Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS13040 and ABZR88_RS13045 overlap by 1 nucleotides ABZR88_RS13045 and ABZR88_RS13050 are separated by 8 nucleotides
ABZR88_RS13040: ABZR88_RS13040 - glucuronate isomerase, at 3,221,598 to 3,223,010
_RS13040
ABZR88_RS13045: ABZR88_RS13045 - enolase C-terminal domain-like protein, at 3,223,010 to 3,224,137
_RS13045
ABZR88_RS13050: ABZR88_RS13050 - GntR family transcriptional regulator, at 3,224,146 to 3,225,153
_RS13050
Position (kb)
3223
3224
3225 Strain fitness (log2 ratio)
-1
0
1 at 3222.158 kb on + strand, within ABZR88_RS13040 at 3222.256 kb on + strand, within ABZR88_RS13040 at 3222.353 kb on - strand, within ABZR88_RS13040 at 3222.468 kb on + strand, within ABZR88_RS13040 at 3222.519 kb on - strand, within ABZR88_RS13040 at 3222.626 kb on + strand, within ABZR88_RS13040 at 3222.678 kb on - strand, within ABZR88_RS13040 at 3222.794 kb on + strand, within ABZR88_RS13040 at 3222.913 kb on - strand at 3222.934 kb on + strand at 3222.957 kb on + strand at 3222.990 kb on + strand at 3223.037 kb on - strand at 3223.111 kb on + strand at 3223.207 kb on + strand, within ABZR88_RS13045 at 3223.237 kb on + strand, within ABZR88_RS13045 at 3223.343 kb on - strand, within ABZR88_RS13045 at 3223.397 kb on - strand, within ABZR88_RS13045 at 3223.522 kb on + strand, within ABZR88_RS13045 at 3223.540 kb on + strand, within ABZR88_RS13045 at 3223.541 kb on - strand, within ABZR88_RS13045 at 3223.583 kb on + strand, within ABZR88_RS13045 at 3223.584 kb on - strand, within ABZR88_RS13045 at 3223.584 kb on - strand, within ABZR88_RS13045 at 3223.651 kb on - strand, within ABZR88_RS13045 at 3223.674 kb on + strand, within ABZR88_RS13045 at 3223.771 kb on - strand, within ABZR88_RS13045 at 3223.948 kb on - strand, within ABZR88_RS13045 at 3224.097 kb on - strand at 3224.122 kb on + strand at 3224.125 kb on + strand at 3224.158 kb on - strand at 3224.301 kb on + strand, within ABZR88_RS13050 at 3224.396 kb on + strand, within ABZR88_RS13050 at 3224.533 kb on + strand, within ABZR88_RS13050 at 3224.738 kb on + strand, within ABZR88_RS13050 at 3224.836 kb on - strand, within ABZR88_RS13050 at 3224.878 kb on - strand, within ABZR88_RS13050 at 3224.939 kb on + strand, within ABZR88_RS13050 at 3224.939 kb on + strand, within ABZR88_RS13050 at 3224.944 kb on + strand, within ABZR88_RS13050 at 3225.016 kb on - strand, within ABZR88_RS13050
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,222,158 + ABZR88_RS13040 0.40 +1.2 3,222,256 + ABZR88_RS13040 0.47 +0.2 3,222,353 - ABZR88_RS13040 0.53 -1.0 3,222,468 + ABZR88_RS13040 0.62 +0.0 3,222,519 - ABZR88_RS13040 0.65 -0.1 3,222,626 + ABZR88_RS13040 0.73 -0.2 3,222,678 - ABZR88_RS13040 0.76 -0.4 3,222,794 + ABZR88_RS13040 0.85 -0.0 3,222,913 - -1.0 3,222,934 + +0.2 3,222,957 + +0.1 3,222,990 + +0.7 3,223,037 - -0.0 3,223,111 + -0.1 3,223,207 + ABZR88_RS13045 0.17 -0.3 3,223,237 + ABZR88_RS13045 0.20 -0.3 3,223,343 - ABZR88_RS13045 0.30 -0.6 3,223,397 - ABZR88_RS13045 0.34 -0.2 3,223,522 + ABZR88_RS13045 0.45 +0.1 3,223,540 + ABZR88_RS13045 0.47 -0.3 3,223,541 - ABZR88_RS13045 0.47 -0.1 3,223,583 + ABZR88_RS13045 0.51 -0.2 3,223,584 - ABZR88_RS13045 0.51 -0.2 3,223,584 - ABZR88_RS13045 0.51 +0.0 3,223,651 - ABZR88_RS13045 0.57 -0.1 3,223,674 + ABZR88_RS13045 0.59 -0.0 3,223,771 - ABZR88_RS13045 0.67 -0.1 3,223,948 - ABZR88_RS13045 0.83 +1.3 3,224,097 - +1.4 3,224,122 + -0.1 3,224,125 + +0.1 3,224,158 - +0.3 3,224,301 + ABZR88_RS13050 0.15 -0.7 3,224,396 + ABZR88_RS13050 0.25 -0.1 3,224,533 + ABZR88_RS13050 0.38 +0.3 3,224,738 + ABZR88_RS13050 0.59 -0.2 3,224,836 - ABZR88_RS13050 0.68 -0.1 3,224,878 - ABZR88_RS13050 0.73 -0.6 3,224,939 + ABZR88_RS13050 0.79 -0.2 3,224,939 + ABZR88_RS13050 0.79 +0.1 3,224,944 + ABZR88_RS13050 0.79 +0.1 3,225,016 - ABZR88_RS13050 0.86 -0.3
Or see this region's nucleotide sequence