Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS06190

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS06185 and ABZR88_RS06190 are separated by 175 nucleotidesABZR88_RS06190 and ABZR88_RS06195 are separated by 171 nucleotides ABZR88_RS06185: ABZR88_RS06185 - bifunctional aldolase/short-chain dehydrogenase, at 1,525,372 to 1,527,492 _RS06185 ABZR88_RS06190: ABZR88_RS06190 - L-rhamnose mutarotase, at 1,527,668 to 1,527,982 _RS06190 ABZR88_RS06195: ABZR88_RS06195 - TIM barrel protein, at 1,528,154 to 1,529,428 _RS06195 Position (kb) 1527 1528Strain fitness (log2 ratio) -2 -1 0 1 2at 1526.736 kb on + strand, within ABZR88_RS06185at 1526.749 kb on - strand, within ABZR88_RS06185at 1526.882 kb on + strand, within ABZR88_RS06185at 1527.023 kb on - strand, within ABZR88_RS06185at 1527.023 kb on - strand, within ABZR88_RS06185at 1527.036 kb on - strand, within ABZR88_RS06185at 1527.536 kb on + strandat 1527.565 kb on - strandat 1527.903 kb on - strand, within ABZR88_RS06190at 1527.903 kb on - strand, within ABZR88_RS06190at 1527.980 kb on + strandat 1527.980 kb on + strandat 1528.033 kb on + strandat 1528.119 kb on - strandat 1528.119 kb on - strandat 1528.227 kb on - strandat 1528.309 kb on - strand, within ABZR88_RS06195at 1528.365 kb on + strand, within ABZR88_RS06195at 1528.436 kb on - strand, within ABZR88_RS06195at 1528.492 kb on - strand, within ABZR88_RS06195at 1528.597 kb on + strand, within ABZR88_RS06195at 1528.788 kb on + strand, within ABZR88_RS06195at 1528.793 kb on + strand, within ABZR88_RS06195

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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1,526,736 + ABZR88_RS06185 0.64 +0.6
1,526,749 - ABZR88_RS06185 0.65 -0.0
1,526,882 + ABZR88_RS06185 0.71 +0.3
1,527,023 - ABZR88_RS06185 0.78 +0.2
1,527,023 - ABZR88_RS06185 0.78 +0.4
1,527,036 - ABZR88_RS06185 0.78 +0.3
1,527,536 + +0.1
1,527,565 - +0.1
1,527,903 - ABZR88_RS06190 0.75 -1.0
1,527,903 - ABZR88_RS06190 0.75 +0.3
1,527,980 + -0.1
1,527,980 + -1.3
1,528,033 + +0.6
1,528,119 - +0.3
1,528,119 - -0.3
1,528,227 - +0.0
1,528,309 - ABZR88_RS06195 0.12 -0.1
1,528,365 + ABZR88_RS06195 0.17 -0.0
1,528,436 - ABZR88_RS06195 0.22 +0.4
1,528,492 - ABZR88_RS06195 0.27 -0.4
1,528,597 + ABZR88_RS06195 0.35 +2.0
1,528,788 + ABZR88_RS06195 0.50 -1.8
1,528,793 + ABZR88_RS06195 0.50 -0.3

Or see this region's nucleotide sequence