Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07995

Experiment: NLDM_defined low iron; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low iron; midlog
1,792,962	+		LRK53_RS07985	0.50	-0.4
1,792,962	+		LRK53_RS07985	0.50	+0.2
1,792,962	+		LRK53_RS07985	0.50	-0.7
1,792,962	+		LRK53_RS07985	0.50	-0.7
1,792,962	+		LRK53_RS07985	0.50	-1.6
1,792,962	+		LRK53_RS07985	0.50	-0.4
1,792,962	+		LRK53_RS07985	0.50	+3.0
1,792,962	+		LRK53_RS07985	0.50	-0.4
1,792,963	-		LRK53_RS07985	0.51	-1.6
1,792,963	-		LRK53_RS07985	0.51	-0.0
1,792,963	-		LRK53_RS07985	0.51	-1.4
1,792,963	-		LRK53_RS07985	0.51	-1.0
1,792,963	-		LRK53_RS07985	0.51	-0.4
1,793,174	+				-0.6
1,793,174	+				+0.0
1,793,210	+				+0.3
1,793,210	+				-1.0
1,793,210	+				+1.0
1,793,210	+				-0.7
1,793,210	+				+1.4
1,793,210	+				-1.0
1,793,210	+				-1.3
1,793,210	+				-0.6
1,793,210	+				+0.0
1,793,210	+				-0.0
1,793,210	+				+1.0
1,793,210	+				+2.1
1,793,210	+				-0.6
1,793,210	+				+0.5
1,793,211	-				-1.4
1,793,211	-				-1.1
1,793,211	-				+2.3
1,793,211	-				-0.0
1,793,237	+				-1.0
1,793,237	+				-0.0
1,793,237	+				-1.5
1,793,237	+				-0.7
1,793,237	+				+0.2
1,793,238	-				-1.6
1,793,238	-				+0.6
1,793,238	-				-0.5
1,793,238	-				-0.1
1,793,238	-				+2.2
1,793,238	-				+0.4
1,793,238	-				-1.4
1,793,327	+		LRK53_RS07990	0.21	-0.5
1,793,327	+		LRK53_RS07990	0.21	-0.2
1,793,327	+		LRK53_RS07990	0.21	-1.4
1,793,327	+		LRK53_RS07990	0.21	+1.4
1,793,328	-		LRK53_RS07990	0.21	+1.0
1,793,328	-		LRK53_RS07990	0.21	+0.3
1,793,328	-		LRK53_RS07990	0.21	+1.1
1,793,328	-		LRK53_RS07990	0.21	+0.1
1,793,355	+		LRK53_RS07990	0.26	+0.2
1,793,355	+		LRK53_RS07990	0.26	-0.0
1,793,355	+		LRK53_RS07990	0.26	-0.9
1,793,356	-		LRK53_RS07990	0.26	-0.9
1,793,495	+		LRK53_RS07990	0.49	+0.8
1,793,495	+		LRK53_RS07990	0.49	-1.4
1,793,495	+		LRK53_RS07990	0.49	+1.4
1,793,495	+		LRK53_RS07990	0.49	-1.2
1,793,495	+		LRK53_RS07990	0.49	+0.0
1,793,495	+		LRK53_RS07990	0.49	-0.8
1,793,495	+		LRK53_RS07990	0.49	+0.2
1,793,495	+		LRK53_RS07990	0.49	+0.6
1,793,495	+		LRK53_RS07990	0.49	-0.4
1,793,495	+		LRK53_RS07990	0.49	-0.3
1,793,495	+		LRK53_RS07990	0.49	-0.1
1,793,495	+		LRK53_RS07990	0.49	-0.6
1,793,495	+		LRK53_RS07990	0.49	-0.7
1,793,495	+		LRK53_RS07990	0.49	-1.6
1,793,495	+		LRK53_RS07990	0.49	-0.4
1,793,495	+		LRK53_RS07990	0.49	-0.9
1,793,496	-		LRK53_RS07990	0.49	-0.4
1,793,496	-		LRK53_RS07990	0.49	+1.0
1,793,496	-		LRK53_RS07990	0.49	-0.1
1,793,496	-		LRK53_RS07990	0.49	+1.0
1,793,496	-		LRK53_RS07990	0.49	+0.3
1,793,496	-		LRK53_RS07990	0.49	-1.4
1,793,496	-		LRK53_RS07990	0.49	+0.1
1,793,496	-		LRK53_RS07990	0.49	-0.4
1,793,496	-		LRK53_RS07990	0.49	+0.2
1,793,684	+		LRK53_RS07990	0.79	-1.1
1,793,684	+		LRK53_RS07990	0.79	-3.1
1,793,685	-		LRK53_RS07990	0.80	+1.7
1,793,685	-		LRK53_RS07990	0.80	+1.0
1,793,685	-		LRK53_RS07990	0.80	-0.5
1,793,685	-		LRK53_RS07990	0.80	-0.6
1,793,685	-		LRK53_RS07990	0.80	-0.7
1,793,685	-		LRK53_RS07990	0.80	+0.5
1,793,690	+		LRK53_RS07990	0.80	+1.0
1,793,690	+		LRK53_RS07990	0.80	+0.3
1,793,690	+		LRK53_RS07990	0.80	+1.0
1,793,690	+		LRK53_RS07990	0.80	-0.4
1,793,690	+		LRK53_RS07990	0.80	-2.6
1,793,690	+		LRK53_RS07990	0.80	+1.3
1,793,690	+		LRK53_RS07990	0.80	+0.4
1,793,690	+		LRK53_RS07990	0.80	+0.5
1,793,690	+		LRK53_RS07990	0.80	-0.0
1,793,690	+		LRK53_RS07990	0.80	-0.9
1,793,691	-		LRK53_RS07990	0.81	-0.9
1,793,691	-		LRK53_RS07990	0.81	+0.5
1,793,691	-		LRK53_RS07990	0.81	-0.6
1,793,691	-		LRK53_RS07990	0.81	-0.6
1,793,691	-		LRK53_RS07990	0.81	+0.2
1,793,691	-		LRK53_RS07990	0.81	-0.8
1,793,691	-		LRK53_RS07990	0.81	-0.0
1,793,691	-		LRK53_RS07990	0.81	+0.2
1,793,808	-				-0.6
1,793,808	-				-0.0
1,793,808	-				+0.4
1,793,890	+				-0.7
1,794,175	+		LRK53_RS07995	0.11	-0.0
1,794,175	+		LRK53_RS07995	0.11	-0.0
1,794,176	-		LRK53_RS07995	0.11	+2.6
1,794,176	-		LRK53_RS07995	0.11	-0.3
1,794,177	+		LRK53_RS07995	0.11	+0.6
1,794,178	-		LRK53_RS07995	0.11	+0.4
1,794,178	-		LRK53_RS07995	0.11	-1.6
1,794,598	+		LRK53_RS07995	0.30	+0.4
1,794,599	-		LRK53_RS07995	0.30	-0.5
1,794,599	-		LRK53_RS07995	0.30	+1.7
1,794,642	-		LRK53_RS07995	0.32	-1.4
1,794,691	+		LRK53_RS07995	0.34	-1.0
1,794,691	+		LRK53_RS07995	0.34	-0.2
1,794,691	+		LRK53_RS07995	0.34	-0.2
1,794,691	+		LRK53_RS07995	0.34	-0.3
1,794,692	-		LRK53_RS07995	0.34	-1.5
1,794,692	-		LRK53_RS07995	0.34	-0.6
1,794,715	+		LRK53_RS07995	0.35	+0.2
1,794,715	+		LRK53_RS07995	0.35	+0.6
1,794,716	-		LRK53_RS07995	0.35	+2.3
1,794,716	-		LRK53_RS07995	0.35	-0.6
1,794,752	-		LRK53_RS07995	0.36	-0.0
1,794,752	-		LRK53_RS07995	0.36	-0.5
1,794,752	-		LRK53_RS07995	0.36	-1.6
1,794,949	+		LRK53_RS07995	0.45	+1.0
1,794,976	+		LRK53_RS07995	0.46	+0.2
1,794,976	+		LRK53_RS07995	0.46	-2.7
1,794,976	+		LRK53_RS07995	0.46	+1.0
1,794,976	+		LRK53_RS07995	0.46	-0.6
1,794,977	-		LRK53_RS07995	0.46	-1.6
1,794,977	-		LRK53_RS07995	0.46	+0.4
1,795,076	-		LRK53_RS07995	0.51	-1.0
1,795,076	-		LRK53_RS07995	0.51	-0.4
1,795,231	+		LRK53_RS07995	0.57	+0.8
1,795,282	+		LRK53_RS07995	0.60	+1.0
1,795,283	-		LRK53_RS07995	0.60	+1.3
1,795,283	-		LRK53_RS07995	0.60	-1.2
1,795,283	-		LRK53_RS07995	0.60	+1.0
1,795,283	-		LRK53_RS07995	0.60	-1.2
1,795,283	-		LRK53_RS07995	0.60	-0.1
1,795,283	-		LRK53_RS07995	0.60	+0.2
1,795,283	-		LRK53_RS07995	0.60	-0.5
1,795,283	-		LRK53_RS07995	0.60	+0.7
1,795,283	-		LRK53_RS07995	0.60	-1.0
1,795,426	+		LRK53_RS07995	0.66	-0.6
1,795,426	+		LRK53_RS07995	0.66	+0.3
1,795,426	+		LRK53_RS07995	0.66	+0.4
1,795,426	+		LRK53_RS07995	0.66	-0.8
1,795,426	+		LRK53_RS07995	0.66	-0.0
1,795,426	+		LRK53_RS07995	0.66	-1.9
1,795,426	+		LRK53_RS07995	0.66	+1.0
1,795,426	+		LRK53_RS07995	0.66	+1.0
1,795,427	-		LRK53_RS07995	0.66	+0.4
1,795,427	-		LRK53_RS07995	0.66	-0.1
1,795,717	+		LRK53_RS07995	0.79	+1.0
1,795,717	+		LRK53_RS07995	0.79	-0.6
1,795,717	+		LRK53_RS07995	0.79	+1.3
1,795,717	+		LRK53_RS07995	0.79	+0.6
1,795,717	+		LRK53_RS07995	0.79	+0.2
1,795,717	+		LRK53_RS07995	0.79	+3.3
1,795,717	+		LRK53_RS07995	0.79	+2.0
1,795,717	+		LRK53_RS07995	0.79	-0.4
1,795,717	+		LRK53_RS07995	0.79	+0.2
1,795,717	+		LRK53_RS07995	0.79	-1.9
1,795,717	+		LRK53_RS07995	0.79	-0.0
1,795,717	+		LRK53_RS07995	0.79	+1.0
1,795,717	+		LRK53_RS07995	0.79	-0.0
1,795,717	+		LRK53_RS07995	0.79	+0.1
1,795,717	+		LRK53_RS07995	0.79	-1.1
1,795,717	+		LRK53_RS07995	0.79	+0.8
1,795,717	+		LRK53_RS07995	0.79	+1.7
1,795,717	+		LRK53_RS07995	0.79	+2.5
1,795,717	+		LRK53_RS07995	0.79	+1.0
1,795,718	-		LRK53_RS07995	0.79	+0.5
1,795,718	-		LRK53_RS07995	0.79	-0.8
1,795,718	-		LRK53_RS07995	0.79	-1.2
1,795,718	-		LRK53_RS07995	0.79	+1.0
1,795,718	-		LRK53_RS07995	0.79	-0.5
1,795,718	-		LRK53_RS07995	0.79	+1.0
1,795,718	-		LRK53_RS07995	0.79	+0.4
1,795,718	-		LRK53_RS07995	0.79	-1.0
1,795,718	-		LRK53_RS07995	0.79	-0.2
1,795,718	-		LRK53_RS07995	0.79	+0.4
1,795,718	-		LRK53_RS07995	0.79	-1.8
1,795,718	-		LRK53_RS07995	0.79	-0.0
1,795,735	+		LRK53_RS07995	0.80	+1.0
1,795,735	+		LRK53_RS07995	0.80	+1.5
1,795,736	-		LRK53_RS07995	0.80	-3.0
1,795,736	-		LRK53_RS07995	0.80	-0.0
1,795,736	-		LRK53_RS07995	0.80	-0.6
1,795,736	-		LRK53_RS07995	0.80	+1.3
1,795,736	-		LRK53_RS07995	0.80	+0.7
1,795,736	-		LRK53_RS07995	0.80	-0.2
1,795,736	-		LRK53_RS07995	0.80	+0.4
1,795,813	+		LRK53_RS07995	0.83	+2.5
1,795,813	+		LRK53_RS07995	0.83	-0.1
1,795,813	+		LRK53_RS07995	0.83	+0.4
1,795,814	-		LRK53_RS07995	0.83	-0.7
1,795,814	-		LRK53_RS07995	0.83	-0.6
1,795,814	-		LRK53_RS07995	0.83	+2.5
1,795,841	+		LRK53_RS07995	0.84	+1.0
1,795,841	+		LRK53_RS07995	0.84	+1.2
1,795,841	+		LRK53_RS07995	0.84	+1.0
1,795,841	+		LRK53_RS07995	0.84	-0.9
1,795,842	-		LRK53_RS07995	0.84	+2.0
1,795,842	-		LRK53_RS07995	0.84	+1.4
1,795,916	+		LRK53_RS07995	0.88	+0.5
1,795,916	+		LRK53_RS07995	0.88	-0.8
1,795,916	+		LRK53_RS07995	0.88	-0.6
1,795,917	-		LRK53_RS07995	0.88	-0.0
1,795,917	-		LRK53_RS07995	0.88	-0.3
1,795,917	-		LRK53_RS07995	0.88	-1.0
1,795,917	-		LRK53_RS07995	0.88	+1.6
1,796,255	+				+0.2
1,796,255	+				-0.2
1,796,255	+				-0.8
1,796,255	+				-0.0
1,796,255	+				-0.0
1,796,255	+				-1.4
1,796,255	+				-1.6
1,796,256	-				-0.0
1,796,256	-				-0.8
1,796,256	-				-0.3
1,796,256	-				-1.0
1,796,256	-				-0.1
1,796,256	-				+1.0
1,796,256	-				-2.2
1,796,256	-				-3.2
1,796,337	+				-0.7
1,796,337	+				-1.0
1,796,337	+				-0.5
1,796,337	+				-0.6
1,796,337	+				-0.8
1,796,337	+				-0.1
1,796,337	+				-0.0
1,796,337	+				-1.0
1,796,337	+				+0.3
1,796,337	+				+0.5
1,796,337	+				+0.8
1,796,337	+				-1.0
1,796,337	+				-0.9
1,796,337	+				-0.4
1,796,338	-				+0.5
1,796,338	-				-1.3
1,796,338	-				+0.7
1,796,338	-				-2.4
1,796,338	-				-0.0
1,796,338	-				-0.5
1,796,338	-				+0.2
1,796,338	-				+0.2
1,796,338	-				-2.5
1,796,338	-				-2.0
1,796,338	-				+0.4
1,796,338	-				-1.4
1,796,338	-				-1.6
1,796,338	-				-0.0
1,796,338	-				-2.5
1,796,338	-				-2.0
1,796,338	-				+1.0
1,796,444	+		LRK53_RS08000	0.12	-1.8
1,796,444	+		LRK53_RS08000	0.12	+1.5
1,796,445	-		LRK53_RS08000	0.12	-0.1
1,796,445	-		LRK53_RS08000	0.12	-0.6
1,796,713	+		LRK53_RS08000	0.27	-1.4
1,796,713	+		LRK53_RS08000	0.27	-0.3
1,796,714	-		LRK53_RS08000	0.27	-1.0
1,797,074	+		LRK53_RS08000	0.48	-0.3