Experiment: NLDM_defined low iron; midlog
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS11825 and LRK53_RS11830 are separated by 67 nucleotides LRK53_RS11830 and LRK53_RS11835 are separated by 13 nucleotides
LRK53_RS11825: LRK53_RS11825 - exodeoxyribonuclease VII large subunit, at 2,633,174 to 2,634,523
_RS11825
LRK53_RS11830: LRK53_RS11830 - acetolactate synthase large subunit, at 2,634,591 to 2,636,234
_RS11830
LRK53_RS11835: LRK53_RS11835 - aldehyde dehydrogenase family protein, at 2,636,248 to 2,637,678
_RS11835
Position (kb)
2634
2635
2636
2637 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2633.597 kb on + strand, within LRK53_RS11825 at 2633.598 kb on - strand, within LRK53_RS11825 at 2633.598 kb on - strand, within LRK53_RS11825 at 2633.598 kb on - strand, within LRK53_RS11825 at 2633.598 kb on - strand, within LRK53_RS11825 at 2634.463 kb on + strand at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.840 kb on + strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.841 kb on - strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.960 kb on + strand, within LRK53_RS11830 at 2634.961 kb on - strand, within LRK53_RS11830 at 2634.961 kb on - strand, within LRK53_RS11830 at 2634.961 kb on - strand, within LRK53_RS11830 at 2634.961 kb on - strand, within LRK53_RS11830 at 2634.961 kb on - strand, within LRK53_RS11830 at 2635.116 kb on + strand, within LRK53_RS11830 at 2635.116 kb on + strand, within LRK53_RS11830 at 2635.497 kb on + strand, within LRK53_RS11830 at 2635.497 kb on + strand, within LRK53_RS11830 at 2635.497 kb on + strand, within LRK53_RS11830 at 2635.498 kb on - strand, within LRK53_RS11830 at 2635.498 kb on - strand, within LRK53_RS11830 at 2635.535 kb on + strand, within LRK53_RS11830 at 2635.535 kb on + strand, within LRK53_RS11830 at 2635.536 kb on - strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.737 kb on + strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.738 kb on - strand, within LRK53_RS11830 at 2635.749 kb on + strand, within LRK53_RS11830 at 2635.749 kb on + strand, within LRK53_RS11830 at 2635.749 kb on + strand, within LRK53_RS11830 at 2635.750 kb on - strand, within LRK53_RS11830 at 2635.750 kb on - strand, within LRK53_RS11830 at 2635.750 kb on - strand, within LRK53_RS11830 at 2635.750 kb on - strand, within LRK53_RS11830 at 2635.750 kb on - strand, within LRK53_RS11830 at 2635.758 kb on + strand, within LRK53_RS11830 at 2635.758 kb on + strand, within LRK53_RS11830 at 2635.759 kb on - strand, within LRK53_RS11830 at 2635.761 kb on + strand, within LRK53_RS11830 at 2635.761 kb on + strand, within LRK53_RS11830 at 2635.762 kb on - strand, within LRK53_RS11830 at 2635.762 kb on - strand, within LRK53_RS11830 at 2635.762 kb on - strand, within LRK53_RS11830 at 2636.013 kb on + strand, within LRK53_RS11830 at 2636.013 kb on + strand, within LRK53_RS11830 at 2636.013 kb on + strand, within LRK53_RS11830 at 2636.014 kb on - strand, within LRK53_RS11830 at 2636.014 kb on - strand, within LRK53_RS11830 at 2636.023 kb on - strand, within LRK53_RS11830 at 2636.133 kb on + strand at 2636.133 kb on + strand at 2636.133 kb on + strand at 2636.134 kb on - strand at 2636.134 kb on - strand at 2636.175 kb on + strand at 2636.175 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.263 kb on + strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.264 kb on - strand at 2636.269 kb on + strand at 2636.269 kb on + strand at 2636.269 kb on + strand at 2636.269 kb on + strand at 2636.270 kb on - strand at 2636.270 kb on - strand at 2636.270 kb on - strand at 2636.270 kb on - strand at 2636.272 kb on + strand at 2636.272 kb on + strand at 2636.272 kb on + strand at 2636.272 kb on + strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.273 kb on - strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.326 kb on + strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.327 kb on - strand at 2636.651 kb on - strand, within LRK53_RS11835 at 2636.659 kb on + strand, within LRK53_RS11835 at 2636.659 kb on + strand, within LRK53_RS11835 at 2636.659 kb on + strand, within LRK53_RS11835 at 2636.659 kb on + strand, within LRK53_RS11835 at 2637.079 kb on + strand, within LRK53_RS11835 at 2637.079 kb on + strand, within LRK53_RS11835 at 2637.080 kb on - strand, within LRK53_RS11835 at 2637.080 kb on - strand, within LRK53_RS11835 at 2637.080 kb on - strand, within LRK53_RS11835 at 2637.080 kb on - strand, within LRK53_RS11835 at 2637.118 kb on + strand, within LRK53_RS11835 at 2637.118 kb on + strand, within LRK53_RS11835 at 2637.118 kb on + strand, within LRK53_RS11835 at 2637.118 kb on + strand, within LRK53_RS11835 at 2637.118 kb on + strand, within LRK53_RS11835 at 2637.119 kb on - strand, within LRK53_RS11835 at 2637.119 kb on - strand, within LRK53_RS11835 at 2637.119 kb on - strand, within LRK53_RS11835 at 2637.119 kb on - strand, within LRK53_RS11835 at 2637.119 kb on - strand, within LRK53_RS11835 at 2637.136 kb on + strand, within LRK53_RS11835 at 2637.136 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.209 kb on + strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835 at 2637.210 kb on - strand, within LRK53_RS11835
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined low iron; midlog remove 2,633,597 + LRK53_RS11825 0.31 -0.6 2,633,598 - LRK53_RS11825 0.31 -0.0 2,633,598 - LRK53_RS11825 0.31 +1.0 2,633,598 - LRK53_RS11825 0.31 -1.6 2,633,598 - LRK53_RS11825 0.31 +0.4 2,634,463 + +0.8 2,634,840 + LRK53_RS11830 0.15 -1.3 2,634,840 + LRK53_RS11830 0.15 -1.0 2,634,840 + LRK53_RS11830 0.15 -0.6 2,634,840 + LRK53_RS11830 0.15 -1.1 2,634,840 + LRK53_RS11830 0.15 -0.9 2,634,840 + LRK53_RS11830 0.15 -0.6 2,634,840 + LRK53_RS11830 0.15 +0.3 2,634,840 + LRK53_RS11830 0.15 +0.8 2,634,841 - LRK53_RS11830 0.15 +0.3 2,634,841 - LRK53_RS11830 0.15 -0.1 2,634,841 - LRK53_RS11830 0.15 +2.3 2,634,841 - LRK53_RS11830 0.15 +1.0 2,634,841 - LRK53_RS11830 0.15 -1.1 2,634,841 - LRK53_RS11830 0.15 -0.3 2,634,841 - LRK53_RS11830 0.15 -0.0 2,634,841 - LRK53_RS11830 0.15 +1.0 2,634,960 + LRK53_RS11830 0.22 -0.2 2,634,960 + LRK53_RS11830 0.22 -0.3 2,634,960 + LRK53_RS11830 0.22 -1.3 2,634,960 + LRK53_RS11830 0.22 -0.0 2,634,960 + LRK53_RS11830 0.22 -0.1 2,634,960 + LRK53_RS11830 0.22 -0.6 2,634,961 - LRK53_RS11830 0.23 -1.9 2,634,961 - LRK53_RS11830 0.23 -0.0 2,634,961 - LRK53_RS11830 0.23 -1.6 2,634,961 - LRK53_RS11830 0.23 -1.3 2,634,961 - LRK53_RS11830 0.23 -0.3 2,635,116 + LRK53_RS11830 0.32 -0.3 2,635,116 + LRK53_RS11830 0.32 +1.5 2,635,497 + LRK53_RS11830 0.55 -1.1 2,635,497 + LRK53_RS11830 0.55 -0.4 2,635,497 + LRK53_RS11830 0.55 -0.3 2,635,498 - LRK53_RS11830 0.55 -0.6 2,635,498 - LRK53_RS11830 0.55 -1.0 2,635,535 + LRK53_RS11830 0.57 -0.6 2,635,535 + LRK53_RS11830 0.57 -0.5 2,635,536 - LRK53_RS11830 0.57 -1.0 2,635,737 + LRK53_RS11830 0.70 -1.6 2,635,737 + LRK53_RS11830 0.70 +0.3 2,635,737 + LRK53_RS11830 0.70 +0.3 2,635,737 + LRK53_RS11830 0.70 -0.2 2,635,737 + LRK53_RS11830 0.70 -0.7 2,635,737 + LRK53_RS11830 0.70 +1.4 2,635,737 + LRK53_RS11830 0.70 -0.6 2,635,737 + LRK53_RS11830 0.70 -0.3 2,635,737 + LRK53_RS11830 0.70 -0.6 2,635,737 + LRK53_RS11830 0.70 +0.8 2,635,737 + LRK53_RS11830 0.70 -0.6 2,635,737 + LRK53_RS11830 0.70 +0.3 2,635,737 + LRK53_RS11830 0.70 -0.6 2,635,737 + LRK53_RS11830 0.70 -0.6 2,635,737 + LRK53_RS11830 0.70 -0.3 2,635,738 - LRK53_RS11830 0.70 +1.0 2,635,738 - LRK53_RS11830 0.70 -0.7 2,635,738 - LRK53_RS11830 0.70 -1.2 2,635,738 - LRK53_RS11830 0.70 -0.6 2,635,738 - LRK53_RS11830 0.70 +1.0 2,635,738 - LRK53_RS11830 0.70 -1.9 2,635,738 - LRK53_RS11830 0.70 -0.4 2,635,738 - LRK53_RS11830 0.70 +0.4 2,635,738 - LRK53_RS11830 0.70 -2.8 2,635,738 - LRK53_RS11830 0.70 +0.6 2,635,738 - LRK53_RS11830 0.70 +1.0 2,635,738 - LRK53_RS11830 0.70 -1.6 2,635,738 - LRK53_RS11830 0.70 -1.8 2,635,738 - LRK53_RS11830 0.70 +1.0 2,635,738 - LRK53_RS11830 0.70 -1.2 2,635,738 - LRK53_RS11830 0.70 +0.7 2,635,738 - LRK53_RS11830 0.70 +1.4 2,635,738 - LRK53_RS11830 0.70 +0.1 2,635,738 - LRK53_RS11830 0.70 -0.0 2,635,749 + LRK53_RS11830 0.70 -0.4 2,635,749 + LRK53_RS11830 0.70 -0.5 2,635,749 + LRK53_RS11830 0.70 -1.8 2,635,750 - LRK53_RS11830 0.70 +0.1 2,635,750 - LRK53_RS11830 0.70 -0.3 2,635,750 - LRK53_RS11830 0.70 +0.6 2,635,750 - LRK53_RS11830 0.70 +0.2 2,635,750 - LRK53_RS11830 0.70 -0.6 2,635,758 + LRK53_RS11830 0.71 +0.5 2,635,758 + LRK53_RS11830 0.71 -0.6 2,635,759 - LRK53_RS11830 0.71 -1.3 2,635,761 + LRK53_RS11830 0.71 -0.0 2,635,761 + LRK53_RS11830 0.71 -1.8 2,635,762 - LRK53_RS11830 0.71 +1.6 2,635,762 - LRK53_RS11830 0.71 -1.8 2,635,762 - LRK53_RS11830 0.71 -1.3 2,636,013 + LRK53_RS11830 0.86 -0.8 2,636,013 + LRK53_RS11830 0.86 -1.0 2,636,013 + LRK53_RS11830 0.86 -1.3 2,636,014 - LRK53_RS11830 0.87 -1.5 2,636,014 - LRK53_RS11830 0.87 -0.1 2,636,023 - LRK53_RS11830 0.87 -2.3 2,636,133 + -1.0 2,636,133 + +1.2 2,636,133 + -2.6 2,636,134 - -0.4 2,636,134 - -1.1 2,636,175 + -0.3 2,636,175 + -0.9 2,636,263 + -0.0 2,636,263 + -0.1 2,636,263 + +1.6 2,636,263 + -0.9 2,636,263 + +0.5 2,636,263 + -0.7 2,636,263 + +2.4 2,636,263 + -0.7 2,636,263 + +0.6 2,636,263 + -0.5 2,636,263 + -0.9 2,636,264 - -0.4 2,636,264 - -0.5 2,636,264 - +0.6 2,636,264 - -0.2 2,636,264 - +0.8 2,636,264 - -0.3 2,636,264 - +1.5 2,636,264 - -1.2 2,636,264 - -0.6 2,636,264 - -0.7 2,636,264 - -0.6 2,636,269 + -0.2 2,636,269 + +3.6 2,636,269 + -1.0 2,636,269 + -0.8 2,636,270 - -1.0 2,636,270 - +0.3 2,636,270 - +1.6 2,636,270 - -0.3 2,636,272 + +0.7 2,636,272 + -0.3 2,636,272 + -1.0 2,636,272 + -0.8 2,636,273 - -1.0 2,636,273 - +1.0 2,636,273 - -0.4 2,636,273 - +1.6 2,636,273 - -2.3 2,636,273 - +1.5 2,636,273 - -2.6 2,636,273 - -0.9 2,636,273 - +0.2 2,636,326 + -0.3 2,636,326 + -0.8 2,636,326 + -0.4 2,636,326 + -0.3 2,636,326 + -0.7 2,636,326 + +0.2 2,636,326 + -0.8 2,636,327 - -0.9 2,636,327 - +1.0 2,636,327 - +0.4 2,636,327 - +1.0 2,636,327 - +1.3 2,636,327 - -0.6 2,636,327 - -1.3 2,636,651 - LRK53_RS11835 0.28 -0.7 2,636,659 + LRK53_RS11835 0.29 +1.0 2,636,659 + LRK53_RS11835 0.29 +0.3 2,636,659 + LRK53_RS11835 0.29 +1.0 2,636,659 + LRK53_RS11835 0.29 -0.3 2,637,079 + LRK53_RS11835 0.58 -2.0 2,637,079 + LRK53_RS11835 0.58 -0.3 2,637,080 - LRK53_RS11835 0.58 +1.0 2,637,080 - LRK53_RS11835 0.58 -0.0 2,637,080 - LRK53_RS11835 0.58 +0.3 2,637,080 - LRK53_RS11835 0.58 -0.9 2,637,118 + LRK53_RS11835 0.61 +1.4 2,637,118 + LRK53_RS11835 0.61 -0.8 2,637,118 + LRK53_RS11835 0.61 -0.5 2,637,118 + LRK53_RS11835 0.61 -0.8 2,637,118 + LRK53_RS11835 0.61 +0.4 2,637,119 - LRK53_RS11835 0.61 -0.0 2,637,119 - LRK53_RS11835 0.61 -0.0 2,637,119 - LRK53_RS11835 0.61 -2.2 2,637,119 - LRK53_RS11835 0.61 -0.2 2,637,119 - LRK53_RS11835 0.61 +3.0 2,637,136 + LRK53_RS11835 0.62 -0.3 2,637,136 + LRK53_RS11835 0.62 -1.6 2,637,209 + LRK53_RS11835 0.67 -1.0 2,637,209 + LRK53_RS11835 0.67 -0.6 2,637,209 + LRK53_RS11835 0.67 -0.0 2,637,209 + LRK53_RS11835 0.67 -1.6 2,637,209 + LRK53_RS11835 0.67 +1.0 2,637,209 + LRK53_RS11835 0.67 +0.7 2,637,209 + LRK53_RS11835 0.67 -1.0 2,637,209 + LRK53_RS11835 0.67 +0.7 2,637,209 + LRK53_RS11835 0.67 -0.3 2,637,209 + LRK53_RS11835 0.67 -0.5 2,637,209 + LRK53_RS11835 0.67 -2.0 2,637,210 - LRK53_RS11835 0.67 -0.3 2,637,210 - LRK53_RS11835 0.67 +1.0 2,637,210 - LRK53_RS11835 0.67 +1.0 2,637,210 - LRK53_RS11835 0.67 -1.0 2,637,210 - LRK53_RS11835 0.67 -0.5 2,637,210 - LRK53_RS11835 0.67 +0.1 2,637,210 - LRK53_RS11835 0.67 -0.2 2,637,210 - LRK53_RS11835 0.67 +0.4
Or see this region's nucleotide sequence