Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS00145

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS00135 and ABZR88_RS00140 are separated by 271 nucleotidesABZR88_RS00140 and ABZR88_RS00145 are separated by 143 nucleotidesABZR88_RS00145 and ABZR88_RS00150 are separated by 12 nucleotidesABZR88_RS00150 and ABZR88_RS00155 are separated by 15 nucleotides ABZR88_RS00135: ABZR88_RS00135 - HIT family protein, at 22,629 to 23,045 _RS00135 ABZR88_RS00140: ABZR88_RS00140 - AAA family ATPase, at 23,317 to 23,853 _RS00140 ABZR88_RS00145: ABZR88_RS00145 - DUF177 domain-containing protein, at 23,997 to 24,521 _RS00145 ABZR88_RS00150: ABZR88_RS00150 - 50S ribosomal protein L32, at 24,534 to 24,725 _RS00150 ABZR88_RS00155: ABZR88_RS00155 - phosphate acyltransferase PlsX, at 24,741 to 25,682 _RS00155 Position (kb) 23 24 25Strain fitness (log2 ratio) -1 0 1at 23.269 kb on - strandat 23.296 kb on + strandat 23.465 kb on + strand, within ABZR88_RS00140at 23.466 kb on - strand, within ABZR88_RS00140at 23.560 kb on - strand, within ABZR88_RS00140at 23.647 kb on + strand, within ABZR88_RS00140at 23.769 kb on - strand, within ABZR88_RS00140at 23.774 kb on + strand, within ABZR88_RS00140at 24.015 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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23,269 - -0.1
23,296 + -0.2
23,465 + ABZR88_RS00140 0.28 +0.1
23,466 - ABZR88_RS00140 0.28 +0.1
23,560 - ABZR88_RS00140 0.45 -0.1
23,647 + ABZR88_RS00140 0.61 +0.4
23,769 - ABZR88_RS00140 0.84 +0.7
23,774 + ABZR88_RS00140 0.85 -0.1
24,015 + -0.0

Or see this region's nucleotide sequence