Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS15860 and ABZR88_RS15865 are separated by 61 nucleotides ABZR88_RS15865 and ABZR88_RS15870 are separated by 184 nucleotides ABZR88_RS15870 and ABZR88_RS15875 are separated by 182 nucleotides
ABZR88_RS15860: ABZR88_RS15860 - DUF6089 family protein, at 3,912,558 to 3,913,418
_RS15860
ABZR88_RS15865: ABZR88_RS15865 - MerR family transcriptional regulator, at 3,913,480 to 3,913,815
_RS15865
ABZR88_RS15870: ABZR88_RS15870 - CoA transferase subunit A, at 3,914,000 to 3,914,698
_RS15870
ABZR88_RS15875: ABZR88_RS15875 - MBL fold metallo-hydrolase, at 3,914,881 to 3,915,720
_RS15875
Position (kb)
3913
3914
3915 Strain fitness (log2 ratio)
-1
0
1 at 3913.147 kb on - strand, within ABZR88_RS15860 at 3913.199 kb on - strand, within ABZR88_RS15860 at 3913.365 kb on + strand at 3913.410 kb on + strand at 3913.470 kb on - strand at 3913.489 kb on - strand at 3913.573 kb on + strand, within ABZR88_RS15865 at 3913.693 kb on - strand, within ABZR88_RS15865 at 3913.835 kb on - strand at 3913.921 kb on + strand at 3914.015 kb on + strand at 3914.016 kb on - strand at 3914.073 kb on + strand, within ABZR88_RS15870 at 3914.074 kb on - strand, within ABZR88_RS15870 at 3914.092 kb on + strand, within ABZR88_RS15870 at 3914.094 kb on + strand, within ABZR88_RS15870 at 3914.094 kb on + strand, within ABZR88_RS15870 at 3914.146 kb on + strand, within ABZR88_RS15870 at 3914.313 kb on - strand, within ABZR88_RS15870 at 3914.359 kb on + strand, within ABZR88_RS15870 at 3914.396 kb on - strand, within ABZR88_RS15870 at 3914.396 kb on - strand, within ABZR88_RS15870 at 3914.435 kb on + strand, within ABZR88_RS15870 at 3914.718 kb on + strand at 3914.857 kb on - strand at 3915.162 kb on + strand, within ABZR88_RS15875 at 3915.376 kb on - strand, within ABZR88_RS15875 at 3915.552 kb on + strand, within ABZR88_RS15875 at 3915.552 kb on + strand, within ABZR88_RS15875 at 3915.552 kb on + strand, within ABZR88_RS15875 at 3915.553 kb on - strand, within ABZR88_RS15875 at 3915.553 kb on - strand, within ABZR88_RS15875
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,913,147 - ABZR88_RS15860 0.68 -0.3 3,913,199 - ABZR88_RS15860 0.74 +0.1 3,913,365 + -0.1 3,913,410 + -0.1 3,913,470 - -0.3 3,913,489 - -0.6 3,913,573 + ABZR88_RS15865 0.28 -0.4 3,913,693 - ABZR88_RS15865 0.63 +0.6 3,913,835 - +0.4 3,913,921 + +0.4 3,914,015 + +0.3 3,914,016 - +0.2 3,914,073 + ABZR88_RS15870 0.10 +0.3 3,914,074 - ABZR88_RS15870 0.11 +0.3 3,914,092 + ABZR88_RS15870 0.13 +1.3 3,914,094 + ABZR88_RS15870 0.13 -0.7 3,914,094 + ABZR88_RS15870 0.13 -0.1 3,914,146 + ABZR88_RS15870 0.21 +0.1 3,914,313 - ABZR88_RS15870 0.45 -0.3 3,914,359 + ABZR88_RS15870 0.51 +0.0 3,914,396 - ABZR88_RS15870 0.57 -0.7 3,914,396 - ABZR88_RS15870 0.57 -0.5 3,914,435 + ABZR88_RS15870 0.62 +0.1 3,914,718 + -0.8 3,914,857 - -0.1 3,915,162 + ABZR88_RS15875 0.33 +0.4 3,915,376 - ABZR88_RS15875 0.59 -1.0 3,915,552 + ABZR88_RS15875 0.80 +0.9 3,915,552 + ABZR88_RS15875 0.80 -0.5 3,915,552 + ABZR88_RS15875 0.80 -0.8 3,915,553 - ABZR88_RS15875 0.80 -0.3 3,915,553 - ABZR88_RS15875 0.80 -0.1
Or see this region's nucleotide sequence