Experiment: NLDM_defined low phosphorus; midlog
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS08815 and LRK53_RS08820 overlap by 1 nucleotides LRK53_RS08820 and LRK53_RS08825 are separated by 108 nucleotides LRK53_RS08825 and LRK53_RS08830 are separated by 19 nucleotides
LRK53_RS08815: LRK53_RS08815 - DNA polymerase III subunit gamma/tau, at 1,979,698 to 1,981,377
_RS08815
LRK53_RS08820: LRK53_RS08820 - YbaB/EbfC family nucleoid-associated protein, at 1,981,377 to 1,981,700
_RS08820
LRK53_RS08825: LRK53_RS08825 - recombination mediator RecR, at 1,981,809 to 1,982,408
_RS08825
LRK53_RS08830: LRK53_RS08830 - histidine triad nucleotide-binding protein, at 1,982,428 to 1,982,772
_RS08830
Position (kb) 1981
1982 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1981.351 kb on + strand at 1981.351 kb on + strand at 1981.351 kb on + strand at 1981.351 kb on + strand at 1981.352 kb on - strand at 1981.352 kb on - strand at 1981.352 kb on - strand at 1981.352 kb on - strand at 1981.352 kb on - strand at 1981.352 kb on - strand at 1981.534 kb on + strand, within LRK53_RS08820 at 1981.534 kb on + strand, within LRK53_RS08820 at 1981.535 kb on - strand, within LRK53_RS08820 at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.734 kb on + strand at 1981.735 kb on - strand at 1981.735 kb on - strand at 1981.735 kb on - strand at 1981.735 kb on - strand at 1981.735 kb on - strand at 1982.118 kb on + strand, within LRK53_RS08825 at 1982.118 kb on + strand, within LRK53_RS08825 at 1982.119 kb on - strand, within LRK53_RS08825 at 1982.119 kb on - strand, within LRK53_RS08825 at 1982.271 kb on + strand, within LRK53_RS08825 at 1982.271 kb on + strand, within LRK53_RS08825 at 1982.271 kb on + strand, within LRK53_RS08825 at 1982.271 kb on + strand, within LRK53_RS08825 at 1982.272 kb on - strand, within LRK53_RS08825 at 1982.272 kb on - strand, within LRK53_RS08825 at 1982.272 kb on - strand, within LRK53_RS08825 at 1982.352 kb on + strand at 1982.352 kb on + strand at 1982.352 kb on + strand at 1982.352 kb on + strand at 1982.352 kb on + strand at 1982.353 kb on - strand at 1982.353 kb on - strand at 1982.353 kb on - strand at 1982.353 kb on - strand at 1982.353 kb on - strand at 1982.353 kb on - strand at 1982.410 kb on + strand at 1982.427 kb on + strand at 1982.427 kb on + strand at 1982.427 kb on + strand at 1982.428 kb on - strand at 1982.428 kb on - strand at 1982.428 kb on - strand at 1982.428 kb on - strand at 1982.428 kb on - strand at 1982.428 kb on - strand at 1982.485 kb on + strand, within LRK53_RS08830 at 1982.485 kb on + strand, within LRK53_RS08830 at 1982.485 kb on + strand, within LRK53_RS08830 at 1982.486 kb on - strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.543 kb on + strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830 at 1982.544 kb on - strand, within LRK53_RS08830
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined low phosphorus; midlog remove 1,981,351 + -1.2 1,981,351 + +0.2 1,981,351 + -0.7 1,981,351 + +1.1 1,981,352 - -0.4 1,981,352 - -1.1 1,981,352 - +0.4 1,981,352 - +0.5 1,981,352 - -0.1 1,981,352 - -1.5 1,981,534 + LRK53_RS08820 0.48 -0.5 1,981,534 + LRK53_RS08820 0.48 +1.1 1,981,535 - LRK53_RS08820 0.49 -2.3 1,981,734 + -1.2 1,981,734 + +0.5 1,981,734 + +0.1 1,981,734 + -0.5 1,981,734 + -1.2 1,981,734 + -1.8 1,981,734 + -0.4 1,981,734 + -0.9 1,981,734 + -0.3 1,981,735 - -0.1 1,981,735 - +0.8 1,981,735 - -0.2 1,981,735 - +0.2 1,981,735 - -3.7 1,982,118 + LRK53_RS08825 0.52 -1.8 1,982,118 + LRK53_RS08825 0.52 +0.8 1,982,119 - LRK53_RS08825 0.52 -0.1 1,982,119 - LRK53_RS08825 0.52 +0.1 1,982,271 + LRK53_RS08825 0.77 -2.1 1,982,271 + LRK53_RS08825 0.77 -0.6 1,982,271 + LRK53_RS08825 0.77 +0.4 1,982,271 + LRK53_RS08825 0.77 +0.8 1,982,272 - LRK53_RS08825 0.77 +0.1 1,982,272 - LRK53_RS08825 0.77 +0.2 1,982,272 - LRK53_RS08825 0.77 -1.0 1,982,352 + -1.0 1,982,352 + -0.2 1,982,352 + +0.1 1,982,352 + +0.4 1,982,352 + +0.4 1,982,353 - +2.1 1,982,353 - +2.5 1,982,353 - -2.2 1,982,353 - -1.5 1,982,353 - -0.5 1,982,353 - -2.1 1,982,410 + -2.6 1,982,427 + -1.5 1,982,427 + -0.9 1,982,427 + +1.1 1,982,428 - -0.1 1,982,428 - -1.0 1,982,428 - +1.0 1,982,428 - +0.1 1,982,428 - -1.9 1,982,428 - -0.1 1,982,485 + LRK53_RS08830 0.17 -0.8 1,982,485 + LRK53_RS08830 0.17 +0.5 1,982,485 + LRK53_RS08830 0.17 -0.2 1,982,486 - LRK53_RS08830 0.17 -0.7 1,982,543 + LRK53_RS08830 0.33 -1.7 1,982,543 + LRK53_RS08830 0.33 +1.8 1,982,543 + LRK53_RS08830 0.33 +0.4 1,982,543 + LRK53_RS08830 0.33 -0.6 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -0.7 1,982,543 + LRK53_RS08830 0.33 +2.1 1,982,543 + LRK53_RS08830 0.33 +0.7 1,982,543 + LRK53_RS08830 0.33 -0.3 1,982,543 + LRK53_RS08830 0.33 +1.1 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -0.0 1,982,543 + LRK53_RS08830 0.33 -1.7 1,982,543 + LRK53_RS08830 0.33 -1.7 1,982,543 + LRK53_RS08830 0.33 +0.1 1,982,543 + LRK53_RS08830 0.33 +0.1 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 -0.2 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 +1.8 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 -1.1 1,982,543 + LRK53_RS08830 0.33 -1.9 1,982,543 + LRK53_RS08830 0.33 +1.6 1,982,543 + LRK53_RS08830 0.33 +0.6 1,982,543 + LRK53_RS08830 0.33 -0.9 1,982,543 + LRK53_RS08830 0.33 -1.6 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -0.3 1,982,543 + LRK53_RS08830 0.33 +0.6 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -0.6 1,982,543 + LRK53_RS08830 0.33 -0.4 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 -2.7 1,982,543 + LRK53_RS08830 0.33 -0.4 1,982,543 + LRK53_RS08830 0.33 +1.5 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 +0.6 1,982,543 + LRK53_RS08830 0.33 +0.1 1,982,543 + LRK53_RS08830 0.33 +0.1 1,982,543 + LRK53_RS08830 0.33 +0.7 1,982,543 + LRK53_RS08830 0.33 +1.4 1,982,543 + LRK53_RS08830 0.33 +1.8 1,982,543 + LRK53_RS08830 0.33 -0.7 1,982,543 + LRK53_RS08830 0.33 -1.7 1,982,543 + LRK53_RS08830 0.33 +1.1 1,982,543 + LRK53_RS08830 0.33 -1.1 1,982,543 + LRK53_RS08830 0.33 -1.7 1,982,543 + LRK53_RS08830 0.33 -1.4 1,982,543 + LRK53_RS08830 0.33 +1.7 1,982,543 + LRK53_RS08830 0.33 -2.6 1,982,543 + LRK53_RS08830 0.33 -1.2 1,982,543 + LRK53_RS08830 0.33 +0.2 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 -0.3 1,982,543 + LRK53_RS08830 0.33 +1.1 1,982,543 + LRK53_RS08830 0.33 -0.9 1,982,543 + LRK53_RS08830 0.33 -1.1 1,982,543 + LRK53_RS08830 0.33 +0.7 1,982,543 + LRK53_RS08830 0.33 +1.3 1,982,543 + LRK53_RS08830 0.33 -0.7 1,982,543 + LRK53_RS08830 0.33 +0.8 1,982,543 + LRK53_RS08830 0.33 -1.6 1,982,543 + LRK53_RS08830 0.33 +2.1 1,982,543 + LRK53_RS08830 0.33 +0.1 1,982,543 + LRK53_RS08830 0.33 +0.5 1,982,543 + LRK53_RS08830 0.33 -1.9 1,982,543 + LRK53_RS08830 0.33 +0.2 1,982,543 + LRK53_RS08830 0.33 -0.5 1,982,543 + LRK53_RS08830 0.33 +1.1 1,982,543 + LRK53_RS08830 0.33 -1.1 1,982,543 + LRK53_RS08830 0.33 -1.0 1,982,543 + LRK53_RS08830 0.33 +0.3 1,982,543 + LRK53_RS08830 0.33 +0.2 1,982,543 + LRK53_RS08830 0.33 +0.0 1,982,544 - LRK53_RS08830 0.34 -0.3 1,982,544 - LRK53_RS08830 0.34 -1.0 1,982,544 - LRK53_RS08830 0.34 -0.9 1,982,544 - LRK53_RS08830 0.34 -1.5 1,982,544 - LRK53_RS08830 0.34 -0.7 1,982,544 - LRK53_RS08830 0.34 -0.9 1,982,544 - LRK53_RS08830 0.34 +0.7 1,982,544 - LRK53_RS08830 0.34 +0.5 1,982,544 - LRK53_RS08830 0.34 -0.2 1,982,544 - LRK53_RS08830 0.34 +1.7 1,982,544 - LRK53_RS08830 0.34 -1.3 1,982,544 - LRK53_RS08830 0.34 -0.4 1,982,544 - LRK53_RS08830 0.34 -1.9 1,982,544 - LRK53_RS08830 0.34 -0.3 1,982,544 - LRK53_RS08830 0.34 -0.2 1,982,544 - LRK53_RS08830 0.34 -1.2 1,982,544 - LRK53_RS08830 0.34 +1.7 1,982,544 - LRK53_RS08830 0.34 -0.1 1,982,544 - LRK53_RS08830 0.34 -0.6 1,982,544 - LRK53_RS08830 0.34 +0.4 1,982,544 - LRK53_RS08830 0.34 -0.3 1,982,544 - LRK53_RS08830 0.34 -0.2 1,982,544 - LRK53_RS08830 0.34 -2.5 1,982,544 - LRK53_RS08830 0.34 +0.5 1,982,544 - LRK53_RS08830 0.34 +1.1 1,982,544 - LRK53_RS08830 0.34 -0.4 1,982,544 - LRK53_RS08830 0.34 -0.3 1,982,544 - LRK53_RS08830 0.34 +1.1 1,982,544 - LRK53_RS08830 0.34 +0.7 1,982,544 - LRK53_RS08830 0.34 -1.2 1,982,544 - LRK53_RS08830 0.34 +0.1 1,982,544 - LRK53_RS08830 0.34 -0.6 1,982,544 - LRK53_RS08830 0.34 -1.2 1,982,544 - LRK53_RS08830 0.34 -2.5 1,982,544 - LRK53_RS08830 0.34 +0.8 1,982,544 - LRK53_RS08830 0.34 -0.7 1,982,544 - LRK53_RS08830 0.34 +0.1 1,982,544 - LRK53_RS08830 0.34 +0.4 1,982,544 - LRK53_RS08830 0.34 -1.2 1,982,544 - LRK53_RS08830 0.34 +0.5 1,982,544 - LRK53_RS08830 0.34 +0.5 1,982,544 - LRK53_RS08830 0.34 -0.1 1,982,544 - LRK53_RS08830 0.34 +0.2 1,982,544 - LRK53_RS08830 0.34 +1.1 1,982,544 - LRK53_RS08830 0.34 -1.2 1,982,544 - LRK53_RS08830 0.34 -0.2 1,982,544 - LRK53_RS08830 0.34 -0.2 1,982,544 - LRK53_RS08830 0.34 -0.6 1,982,544 - LRK53_RS08830 0.34 -0.5 1,982,544 - LRK53_RS08830 0.34 +1.4
Or see this region's nucleotide sequence