Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12115

Experiment: NLDM_defined low iron; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low iron; midlog
2,696,975	+		LRK53_RS12110	0.27	-1.5
2,696,975	+		LRK53_RS12110	0.27	-1.5
2,696,975	+		LRK53_RS12110	0.27	-1.4
2,696,976	-		LRK53_RS12110	0.27	-0.7
2,696,976	-		LRK53_RS12110	0.27	-0.2
2,696,976	-		LRK53_RS12110	0.27	-0.3
2,697,035	+		LRK53_RS12110	0.32	-0.5
2,697,035	+		LRK53_RS12110	0.32	+0.4
2,697,035	+		LRK53_RS12110	0.32	+0.6
2,697,035	+		LRK53_RS12110	0.32	-1.0
2,697,035	+		LRK53_RS12110	0.32	+1.2
2,697,035	+		LRK53_RS12110	0.32	-0.2
2,697,035	+		LRK53_RS12110	0.32	+0.1
2,697,035	+		LRK53_RS12110	0.32	-1.0
2,697,035	+		LRK53_RS12110	0.32	-0.6
2,697,035	+		LRK53_RS12110	0.32	-0.1
2,697,036	-		LRK53_RS12110	0.32	+0.8
2,697,036	-		LRK53_RS12110	0.32	-0.5
2,697,036	-		LRK53_RS12110	0.32	-0.3
2,697,071	+		LRK53_RS12110	0.36	-0.4
2,697,071	+		LRK53_RS12110	0.36	+0.6
2,697,071	+		LRK53_RS12110	0.36	-0.0
2,697,077	+		LRK53_RS12110	0.36	+0.4
2,697,077	+		LRK53_RS12110	0.36	-1.6
2,697,077	+		LRK53_RS12110	0.36	+0.6
2,697,077	+		LRK53_RS12110	0.36	-1.0
2,697,077	+		LRK53_RS12110	0.36	-0.8
2,697,077	+		LRK53_RS12110	0.36	+0.7
2,697,077	+		LRK53_RS12110	0.36	-0.2
2,697,077	+		LRK53_RS12110	0.36	-0.6
2,697,077	+		LRK53_RS12110	0.36	+0.2
2,697,077	+		LRK53_RS12110	0.36	-0.3
2,697,077	+		LRK53_RS12110	0.36	-0.0
2,697,077	+		LRK53_RS12110	0.36	-1.4
2,697,077	+		LRK53_RS12110	0.36	-1.0
2,697,077	+		LRK53_RS12110	0.36	-0.5
2,697,077	+		LRK53_RS12110	0.36	-1.1
2,697,077	+		LRK53_RS12110	0.36	+0.8
2,697,077	+		LRK53_RS12110	0.36	-1.8
2,697,077	+		LRK53_RS12110	0.36	-0.2
2,697,077	+		LRK53_RS12110	0.36	-0.6
2,697,077	+		LRK53_RS12110	0.36	-0.6
2,697,077	+		LRK53_RS12110	0.36	+0.1
2,697,077	+		LRK53_RS12110	0.36	-0.7
2,697,078	-		LRK53_RS12110	0.36	+0.2
2,697,078	-		LRK53_RS12110	0.36	-1.4
2,697,078	-		LRK53_RS12110	0.36	+0.9
2,697,078	-		LRK53_RS12110	0.36	-0.6
2,697,078	-		LRK53_RS12110	0.36	-0.0
2,697,078	-		LRK53_RS12110	0.36	+0.1
2,697,078	-		LRK53_RS12110	0.36	-0.7
2,697,078	-		LRK53_RS12110	0.36	-0.0
2,697,078	-		LRK53_RS12110	0.36	+0.1
2,697,078	-		LRK53_RS12110	0.36	-0.4
2,697,078	-		LRK53_RS12110	0.36	+1.0
2,697,078	-		LRK53_RS12110	0.36	-1.0
2,697,078	-		LRK53_RS12110	0.36	-0.5
2,697,078	-		LRK53_RS12110	0.36	-0.6
2,697,078	-		LRK53_RS12110	0.36	-0.5
2,697,078	-		LRK53_RS12110	0.36	-1.3
2,697,078	-		LRK53_RS12110	0.36	-0.9
2,697,099	+		LRK53_RS12110	0.38	-0.0
2,697,099	+		LRK53_RS12110	0.38	-1.8
2,697,099	+		LRK53_RS12110	0.38	-1.2
2,697,099	+		LRK53_RS12110	0.38	+1.1
2,697,099	+		LRK53_RS12110	0.38	+0.0
2,697,099	+		LRK53_RS12110	0.38	-0.0
2,697,099	+		LRK53_RS12110	0.38	-0.4
2,697,099	+		LRK53_RS12110	0.38	-0.4
2,697,099	+		LRK53_RS12110	0.38	+0.6
2,697,099	+		LRK53_RS12110	0.38	-0.2
2,697,099	+		LRK53_RS12110	0.38	-1.2
2,697,099	+		LRK53_RS12110	0.38	+3.0
2,697,099	+		LRK53_RS12110	0.38	-1.5
2,697,099	+		LRK53_RS12110	0.38	-0.0
2,697,100	-		LRK53_RS12110	0.39	-0.7
2,697,100	-		LRK53_RS12110	0.39	-0.5
2,697,100	-		LRK53_RS12110	0.39	-1.5
2,697,100	-		LRK53_RS12110	0.39	-0.4
2,697,100	-		LRK53_RS12110	0.39	+1.0
2,697,100	-		LRK53_RS12110	0.39	-0.7
2,697,100	-		LRK53_RS12110	0.39	-2.2
2,697,100	-		LRK53_RS12110	0.39	+0.4
2,697,100	-		LRK53_RS12110	0.39	-2.0
2,697,100	-		LRK53_RS12110	0.39	-0.3
2,697,213	+		LRK53_RS12110	0.49	-0.5
2,697,213	+		LRK53_RS12110	0.49	-0.7
2,697,213	+		LRK53_RS12110	0.49	-0.7
2,697,213	+		LRK53_RS12110	0.49	-0.7
2,697,213	+		LRK53_RS12110	0.49	+1.0
2,697,213	+		LRK53_RS12110	0.49	-0.7
2,697,214	-		LRK53_RS12110	0.49	+2.0
2,697,214	-		LRK53_RS12110	0.49	-0.3
2,697,214	-		LRK53_RS12110	0.49	-0.0
2,697,214	-		LRK53_RS12110	0.49	-0.5
2,697,214	-		LRK53_RS12110	0.49	-0.0
2,697,214	-		LRK53_RS12110	0.49	-0.7
2,697,404	+		LRK53_RS12110	0.68	+0.1
2,697,404	+		LRK53_RS12110	0.68	+1.6
2,697,405	-		LRK53_RS12110	0.68	+0.6
2,697,405	-		LRK53_RS12110	0.68	+0.3
2,697,405	-		LRK53_RS12110	0.68	-1.0
2,697,405	-		LRK53_RS12110	0.68	-0.3
2,697,556	+		LRK53_RS12110	0.82	-0.4
2,697,557	-		LRK53_RS12110	0.82	-0.2
2,697,557	-		LRK53_RS12110	0.82	-0.8
2,697,599	+		LRK53_RS12110	0.86	-0.4
2,697,600	-		LRK53_RS12110	0.87	+1.1
2,697,600	-		LRK53_RS12110	0.87	+0.4
2,697,600	-		LRK53_RS12110	0.87	+0.3
2,697,679	-				+0.1
2,697,842	+				-0.0
2,697,842	+				+0.6
2,697,842	+				-0.7
2,697,842	+				-0.5
2,697,843	-				-1.1
2,697,843	-				+0.9
2,697,843	-				+0.4
2,697,843	-				-0.9
2,697,843	-				-1.6
2,697,843	-				-1.4
2,697,843	-				+1.0
2,697,843	-				+0.3
2,697,843	-				-0.6
2,697,843	-				-3.0
2,697,846	+				-0.6
2,697,847	-				-0.5
2,697,847	-				-0.0
2,697,847	-				+1.3
2,697,847	-				-1.2
2,697,847	-				-0.0
2,697,847	-				+0.2
2,697,847	-				-0.6
2,697,993	-				-1.9
2,697,993	-				-1.9
2,697,998	+				+2.0
2,697,999	-				-0.4
2,698,094	+				-1.4
2,698,094	+				-0.4
2,698,094	+				+1.4
2,698,094	+				-1.4
2,698,094	+				-2.6
2,698,094	+				+0.5
2,698,094	+				+1.3
2,698,094	+				-0.4
2,698,094	+				-0.6
2,698,094	+				-0.0
2,698,094	+				-0.6
2,698,094	+				-1.6
2,698,095	-				+0.2
2,698,095	-				+0.1
2,698,095	-				-1.0
2,698,095	-				-1.0
2,698,095	-				+0.6
2,698,095	-				-0.4
2,698,095	-				-0.4
2,698,095	-				-0.8
2,698,095	-				+2.0
2,698,095	-				+0.6
2,698,095	-				-1.4
2,698,095	-				-1.3
2,698,095	-				-2.2
2,698,095	-				-1.6
2,698,095	-				+2.0
2,698,095	-				-0.3
2,698,095	-				-1.0
2,698,095	-				-0.8
2,698,095	-				-2.9
2,698,111	-		LRK53_RS12115	0.10	-2.4
2,698,124	+		LRK53_RS12115	0.11	+1.0
2,698,125	-		LRK53_RS12115	0.11	-2.0
2,698,218	+		LRK53_RS12115	0.16	-0.5
2,698,465	+		LRK53_RS12115	0.29	-2.5
2,698,466	-		LRK53_RS12115	0.29	-0.6
2,698,466	-		LRK53_RS12115	0.29	+0.4
2,698,466	-		LRK53_RS12115	0.29	+0.4
2,698,466	-		LRK53_RS12115	0.29	-1.4
2,698,604	+		LRK53_RS12115	0.36	+0.4
2,698,604	+		LRK53_RS12115	0.36	+1.0
2,698,604	+		LRK53_RS12115	0.36	-1.0
2,698,605	-		LRK53_RS12115	0.36	+0.5
2,698,605	-		LRK53_RS12115	0.36	+0.7
2,698,640	+		LRK53_RS12115	0.38	-0.6
2,698,641	-		LRK53_RS12115	0.38	-1.6
2,698,641	-		LRK53_RS12115	0.38	-1.4
2,698,641	-		LRK53_RS12115	0.38	-1.0
2,698,641	-		LRK53_RS12115	0.38	+0.8
2,698,641	-		LRK53_RS12115	0.38	-0.0
2,699,061	-		LRK53_RS12115	0.60	+1.6
2,699,129	+		LRK53_RS12115	0.64	-1.6
2,699,129	+		LRK53_RS12115	0.64	-0.0
2,699,129	+		LRK53_RS12115	0.64	-1.4
2,699,130	-		LRK53_RS12115	0.64	-1.0
2,699,130	-		LRK53_RS12115	0.64	+2.0
2,699,159	+		LRK53_RS12115	0.65	+0.6
2,699,159	+		LRK53_RS12115	0.65	-0.6
2,699,159	+		LRK53_RS12115	0.65	+2.0
2,699,159	+		LRK53_RS12115	0.65	-2.6
2,699,159	+		LRK53_RS12115	0.65	+0.2
2,699,159	+		LRK53_RS12115	0.65	-0.4
2,699,159	+		LRK53_RS12115	0.65	-0.0
2,699,159	+		LRK53_RS12115	0.65	-0.4
2,699,159	+		LRK53_RS12115	0.65	-0.0
2,699,160	-		LRK53_RS12115	0.65	-0.0
2,699,160	-		LRK53_RS12115	0.65	-0.6
2,699,160	-		LRK53_RS12115	0.65	-2.7
2,699,160	-		LRK53_RS12115	0.65	-0.9
2,699,160	-		LRK53_RS12115	0.65	-0.5
2,699,160	-		LRK53_RS12115	0.65	+1.0
2,699,160	-		LRK53_RS12115	0.65	-1.0
2,699,160	-		LRK53_RS12115	0.65	-0.0
2,699,180	+		LRK53_RS12115	0.66	-0.9
2,699,180	+		LRK53_RS12115	0.66	-1.8
2,699,180	+		LRK53_RS12115	0.66	+0.4
2,699,180	+		LRK53_RS12115	0.66	-3.1
2,699,180	+		LRK53_RS12115	0.66	-0.8
2,699,181	-		LRK53_RS12115	0.66	+1.6
2,699,181	-		LRK53_RS12115	0.66	-1.0
2,699,181	-		LRK53_RS12115	0.66	-1.4
2,699,181	-		LRK53_RS12115	0.66	-0.6
2,699,181	-		LRK53_RS12115	0.66	+2.0
2,699,181	-		LRK53_RS12115	0.66	-0.0
2,699,181	-		LRK53_RS12115	0.66	-1.4
2,699,181	-		LRK53_RS12115	0.66	-1.2
2,699,181	-		LRK53_RS12115	0.66	-1.6
2,699,181	-		LRK53_RS12115	0.66	-1.4
2,699,181	-		LRK53_RS12115	0.66	+0.2
2,699,246	+		LRK53_RS12115	0.70	+0.4
2,699,246	+		LRK53_RS12115	0.70	-1.4
2,699,246	+		LRK53_RS12115	0.70	+1.0
2,699,247	-		LRK53_RS12115	0.70	+2.6
2,699,247	-		LRK53_RS12115	0.70	+1.6
2,699,393	+		LRK53_RS12115	0.78	+1.0
2,699,393	+		LRK53_RS12115	0.78	+0.4
2,699,393	+		LRK53_RS12115	0.78	+1.6
2,699,393	+		LRK53_RS12115	0.78	-2.4
2,699,393	+		LRK53_RS12115	0.78	-1.7
2,699,394	-		LRK53_RS12115	0.78	-0.5
2,699,394	-		LRK53_RS12115	0.78	+1.0
2,699,394	-		LRK53_RS12115	0.78	-0.5
2,699,394	-		LRK53_RS12115	0.78	-0.4
2,699,394	-		LRK53_RS12115	0.78	-0.1
2,699,394	-		LRK53_RS12115	0.78	-1.0
2,699,394	-		LRK53_RS12115	0.78	-1.4
2,699,418	-		LRK53_RS12115	0.79	-1.0
2,699,471	+		LRK53_RS12115	0.82	-2.0
2,699,471	+		LRK53_RS12115	0.82	-3.5
2,699,471	+		LRK53_RS12115	0.82	-1.0
2,699,471	+		LRK53_RS12115	0.82	-1.0
2,699,471	+		LRK53_RS12115	0.82	-0.5
2,699,472	-		LRK53_RS12115	0.82	+0.8
2,699,472	-		LRK53_RS12115	0.82	-1.0
2,699,472	-		LRK53_RS12115	0.82	-0.0
2,699,472	-		LRK53_RS12115	0.82	+1.0
2,699,514	+		LRK53_RS12115	0.84	-1.5
2,699,515	-		LRK53_RS12115	0.84	+1.0
2,699,723	+				+0.1
2,699,723	+				+1.2
2,699,723	+				-1.0
2,699,724	-				+1.0
2,699,724	-				-1.8
2,699,724	-				+0.3
2,699,724	-				+0.6
2,699,724	-				-0.0
2,699,724	-				-0.0
2,699,724	-				-1.6
2,699,724	-				-0.3
2,699,803	-				+0.2
2,700,137	-				-1.3
2,700,263	+		LRK53_RS12130	0.47	-0.6
2,700,264	-		LRK53_RS12130	0.47	+1.6
2,700,401	+				+0.6
2,700,525	+				-0.0
2,700,526	-				+0.1
2,700,526	-				+0.8
2,700,526	-				+0.4
2,700,526	-				+2.6
2,700,526	-				+0.8
2,700,526	-				-1.0
2,700,526	-				-0.0
2,700,526	-				-1.0
2,700,526	-				-1.0
2,700,526	-				+0.2
2,700,526	-				+0.6
2,700,526	-				-0.4
2,700,526	-				-0.6
2,700,526	-				+2.6
2,700,553	+				-0.0
2,700,553	+				-3.1
2,700,553	+				-1.0
2,700,554	-				+1.3
2,700,556	-				-3.2