Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11955

Experiment: NLDM_defined low iron; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low iron; midlog
2,664,760	+				+0.6
2,664,760	+				-0.8
2,664,760	+				-0.2
2,664,760	+				-0.1
2,664,760	+				-0.4
2,664,760	+				-0.4
2,664,760	+				-0.6
2,664,764	+				+1.0
2,664,764	+				-0.1
2,664,764	+				+0.0
2,664,764	+				+0.4
2,664,764	+				-1.0
2,664,764	+				-0.3
2,664,764	+				-1.0
2,664,764	+				-0.1
2,664,764	+				+0.2
2,664,764	+				+0.1
2,664,764	+				-0.4
2,664,764	+				+1.0
2,664,770	+				-1.5
2,664,770	+				+1.2
2,664,770	+				-0.6
2,664,771	-				+0.6
2,664,771	-				+1.0
2,664,771	-				-0.4
2,664,771	-				-0.8
2,664,771	-				+0.0
2,664,771	-				-1.4
2,664,803	+				-0.4
2,664,803	+				+0.2
2,664,803	+				+0.7
2,664,803	+				+1.1
2,664,803	+				+0.4
2,664,804	-				-0.0
2,664,804	-				+0.5
2,664,804	-				-0.6
2,664,806	+				+1.0
2,664,806	+				+0.4
2,664,806	+				-0.5
2,664,806	+				+0.5
2,664,806	+				+0.5
2,664,806	+				+1.0
2,664,806	+				+1.2
2,664,806	+				+1.6
2,664,806	+				+0.7
2,664,806	+				-0.6
2,664,806	+				-0.8
2,664,807	-				+0.0
2,664,807	-				+0.4
2,664,807	-				-0.8
2,664,905	+		LRK53_RS11950	0.22	-2.5
2,664,905	+		LRK53_RS11950	0.22	-1.4
2,664,906	-		LRK53_RS11950	0.23	+2.0
2,664,906	-		LRK53_RS11950	0.23	-0.0
2,664,906	-		LRK53_RS11950	0.23	-1.0
2,664,906	-		LRK53_RS11950	0.23	-1.6
2,664,945	+		LRK53_RS11950	0.29	-0.2
2,664,945	+		LRK53_RS11950	0.29	+0.7
2,664,945	+		LRK53_RS11950	0.29	-2.4
2,664,945	+		LRK53_RS11950	0.29	+2.0
2,664,946	-		LRK53_RS11950	0.29	-0.7
2,664,946	-		LRK53_RS11950	0.29	-1.4
2,664,946	-		LRK53_RS11950	0.29	-0.0
2,665,301	+		LRK53_RS11950	0.88	-0.6
2,665,301	+		LRK53_RS11950	0.88	-0.8
2,665,301	+		LRK53_RS11950	0.88	-0.0
2,665,301	+		LRK53_RS11950	0.88	-0.5
2,665,301	+		LRK53_RS11950	0.88	-0.1
2,665,301	+		LRK53_RS11950	0.88	+0.5
2,665,301	+		LRK53_RS11950	0.88	-0.5
2,665,301	+		LRK53_RS11950	0.88	-0.1
2,665,301	+		LRK53_RS11950	0.88	-1.0
2,665,301	+		LRK53_RS11950	0.88	-1.0
2,665,301	+		LRK53_RS11950	0.88	+0.2
2,665,301	+		LRK53_RS11950	0.88	+0.4
2,665,302	-		LRK53_RS11950	0.88	-0.0
2,665,302	-		LRK53_RS11950	0.88	+2.0
2,665,302	-		LRK53_RS11950	0.88	+0.2
2,665,302	-		LRK53_RS11950	0.88	+0.5
2,665,302	-		LRK53_RS11950	0.88	+0.6
2,665,302	-		LRK53_RS11950	0.88	+0.4
2,665,358	+				+0.5
2,665,358	+				-1.6
2,665,358	+				-1.1
2,665,359	-				-0.1
2,665,359	-				-0.9
2,665,359	-				-0.4
2,665,359	-				-1.8
2,665,387	+				+0.8
2,665,387	+				-2.2
2,665,387	+				-0.4
2,665,387	+				+0.6
2,665,387	+				+1.0
2,665,387	+				-0.6
2,665,388	-				-0.0
2,665,388	-				+1.7
2,665,388	-				-0.4
2,665,388	-				-0.8
2,665,513	+				+1.0
2,665,513	+				-0.8
2,665,514	-				+1.0
2,665,514	-				-0.8
2,665,514	-				-0.9
2,665,514	-				+0.1
2,665,548	+				-0.5
2,665,548	+				-0.4
2,665,548	+				+0.4
2,665,548	+				-1.8
2,665,548	+				+0.1
2,665,548	+				-1.7
2,665,548	+				-1.1
2,665,549	-				-0.4
2,665,549	-				+0.2
2,665,549	-				-0.5
2,665,553	+				+1.0
2,665,553	+				-0.0
2,665,553	+				-0.5
2,665,554	-				-0.9
2,665,554	-				-1.0
2,665,554	-				-0.8
2,665,554	-				+0.0
2,665,554	-				-0.8
2,665,554	-				-1.0
2,665,632	-		LRK53_RS11955	0.10	-1.8
2,665,632	-		LRK53_RS11955	0.10	-0.0
2,665,632	-		LRK53_RS11955	0.10	-0.4
2,665,632	-		LRK53_RS11955	0.10	-0.6
2,665,632	-		LRK53_RS11955	0.10	-0.5
2,665,632	-		LRK53_RS11955	0.10	-0.4
2,666,040	+		LRK53_RS11955	0.30	-0.1
2,666,040	+		LRK53_RS11955	0.30	-0.6
2,666,040	+		LRK53_RS11955	0.30	-1.3
2,666,040	+		LRK53_RS11955	0.30	-2.2
2,666,040	+		LRK53_RS11955	0.30	+0.5
2,666,040	+		LRK53_RS11955	0.30	-0.3
2,666,041	-		LRK53_RS11955	0.30	-0.0
2,666,041	-		LRK53_RS11955	0.30	-0.0
2,666,041	-		LRK53_RS11955	0.30	-1.7
2,666,041	-		LRK53_RS11955	0.30	-0.6
2,666,085	+		LRK53_RS11955	0.33	-1.4
2,666,504	+		LRK53_RS11955	0.53	-1.4
2,666,505	-		LRK53_RS11955	0.53	-0.7
2,666,513	+		LRK53_RS11955	0.54	-0.0
2,666,513	+		LRK53_RS11955	0.54	-0.8
2,666,514	-		LRK53_RS11955	0.54	-1.8
2,666,514	-		LRK53_RS11955	0.54	-1.9
2,666,514	-		LRK53_RS11955	0.54	-2.2
2,666,514	-		LRK53_RS11955	0.54	-0.0
2,666,514	-		LRK53_RS11955	0.54	-0.5
2,666,613	+		LRK53_RS11955	0.59	-4.2
2,666,705	+		LRK53_RS11955	0.63	-0.0
2,666,705	+		LRK53_RS11955	0.63	-1.0
2,666,705	+		LRK53_RS11955	0.63	+0.7
2,666,705	+		LRK53_RS11955	0.63	+0.2
2,666,705	+		LRK53_RS11955	0.63	-2.1
2,666,705	+		LRK53_RS11955	0.63	-1.7
2,666,705	+		LRK53_RS11955	0.63	-1.0
2,666,705	+		LRK53_RS11955	0.63	-1.2
2,666,705	+		LRK53_RS11955	0.63	-0.7
2,666,705	+		LRK53_RS11955	0.63	-1.2
2,666,705	+		LRK53_RS11955	0.63	-1.6
2,666,706	-		LRK53_RS11955	0.63	-0.0
2,666,706	-		LRK53_RS11955	0.63	-2.8
2,666,706	-		LRK53_RS11955	0.63	-1.0
2,666,706	-		LRK53_RS11955	0.63	-0.5
2,666,706	-		LRK53_RS11955	0.63	+0.3
2,666,706	-		LRK53_RS11955	0.63	-0.9
2,666,706	-		LRK53_RS11955	0.63	-0.9
2,667,313	+				-0.0
2,667,314	-				-1.5
2,667,314	-				-3.4
2,667,314	-				-2.2
2,667,314	-				-0.5
2,667,364	+				-0.5
2,667,364	+				-2.7
2,667,364	+				-0.9
2,667,364	+				-0.4
2,667,364	+				-1.0
2,667,365	-				-2.8
2,667,365	-				-3.2
2,667,365	-				+0.2
2,667,365	-				-2.2
2,667,365	-				-0.1
2,667,365	-				-2.4
2,667,365	-				-1.1
2,667,365	-				-0.5
2,667,481	-				-1.1
2,667,513	+				+1.8
2,667,551	+				-1.0
2,667,619	+		LRK53_RS11960	0.18	-0.6
2,667,619	+		LRK53_RS11960	0.18	+1.0
2,667,619	+		LRK53_RS11960	0.18	-0.8
2,667,619	+		LRK53_RS11960	0.18	-0.0
2,667,995	+		LRK53_RS11960	0.69	-0.8
2,668,228	+				-0.3
2,668,228	+				-0.8
2,668,228	+				+1.1
2,668,228	+				+2.0
2,668,228	+				+1.0
2,668,228	+				+0.2
2,668,228	+				-1.0
2,668,228	+				+0.4
2,668,228	+				+0.3
2,668,229	-				-1.5
2,668,229	-				+1.4
2,668,229	-				+0.5
2,668,229	-				-1.0
2,668,229	-				-0.9
2,668,229	-				-0.1
2,668,229	-				+0.4
2,668,229	-				-1.0
2,668,229	-				+0.2
2,668,229	-				-2.0
2,668,236	+				-1.5
2,668,305	+				-0.1
2,668,305	+				+2.6