Experiment: NLDM_defined low phosphorus; midlog
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS11175 and LRK53_RS11180 overlap by 4 nucleotides LRK53_RS11180 and LRK53_RS11185 are separated by 151 nucleotides
LRK53_RS11175: LRK53_RS11175 - outer membrane protein assembly factor BamB, at 2,494,340 to 2,495,551
_RS11175
LRK53_RS11180: LRK53_RS11180 - tetratricopeptide repeat protein, at 2,495,548 to 2,496,198
_RS11180
LRK53_RS11185: LRK53_RS11185 - DUF4115 domain-containing protein, at 2,496,350 to 2,497,285
_RS11185
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2495.649 kb on - strand, within LRK53_RS11180 at 2495.649 kb on - strand, within LRK53_RS11180 at 2495.690 kb on - strand, within LRK53_RS11180 at 2495.690 kb on - strand, within LRK53_RS11180 at 2495.723 kb on + strand, within LRK53_RS11180 at 2495.723 kb on + strand, within LRK53_RS11180 at 2495.723 kb on + strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.724 kb on - strand, within LRK53_RS11180 at 2495.948 kb on + strand, within LRK53_RS11180 at 2495.948 kb on + strand, within LRK53_RS11180 at 2495.948 kb on + strand, within LRK53_RS11180 at 2495.948 kb on + strand, within LRK53_RS11180 at 2495.948 kb on + strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2495.949 kb on - strand, within LRK53_RS11180 at 2496.026 kb on + strand, within LRK53_RS11180 at 2496.026 kb on + strand, within LRK53_RS11180 at 2496.026 kb on + strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.027 kb on - strand, within LRK53_RS11180 at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.173 kb on + strand at 2496.174 kb on - strand at 2496.174 kb on - strand at 2496.174 kb on - strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.182 kb on + strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.183 kb on - strand at 2496.311 kb on + strand at 2496.312 kb on - strand at 2496.312 kb on - strand at 2496.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined low phosphorus; midlog remove 2,495,649 - LRK53_RS11180 0.16 -0.6 2,495,649 - LRK53_RS11180 0.16 +2.3 2,495,690 - LRK53_RS11180 0.22 +0.7 2,495,690 - LRK53_RS11180 0.22 +0.1 2,495,723 + LRK53_RS11180 0.27 -1.2 2,495,723 + LRK53_RS11180 0.27 -2.9 2,495,723 + LRK53_RS11180 0.27 +1.1 2,495,724 - LRK53_RS11180 0.27 -0.2 2,495,724 - LRK53_RS11180 0.27 +0.5 2,495,724 - LRK53_RS11180 0.27 +1.1 2,495,724 - LRK53_RS11180 0.27 +0.2 2,495,724 - LRK53_RS11180 0.27 +1.1 2,495,724 - LRK53_RS11180 0.27 -1.7 2,495,724 - LRK53_RS11180 0.27 -1.1 2,495,724 - LRK53_RS11180 0.27 -1.2 2,495,724 - LRK53_RS11180 0.27 -0.9 2,495,724 - LRK53_RS11180 0.27 -0.5 2,495,724 - LRK53_RS11180 0.27 -0.8 2,495,724 - LRK53_RS11180 0.27 -0.5 2,495,724 - LRK53_RS11180 0.27 -0.3 2,495,948 + LRK53_RS11180 0.61 -0.9 2,495,948 + LRK53_RS11180 0.61 -0.9 2,495,948 + LRK53_RS11180 0.61 -2.1 2,495,948 + LRK53_RS11180 0.61 +0.1 2,495,948 + LRK53_RS11180 0.61 -1.9 2,495,949 - LRK53_RS11180 0.62 -1.9 2,495,949 - LRK53_RS11180 0.62 -0.6 2,495,949 - LRK53_RS11180 0.62 -0.9 2,495,949 - LRK53_RS11180 0.62 -1.2 2,495,949 - LRK53_RS11180 0.62 -0.8 2,495,949 - LRK53_RS11180 0.62 +0.1 2,495,949 - LRK53_RS11180 0.62 +1.1 2,496,026 + LRK53_RS11180 0.73 +0.1 2,496,026 + LRK53_RS11180 0.73 +0.1 2,496,026 + LRK53_RS11180 0.73 +1.7 2,496,027 - LRK53_RS11180 0.74 -0.9 2,496,027 - LRK53_RS11180 0.74 +0.2 2,496,027 - LRK53_RS11180 0.74 +1.1 2,496,027 - LRK53_RS11180 0.74 +0.3 2,496,027 - LRK53_RS11180 0.74 -0.5 2,496,027 - LRK53_RS11180 0.74 -0.7 2,496,027 - LRK53_RS11180 0.74 -0.7 2,496,027 - LRK53_RS11180 0.74 +1.5 2,496,027 - LRK53_RS11180 0.74 -2.1 2,496,027 - LRK53_RS11180 0.74 -1.8 2,496,027 - LRK53_RS11180 0.74 -1.4 2,496,027 - LRK53_RS11180 0.74 -1.9 2,496,027 - LRK53_RS11180 0.74 -0.1 2,496,027 - LRK53_RS11180 0.74 -0.5 2,496,027 - LRK53_RS11180 0.74 -1.5 2,496,173 + -2.1 2,496,173 + +0.8 2,496,173 + +1.7 2,496,173 + +0.1 2,496,173 + -2.1 2,496,173 + -0.9 2,496,173 + -2.8 2,496,173 + -1.3 2,496,173 + -2.8 2,496,174 - -1.7 2,496,174 - +0.4 2,496,174 - -0.3 2,496,182 + +1.1 2,496,182 + -0.8 2,496,182 + -1.9 2,496,182 + -0.5 2,496,182 + +0.5 2,496,182 + +1.1 2,496,182 + +0.1 2,496,183 - -1.9 2,496,183 - +1.5 2,496,183 - -0.2 2,496,183 - +0.2 2,496,183 - +0.1 2,496,183 - +0.1 2,496,183 - -1.9 2,496,183 - +1.1 2,496,183 - -2.1 2,496,311 + -0.2 2,496,312 - +2.1 2,496,312 - +0.8 2,496,319 - -0.4
Or see this region's nucleotide sequence