Experiment: NLDM_defined low phosphorus; midlog
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS11985 and LRK53_RS11990 are separated by 93 nucleotides LRK53_RS11990 and LRK53_RS11995 are separated by 159 nucleotides
LRK53_RS11985: LRK53_RS11985 - signal peptidase I, at 2,671,372 to 2,672,268
_RS11985
LRK53_RS11990: LRK53_RS11990 - translation elongation factor 4, at 2,672,362 to 2,674,155
_RS11990
LRK53_RS11995: LRK53_RS11995 - Do family serine endopeptidase, at 2,674,315 to 2,675,787
_RS11995
Position (kb)
2672
2673
2674
2675 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2672.364 kb on - strand at 2672.492 kb on + strand at 2672.492 kb on + strand at 2672.744 kb on + strand, within LRK53_RS11990 at 2672.744 kb on + strand, within LRK53_RS11990 at 2672.744 kb on + strand, within LRK53_RS11990 at 2672.744 kb on + strand, within LRK53_RS11990 at 2672.759 kb on + strand, within LRK53_RS11990 at 2672.825 kb on + strand, within LRK53_RS11990 at 2672.825 kb on + strand, within LRK53_RS11990 at 2672.825 kb on + strand, within LRK53_RS11990 at 2672.826 kb on - strand, within LRK53_RS11990 at 2672.826 kb on - strand, within LRK53_RS11990 at 2672.852 kb on + strand, within LRK53_RS11990 at 2672.852 kb on + strand, within LRK53_RS11990 at 2672.852 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.912 kb on + strand, within LRK53_RS11990 at 2672.913 kb on - strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.041 kb on + strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.042 kb on - strand, within LRK53_RS11990 at 2673.080 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.548 kb on + strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.549 kb on - strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.806 kb on + strand, within LRK53_RS11990 at 2673.807 kb on - strand, within LRK53_RS11990 at 2673.807 kb on - strand, within LRK53_RS11990 at 2673.807 kb on - strand, within LRK53_RS11990 at 2673.807 kb on - strand, within LRK53_RS11990 at 2673.807 kb on - strand, within LRK53_RS11990 at 2673.899 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.944 kb on + strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.945 kb on - strand, within LRK53_RS11990 at 2673.968 kb on + strand, within LRK53_RS11990 at 2673.968 kb on + strand, within LRK53_RS11990 at 2673.969 kb on - strand, within LRK53_RS11990 at 2673.969 kb on - strand, within LRK53_RS11990 at 2674.381 kb on + strand at 2674.382 kb on - strand at 2674.382 kb on - strand at 2674.382 kb on - strand at 2674.382 kb on - strand at 2674.582 kb on + strand, within LRK53_RS11995 at 2674.582 kb on + strand, within LRK53_RS11995 at 2674.582 kb on + strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.583 kb on - strand, within LRK53_RS11995 at 2674.799 kb on + strand, within LRK53_RS11995 at 2674.799 kb on + strand, within LRK53_RS11995 at 2674.800 kb on - strand, within LRK53_RS11995 at 2674.800 kb on - strand, within LRK53_RS11995 at 2674.867 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.961 kb on + strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2674.962 kb on - strand, within LRK53_RS11995 at 2675.033 kb on + strand, within LRK53_RS11995 at 2675.033 kb on + strand, within LRK53_RS11995 at 2675.034 kb on - strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.051 kb on + strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.052 kb on - strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.153 kb on + strand, within LRK53_RS11995 at 2675.154 kb on - strand, within LRK53_RS11995 at 2675.154 kb on - strand, within LRK53_RS11995 at 2675.154 kb on - strand, within LRK53_RS11995 at 2675.154 kb on - strand, within LRK53_RS11995 at 2675.154 kb on - strand, within LRK53_RS11995
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined low phosphorus; midlog remove 2,672,364 - -0.0 2,672,492 + -2.7 2,672,492 + -1.7 2,672,744 + LRK53_RS11990 0.21 -1.2 2,672,744 + LRK53_RS11990 0.21 -0.7 2,672,744 + LRK53_RS11990 0.21 -1.2 2,672,744 + LRK53_RS11990 0.21 +0.1 2,672,759 + LRK53_RS11990 0.22 +0.8 2,672,825 + LRK53_RS11990 0.26 -1.5 2,672,825 + LRK53_RS11990 0.26 -0.3 2,672,825 + LRK53_RS11990 0.26 +2.7 2,672,826 - LRK53_RS11990 0.26 -1.9 2,672,826 - LRK53_RS11990 0.26 -0.5 2,672,852 + LRK53_RS11990 0.27 -0.2 2,672,852 + LRK53_RS11990 0.27 -1.2 2,672,852 + LRK53_RS11990 0.27 -0.5 2,672,912 + LRK53_RS11990 0.31 +1.4 2,672,912 + LRK53_RS11990 0.31 +2.7 2,672,912 + LRK53_RS11990 0.31 -0.6 2,672,912 + LRK53_RS11990 0.31 -0.9 2,672,912 + LRK53_RS11990 0.31 -1.5 2,672,912 + LRK53_RS11990 0.31 -0.9 2,672,912 + LRK53_RS11990 0.31 +1.5 2,672,912 + LRK53_RS11990 0.31 -1.4 2,672,912 + LRK53_RS11990 0.31 -1.3 2,672,912 + LRK53_RS11990 0.31 -1.9 2,672,913 - LRK53_RS11990 0.31 +1.1 2,673,041 + LRK53_RS11990 0.38 -0.1 2,673,041 + LRK53_RS11990 0.38 -1.7 2,673,041 + LRK53_RS11990 0.38 -1.2 2,673,041 + LRK53_RS11990 0.38 -0.6 2,673,041 + LRK53_RS11990 0.38 -1.0 2,673,041 + LRK53_RS11990 0.38 -2.2 2,673,041 + LRK53_RS11990 0.38 -0.3 2,673,041 + LRK53_RS11990 0.38 -0.9 2,673,041 + LRK53_RS11990 0.38 +0.1 2,673,041 + LRK53_RS11990 0.38 +2.1 2,673,041 + LRK53_RS11990 0.38 +0.7 2,673,041 + LRK53_RS11990 0.38 -0.5 2,673,041 + LRK53_RS11990 0.38 -1.8 2,673,041 + LRK53_RS11990 0.38 +1.1 2,673,041 + LRK53_RS11990 0.38 +0.1 2,673,041 + LRK53_RS11990 0.38 +0.1 2,673,041 + LRK53_RS11990 0.38 -1.5 2,673,041 + LRK53_RS11990 0.38 +0.3 2,673,041 + LRK53_RS11990 0.38 +1.8 2,673,042 - LRK53_RS11990 0.38 +0.1 2,673,042 - LRK53_RS11990 0.38 +1.1 2,673,042 - LRK53_RS11990 0.38 -1.0 2,673,042 - LRK53_RS11990 0.38 +2.1 2,673,042 - LRK53_RS11990 0.38 -0.1 2,673,042 - LRK53_RS11990 0.38 -0.2 2,673,042 - LRK53_RS11990 0.38 +0.1 2,673,080 + LRK53_RS11990 0.40 -2.1 2,673,548 + LRK53_RS11990 0.66 +0.1 2,673,548 + LRK53_RS11990 0.66 -1.4 2,673,548 + LRK53_RS11990 0.66 -0.5 2,673,548 + LRK53_RS11990 0.66 +0.4 2,673,548 + LRK53_RS11990 0.66 -0.5 2,673,548 + LRK53_RS11990 0.66 -2.2 2,673,548 + LRK53_RS11990 0.66 -0.9 2,673,548 + LRK53_RS11990 0.66 -1.2 2,673,549 - LRK53_RS11990 0.66 -0.5 2,673,549 - LRK53_RS11990 0.66 -1.7 2,673,549 - LRK53_RS11990 0.66 -0.1 2,673,549 - LRK53_RS11990 0.66 -1.1 2,673,549 - LRK53_RS11990 0.66 +0.2 2,673,549 - LRK53_RS11990 0.66 -1.7 2,673,806 + LRK53_RS11990 0.80 -0.5 2,673,806 + LRK53_RS11990 0.80 -0.9 2,673,806 + LRK53_RS11990 0.80 -0.2 2,673,806 + LRK53_RS11990 0.80 -0.9 2,673,806 + LRK53_RS11990 0.80 +2.1 2,673,806 + LRK53_RS11990 0.80 -0.5 2,673,807 - LRK53_RS11990 0.81 -1.5 2,673,807 - LRK53_RS11990 0.81 -0.9 2,673,807 - LRK53_RS11990 0.81 +0.1 2,673,807 - LRK53_RS11990 0.81 -1.9 2,673,807 - LRK53_RS11990 0.81 -0.9 2,673,899 + LRK53_RS11990 0.86 +1.1 2,673,944 + LRK53_RS11990 0.88 -0.5 2,673,944 + LRK53_RS11990 0.88 -0.6 2,673,944 + LRK53_RS11990 0.88 +0.4 2,673,944 + LRK53_RS11990 0.88 +0.3 2,673,944 + LRK53_RS11990 0.88 -0.1 2,673,944 + LRK53_RS11990 0.88 -1.8 2,673,944 + LRK53_RS11990 0.88 +1.1 2,673,945 - LRK53_RS11990 0.88 -1.9 2,673,945 - LRK53_RS11990 0.88 -2.5 2,673,945 - LRK53_RS11990 0.88 -0.9 2,673,945 - LRK53_RS11990 0.88 +2.1 2,673,945 - LRK53_RS11990 0.88 +3.1 2,673,945 - LRK53_RS11990 0.88 -2.2 2,673,945 - LRK53_RS11990 0.88 +3.1 2,673,945 - LRK53_RS11990 0.88 -2.2 2,673,945 - LRK53_RS11990 0.88 +0.8 2,673,945 - LRK53_RS11990 0.88 -1.5 2,673,945 - LRK53_RS11990 0.88 -0.3 2,673,945 - LRK53_RS11990 0.88 +1.1 2,673,945 - LRK53_RS11990 0.88 +1.7 2,673,968 + LRK53_RS11990 0.90 +0.1 2,673,968 + LRK53_RS11990 0.90 -1.2 2,673,969 - LRK53_RS11990 0.90 -1.5 2,673,969 - LRK53_RS11990 0.90 -1.7 2,674,381 + +0.8 2,674,382 - +0.2 2,674,382 - +1.2 2,674,382 - -1.2 2,674,382 - +0.8 2,674,582 + LRK53_RS11995 0.18 -0.9 2,674,582 + LRK53_RS11995 0.18 +2.4 2,674,582 + LRK53_RS11995 0.18 +1.1 2,674,583 - LRK53_RS11995 0.18 -1.2 2,674,583 - LRK53_RS11995 0.18 -1.2 2,674,583 - LRK53_RS11995 0.18 -1.3 2,674,583 - LRK53_RS11995 0.18 +1.7 2,674,583 - LRK53_RS11995 0.18 -0.7 2,674,583 - LRK53_RS11995 0.18 -2.1 2,674,799 + LRK53_RS11995 0.33 -0.9 2,674,799 + LRK53_RS11995 0.33 -2.1 2,674,800 - LRK53_RS11995 0.33 -1.1 2,674,800 - LRK53_RS11995 0.33 +1.7 2,674,867 + LRK53_RS11995 0.37 +0.5 2,674,961 + LRK53_RS11995 0.44 -0.1 2,674,961 + LRK53_RS11995 0.44 -0.3 2,674,961 + LRK53_RS11995 0.44 +1.1 2,674,961 + LRK53_RS11995 0.44 +3.7 2,674,961 + LRK53_RS11995 0.44 -0.2 2,674,961 + LRK53_RS11995 0.44 +0.3 2,674,961 + LRK53_RS11995 0.44 -0.5 2,674,961 + LRK53_RS11995 0.44 -0.4 2,674,961 + LRK53_RS11995 0.44 -1.5 2,674,961 + LRK53_RS11995 0.44 +0.1 2,674,961 + LRK53_RS11995 0.44 -2.6 2,674,962 - LRK53_RS11995 0.44 +0.5 2,674,962 - LRK53_RS11995 0.44 +1.0 2,674,962 - LRK53_RS11995 0.44 -0.2 2,674,962 - LRK53_RS11995 0.44 -0.5 2,674,962 - LRK53_RS11995 0.44 -0.6 2,674,962 - LRK53_RS11995 0.44 +1.3 2,674,962 - LRK53_RS11995 0.44 -0.4 2,674,962 - LRK53_RS11995 0.44 +1.1 2,674,962 - LRK53_RS11995 0.44 -0.9 2,674,962 - LRK53_RS11995 0.44 -0.4 2,675,033 + LRK53_RS11995 0.49 +0.3 2,675,033 + LRK53_RS11995 0.49 +0.1 2,675,034 - LRK53_RS11995 0.49 -0.3 2,675,051 + LRK53_RS11995 0.50 +0.3 2,675,051 + LRK53_RS11995 0.50 +0.2 2,675,051 + LRK53_RS11995 0.50 -0.9 2,675,051 + LRK53_RS11995 0.50 -0.5 2,675,051 + LRK53_RS11995 0.50 -1.1 2,675,051 + LRK53_RS11995 0.50 -1.2 2,675,051 + LRK53_RS11995 0.50 +1.5 2,675,051 + LRK53_RS11995 0.50 +1.1 2,675,051 + LRK53_RS11995 0.50 -2.1 2,675,051 + LRK53_RS11995 0.50 +1.9 2,675,051 + LRK53_RS11995 0.50 +0.7 2,675,052 - LRK53_RS11995 0.50 +1.0 2,675,052 - LRK53_RS11995 0.50 -0.2 2,675,052 - LRK53_RS11995 0.50 +2.1 2,675,052 - LRK53_RS11995 0.50 -0.4 2,675,052 - LRK53_RS11995 0.50 -0.2 2,675,052 - LRK53_RS11995 0.50 +0.1 2,675,052 - LRK53_RS11995 0.50 -1.7 2,675,052 - LRK53_RS11995 0.50 -1.7 2,675,052 - LRK53_RS11995 0.50 -2.1 2,675,052 - LRK53_RS11995 0.50 +1.1 2,675,052 - LRK53_RS11995 0.50 -0.5 2,675,052 - LRK53_RS11995 0.50 -1.2 2,675,153 + LRK53_RS11995 0.57 -0.1 2,675,153 + LRK53_RS11995 0.57 +0.1 2,675,153 + LRK53_RS11995 0.57 +0.6 2,675,153 + LRK53_RS11995 0.57 -0.1 2,675,153 + LRK53_RS11995 0.57 -0.7 2,675,153 + LRK53_RS11995 0.57 -0.2 2,675,153 + LRK53_RS11995 0.57 -1.0 2,675,154 - LRK53_RS11995 0.57 +1.1 2,675,154 - LRK53_RS11995 0.57 +0.4 2,675,154 - LRK53_RS11995 0.57 +0.1 2,675,154 - LRK53_RS11995 0.57 +0.4 2,675,154 - LRK53_RS11995 0.57 +0.8
Or see this region's nucleotide sequence