Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS07460

Experiment: L-Arabinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS07450 and ABZR88_RS07455 are separated by 285 nucleotidesABZR88_RS07455 and ABZR88_RS07460 are separated by 99 nucleotidesABZR88_RS07460 and ABZR88_RS07465 are separated by 18 nucleotidesABZR88_RS07465 and ABZR88_RS07470 are separated by 195 nucleotides ABZR88_RS07450: ABZR88_RS07450 - hypothetical protein, at 1,861,476 to 1,863,860 _RS07450 ABZR88_RS07455: ABZR88_RS07455 - helix-turn-helix domain-containing protein, at 1,864,146 to 1,864,385 _RS07455 ABZR88_RS07460: ABZR88_RS07460 - hypothetical protein, at 1,864,485 to 1,864,697 _RS07460 ABZR88_RS07465: ABZR88_RS07465 - hypothetical protein, at 1,864,716 to 1,865,072 _RS07465 ABZR88_RS07470: ABZR88_RS07470 - IS21-like element helper ATPase IstB, at 1,865,268 to 1,866,029 _RS07470 Position (kb) 1864 1865Strain fitness (log2 ratio) -2 -1 0 1 2at 1863.513 kb on + strand, within ABZR88_RS07450at 1863.514 kb on - strand, within ABZR88_RS07450at 1863.571 kb on + strand, within ABZR88_RS07450at 1863.937 kb on + strandat 1863.940 kb on + strandat 1863.946 kb on + strandat 1864.091 kb on + strandat 1864.296 kb on + strand, within ABZR88_RS07455at 1864.297 kb on - strand, within ABZR88_RS07455at 1864.350 kb on - strand, within ABZR88_RS07455at 1864.464 kb on + strandat 1864.464 kb on + strandat 1864.495 kb on - strandat 1864.507 kb on + strand, within ABZR88_RS07460at 1864.536 kb on - strand, within ABZR88_RS07460at 1864.598 kb on + strand, within ABZR88_RS07460at 1864.699 kb on + strandat 1864.700 kb on - strandat 1864.765 kb on + strand, within ABZR88_RS07465at 1864.770 kb on + strand, within ABZR88_RS07465at 1864.799 kb on - strand, within ABZR88_RS07465at 1864.811 kb on + strand, within ABZR88_RS07465at 1864.843 kb on - strand, within ABZR88_RS07465at 1864.969 kb on + strand, within ABZR88_RS07465at 1864.970 kb on - strand, within ABZR88_RS07465at 1865.052 kb on - strandat 1865.078 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose (C)
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1,863,513 + ABZR88_RS07450 0.85 +0.4
1,863,514 - ABZR88_RS07450 0.85 -0.1
1,863,571 + ABZR88_RS07450 0.88 +0.2
1,863,937 + -0.3
1,863,940 + -0.1
1,863,946 + +2.6
1,864,091 + -0.0
1,864,296 + ABZR88_RS07455 0.62 -0.4
1,864,297 - ABZR88_RS07455 0.63 -0.1
1,864,350 - ABZR88_RS07455 0.85 -0.5
1,864,464 + -0.6
1,864,464 + -0.5
1,864,495 - -0.2
1,864,507 + ABZR88_RS07460 0.10 -0.4
1,864,536 - ABZR88_RS07460 0.24 +0.2
1,864,598 + ABZR88_RS07460 0.53 +0.7
1,864,699 + -0.2
1,864,700 - -0.1
1,864,765 + ABZR88_RS07465 0.14 -0.4
1,864,770 + ABZR88_RS07465 0.15 -1.2
1,864,799 - ABZR88_RS07465 0.23 -0.3
1,864,811 + ABZR88_RS07465 0.27 -0.2
1,864,843 - ABZR88_RS07465 0.36 -0.5
1,864,969 + ABZR88_RS07465 0.71 -0.2
1,864,970 - ABZR88_RS07465 0.71 -0.2
1,865,052 - -1.9
1,865,078 - +0.0

Or see this region's nucleotide sequence