Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS14295

Experiment: L-Arabinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS14285 and ABZR88_RS14290 overlap by 1 nucleotidesABZR88_RS14290 and ABZR88_RS14295 are separated by 37 nucleotidesABZR88_RS14295 and ABZR88_RS14300 overlap by 29 nucleotides ABZR88_RS14285: ABZR88_RS14285 - glycosyltransferase family 2 protein, at 3,547,847 to 3,548,674 _RS14285 ABZR88_RS14290: ABZR88_RS14290 - nucleotide-diphospho-sugar transferase, at 3,548,674 to 3,549,591 _RS14290 ABZR88_RS14295: ABZR88_RS14295 - DUF5672 family protein, at 3,549,629 to 3,550,411 _RS14295 ABZR88_RS14300: ABZR88_RS14300 - glycosyltransferase family 2 protein, at 3,550,383 to 3,551,309 _RS14300 Position (kb) 3549 3550 3551Strain fitness (log2 ratio) -1 0 1 2at 3548.648 kb on - strandat 3548.673 kb on - strandat 3548.693 kb on + strandat 3548.925 kb on + strand, within ABZR88_RS14290at 3549.048 kb on - strand, within ABZR88_RS14290at 3549.093 kb on + strand, within ABZR88_RS14290at 3549.100 kb on + strand, within ABZR88_RS14290at 3549.125 kb on + strand, within ABZR88_RS14290at 3549.126 kb on - strand, within ABZR88_RS14290at 3549.257 kb on - strand, within ABZR88_RS14290at 3549.354 kb on + strand, within ABZR88_RS14290at 3549.437 kb on - strand, within ABZR88_RS14290at 3549.517 kb on - strandat 3549.632 kb on + strandat 3549.633 kb on - strandat 3549.634 kb on + strandat 3549.641 kb on - strandat 3549.641 kb on - strandat 3549.730 kb on - strand, within ABZR88_RS14295at 3550.059 kb on - strand, within ABZR88_RS14295at 3550.105 kb on - strand, within ABZR88_RS14295at 3550.195 kb on + strand, within ABZR88_RS14295at 3550.200 kb on + strand, within ABZR88_RS14295at 3550.202 kb on - strand, within ABZR88_RS14295at 3550.352 kb on + strandat 3550.354 kb on + strandat 3550.555 kb on + strand, within ABZR88_RS14300at 3550.556 kb on - strand, within ABZR88_RS14300at 3550.557 kb on + strand, within ABZR88_RS14300at 3550.685 kb on - strand, within ABZR88_RS14300at 3550.706 kb on + strand, within ABZR88_RS14300at 3551.219 kb on - strandat 3551.264 kb on + strandat 3551.275 kb on - strandat 3551.277 kb on - strandat 3551.284 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose (C)
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3,548,648 - -0.1
3,548,673 - +0.1
3,548,693 + -0.3
3,548,925 + ABZR88_RS14290 0.27 -0.5
3,549,048 - ABZR88_RS14290 0.41 -0.0
3,549,093 + ABZR88_RS14290 0.46 -0.1
3,549,100 + ABZR88_RS14290 0.46 -0.6
3,549,125 + ABZR88_RS14290 0.49 -0.4
3,549,126 - ABZR88_RS14290 0.49 -0.1
3,549,257 - ABZR88_RS14290 0.64 -0.5
3,549,354 + ABZR88_RS14290 0.74 -0.9
3,549,437 - ABZR88_RS14290 0.83 -0.3
3,549,517 - -0.1
3,549,632 + -0.9
3,549,633 - -0.5
3,549,634 + -0.4
3,549,641 - +0.0
3,549,641 - -0.1
3,549,730 - ABZR88_RS14295 0.13 +0.6
3,550,059 - ABZR88_RS14295 0.55 +0.4
3,550,105 - ABZR88_RS14295 0.61 -0.2
3,550,195 + ABZR88_RS14295 0.72 +0.1
3,550,200 + ABZR88_RS14295 0.73 -0.3
3,550,202 - ABZR88_RS14295 0.73 +2.2
3,550,352 + -0.2
3,550,354 + -0.0
3,550,555 + ABZR88_RS14300 0.19 -0.6
3,550,556 - ABZR88_RS14300 0.19 -0.1
3,550,557 + ABZR88_RS14300 0.19 -0.4
3,550,685 - ABZR88_RS14300 0.33 -0.0
3,550,706 + ABZR88_RS14300 0.35 -0.0
3,551,219 - -0.5
3,551,264 + -0.3
3,551,275 - -0.0
3,551,277 - +0.2
3,551,284 - -0.0

Or see this region's nucleotide sequence