
3,914,015 + +0.3
3,914,016 - +0.2
3,914,073 + ABZR88_RS15870 0.10 +0.3
3,914,074 - ABZR88_RS15870 0.11 +0.3
3,914,092 + ABZR88_RS15870 0.13 +1.3
3,914,094 + ABZR88_RS15870 0.13 -0.7
3,914,094 + ABZR88_RS15870 0.13 -0.1
3,914,146 + ABZR88_RS15870 0.21 +0.1
3,914,313 - ABZR88_RS15870 0.45 -0.3
3,914,359 + ABZR88_RS15870 0.51 +0.0
3,914,396 - ABZR88_RS15870 0.57 -0.7
3,914,396 - ABZR88_RS15870 0.57 -0.5
3,914,435 + ABZR88_RS15870 0.62 +0.1
3,914,718 + -0.8
3,914,857 - -0.1
3,915,162 + ABZR88_RS15875 0.33 +0.4
3,915,376 - ABZR88_RS15875 0.59 -1.0
3,915,552 + ABZR88_RS15875 0.80 +0.9
3,915,552 + ABZR88_RS15875 0.80 -0.5
3,915,552 + ABZR88_RS15875 0.80 -0.8
3,915,553 - ABZR88_RS15875 0.80 -0.3
3,915,553 - ABZR88_RS15875 0.80 -0.1

Or see this region's nucleotide sequence