Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10450

Experiment: NLDM_defined low iron; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low iron; midlog
2,334,866	+		LRK53_RS10440	0.30	+0.1
2,334,866	+		LRK53_RS10440	0.30	+0.1
2,334,866	+		LRK53_RS10440	0.30	+0.4
2,334,866	+		LRK53_RS10440	0.30	+2.3
2,334,867	-		LRK53_RS10440	0.30	-2.8
2,334,867	-		LRK53_RS10440	0.30	+0.1
2,334,867	-		LRK53_RS10440	0.30	+0.2
2,334,867	-		LRK53_RS10440	0.30	+1.0
2,334,867	-		LRK53_RS10440	0.30	+1.0
2,334,867	-		LRK53_RS10440	0.30	-0.0
2,334,867	-		LRK53_RS10440	0.30	-0.6
2,334,867	-		LRK53_RS10440	0.30	+0.6
2,334,957	+		LRK53_RS10440	0.39	-0.6
2,334,957	+		LRK53_RS10440	0.39	-0.0
2,334,958	-		LRK53_RS10440	0.39	-1.7
2,334,958	-		LRK53_RS10440	0.39	-0.0
2,335,013	-		LRK53_RS10440	0.45	+1.0
2,335,020	+		LRK53_RS10440	0.46	-0.4
2,335,021	-		LRK53_RS10440	0.46	-0.4
2,335,021	-		LRK53_RS10440	0.46	-0.5
2,335,021	-		LRK53_RS10440	0.46	-1.0
2,335,071	+		LRK53_RS10440	0.51	+0.7
2,335,071	+		LRK53_RS10440	0.51	-0.3
2,335,071	+		LRK53_RS10440	0.51	+0.7
2,335,072	-		LRK53_RS10440	0.51	+2.0
2,335,293	+		LRK53_RS10440	0.74	+0.2
2,335,446	+				-2.0
2,335,446	+				+1.0
2,335,446	+				-1.3
2,335,446	+				-0.7
2,335,446	+				+3.1
2,335,447	-				-0.3
2,335,447	-				-0.8
2,335,447	-				+0.1
2,335,447	-				+0.7
2,335,447	-				-0.4
2,335,447	-				+1.4
2,335,449	+				-0.9
2,335,449	+				+1.0
2,335,449	+				-0.0
2,335,449	+				-0.3
2,335,487	+				+0.7
2,335,488	-				+0.1
2,335,529	+				-1.0
2,335,546	+				+1.0
2,335,546	+				-0.2
2,335,547	-				+1.2
2,335,589	+		LRK53_RS10445	0.25	-1.9
2,335,589	+		LRK53_RS10445	0.25	-1.5
2,335,590	-		LRK53_RS10445	0.25	-2.6
2,335,590	-		LRK53_RS10445	0.25	-1.5
2,335,631	+		LRK53_RS10445	0.45	-1.3
2,335,632	-		LRK53_RS10445	0.45	+0.5
2,335,679	+		LRK53_RS10445	0.68	-0.3
2,335,679	+		LRK53_RS10445	0.68	-3.1
2,335,679	+		LRK53_RS10445	0.68	-0.3
2,335,679	+		LRK53_RS10445	0.68	-0.4
2,335,679	+		LRK53_RS10445	0.68	+0.7
2,335,679	+		LRK53_RS10445	0.68	-1.6
2,335,679	+		LRK53_RS10445	0.68	+0.5
2,335,679	+		LRK53_RS10445	0.68	-0.5
2,335,679	+		LRK53_RS10445	0.68	-2.3
2,335,679	+		LRK53_RS10445	0.68	-0.6
2,335,679	+		LRK53_RS10445	0.68	-0.8
2,335,679	+		LRK53_RS10445	0.68	+0.6
2,335,679	+		LRK53_RS10445	0.68	+0.3
2,335,679	+		LRK53_RS10445	0.68	-0.6
2,335,679	+		LRK53_RS10445	0.68	+2.0
2,335,679	+		LRK53_RS10445	0.68	+1.2
2,335,679	+		LRK53_RS10445	0.68	-2.2
2,335,680	-		LRK53_RS10445	0.68	-0.0
2,335,680	-		LRK53_RS10445	0.68	+0.1
2,335,680	-		LRK53_RS10445	0.68	-0.2
2,335,680	-		LRK53_RS10445	0.68	+1.0
2,335,680	-		LRK53_RS10445	0.68	-1.3
2,335,680	-		LRK53_RS10445	0.68	+0.8
2,335,680	-		LRK53_RS10445	0.68	+0.1
2,335,680	-		LRK53_RS10445	0.68	+1.0
2,335,680	-		LRK53_RS10445	0.68	+0.2
2,335,680	-		LRK53_RS10445	0.68	-1.1
2,335,680	-		LRK53_RS10445	0.68	-0.6
2,335,680	-		LRK53_RS10445	0.68	-0.6
2,335,680	-		LRK53_RS10445	0.68	+0.1
2,335,680	-		LRK53_RS10445	0.68	-1.1
2,335,680	-		LRK53_RS10445	0.68	+1.4
2,335,680	-		LRK53_RS10445	0.68	-0.1
2,335,680	-		LRK53_RS10445	0.68	-1.0
2,335,680	-		LRK53_RS10445	0.68	+1.3
2,336,368	+		LRK53_RS10450	0.58	-1.6
2,336,368	+		LRK53_RS10450	0.58	-1.0
2,336,369	-		LRK53_RS10450	0.58	-1.0
2,336,533	+		LRK53_RS10450	0.74	+1.4
2,336,533	+		LRK53_RS10450	0.74	-0.8
2,336,533	+		LRK53_RS10450	0.74	+0.1
2,336,533	+		LRK53_RS10450	0.74	+1.0
2,336,533	+		LRK53_RS10450	0.74	-2.4
2,336,533	+		LRK53_RS10450	0.74	-1.2
2,336,534	-		LRK53_RS10450	0.74	+1.0
2,336,534	-		LRK53_RS10450	0.74	-0.6
2,336,534	-		LRK53_RS10450	0.74	-0.6
2,336,534	-		LRK53_RS10450	0.74	-0.3
2,336,534	-		LRK53_RS10450	0.74	-0.0
2,336,793	+				-0.2
2,336,793	+				-1.8
2,336,793	+				+0.2
2,336,793	+				+0.2
2,336,793	+				-1.2
2,336,793	+				-0.1
2,336,793	+				+0.6
2,336,793	+				-2.5
2,336,793	+				+1.0
2,336,793	+				-0.7
2,336,793	+				-0.5
2,336,793	+				-1.0
2,336,793	+				+0.2
2,336,794	-				+0.1
2,336,794	-				+0.7
2,336,794	-				-1.5
2,336,794	-				+0.8
2,336,794	-				-0.4
2,337,282	+		LRK53_RS10455	0.58	-0.6
2,337,311	+		LRK53_RS10455	0.61	+0.3
2,337,311	+		LRK53_RS10455	0.61	+0.4
2,337,311	+		LRK53_RS10455	0.61	-1.3
2,337,311	+		LRK53_RS10455	0.61	-0.0
2,337,311	+		LRK53_RS10455	0.61	+0.1
2,337,311	+		LRK53_RS10455	0.61	+1.5
2,337,311	+		LRK53_RS10455	0.61	-0.0
2,337,311	+		LRK53_RS10455	0.61	-0.8
2,337,311	+		LRK53_RS10455	0.61	-1.0
2,337,311	+		LRK53_RS10455	0.61	-0.3
2,337,311	+		LRK53_RS10455	0.61	+0.2
2,337,311	+		LRK53_RS10455	0.61	-0.0
2,337,311	+		LRK53_RS10455	0.61	-1.8
2,337,311	+		LRK53_RS10455	0.61	-1.2
2,337,312	-		LRK53_RS10455	0.61	+0.7
2,337,312	-		LRK53_RS10455	0.61	+0.4
2,337,312	-		LRK53_RS10455	0.61	+0.4
2,337,312	-		LRK53_RS10455	0.61	+2.8
2,337,312	-		LRK53_RS10455	0.61	+0.3
2,337,312	-		LRK53_RS10455	0.61	-1.3
2,337,312	-		LRK53_RS10455	0.61	-0.7
2,337,312	-		LRK53_RS10455	0.61	+0.6
2,337,398	+		LRK53_RS10455	0.72	-0.7
2,337,398	+		LRK53_RS10455	0.72	-0.4
2,337,398	+		LRK53_RS10455	0.72	-0.7
2,337,398	+		LRK53_RS10455	0.72	-0.1
2,337,398	+		LRK53_RS10455	0.72	+0.2
2,337,399	-		LRK53_RS10455	0.72	-0.6
2,337,399	-		LRK53_RS10455	0.72	+0.4
2,337,399	-		LRK53_RS10455	0.72	+1.0
2,337,399	-		LRK53_RS10455	0.72	-0.4
2,337,572	+				-0.4
2,337,572	+				-0.0
2,337,572	+				+0.2
2,337,572	+				-0.5
2,337,572	+				-1.3
2,337,572	+				+0.2
2,337,572	+				+0.8
2,337,572	+				+0.1
2,337,572	+				-0.2
2,337,572	+				-1.3
2,337,572	+				+0.4
2,337,572	+				-0.0
2,337,573	-				-0.0
2,337,573	-				-3.5
2,337,573	-				-2.0
2,337,573	-				-0.3
2,337,573	-				+0.2
2,337,573	-				-0.7
2,337,573	-				-0.0
2,337,573	-				-2.2
2,337,573	-				-0.0
2,337,573	-				-0.4
2,337,573	-				-1.2
2,337,573	-				+0.2
2,337,573	-				-1.7
2,337,573	-				+0.2