Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04810

Experiment: NLDM_defined low iron; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low iron; midlog
1,120,723	-		LRK53_RS04805	0.29	+0.2
1,120,772	-		LRK53_RS04805	0.34	+0.4
1,120,807	-		LRK53_RS04805	0.37	-1.4
1,120,807	-		LRK53_RS04805	0.37	-1.6
1,120,845	-		LRK53_RS04805	0.41	+1.9
1,120,846	+		LRK53_RS04805	0.41	-0.6
1,120,846	+		LRK53_RS04805	0.41	-1.3
1,120,846	+		LRK53_RS04805	0.41	-1.4
1,120,846	+		LRK53_RS04805	0.41	+0.9
1,120,847	-		LRK53_RS04805	0.41	-0.6
1,120,847	-		LRK53_RS04805	0.41	-0.4
1,120,849	+		LRK53_RS04805	0.41	+1.3
1,120,850	-		LRK53_RS04805	0.41	-0.5
1,120,850	-		LRK53_RS04805	0.41	-1.9
1,120,850	-		LRK53_RS04805	0.41	-0.6
1,120,850	-		LRK53_RS04805	0.41	+1.2
1,120,850	-		LRK53_RS04805	0.41	+1.4
1,120,850	-		LRK53_RS04805	0.41	-1.0
1,120,868	+		LRK53_RS04805	0.43	+0.0
1,120,868	+		LRK53_RS04805	0.43	+1.1
1,120,868	+		LRK53_RS04805	0.43	-1.9
1,120,868	+		LRK53_RS04805	0.43	-0.4
1,120,868	+		LRK53_RS04805	0.43	-1.0
1,120,868	+		LRK53_RS04805	0.43	+0.2
1,120,868	+		LRK53_RS04805	0.43	+1.3
1,120,868	+		LRK53_RS04805	0.43	-0.2
1,120,868	+		LRK53_RS04805	0.43	-0.6
1,120,869	-		LRK53_RS04805	0.43	-0.1
1,120,869	-		LRK53_RS04805	0.43	-0.2
1,120,869	-		LRK53_RS04805	0.43	-0.5
1,120,869	-		LRK53_RS04805	0.43	-0.2
1,120,869	-		LRK53_RS04805	0.43	+0.6
1,120,869	-		LRK53_RS04805	0.43	-0.1
1,120,869	-		LRK53_RS04805	0.43	+1.2
1,120,888	-		LRK53_RS04805	0.45	-1.1
1,120,888	-		LRK53_RS04805	0.45	-0.6
1,120,911	+		LRK53_RS04805	0.47	-0.2
1,120,911	+		LRK53_RS04805	0.47	+0.9
1,120,911	+		LRK53_RS04805	0.47	-1.6
1,120,912	-		LRK53_RS04805	0.47	-2.6
1,120,912	-		LRK53_RS04805	0.47	+0.0
1,120,927	+		LRK53_RS04805	0.48	-0.2
1,120,931	+		LRK53_RS04805	0.48	-1.9
1,120,931	+		LRK53_RS04805	0.48	-0.1
1,120,932	-		LRK53_RS04805	0.49	-0.2
1,120,932	-		LRK53_RS04805	0.49	+0.9
1,120,932	-		LRK53_RS04805	0.49	-0.5
1,120,932	-		LRK53_RS04805	0.49	-0.9
1,120,935	-		LRK53_RS04805	0.49	+1.4
1,120,959	+		LRK53_RS04805	0.51	-1.3
1,120,959	+		LRK53_RS04805	0.51	-0.8
1,120,981	+		LRK53_RS04805	0.53	-1.3
1,120,981	+		LRK53_RS04805	0.53	-4.2
1,120,981	+		LRK53_RS04805	0.53	-0.4
1,120,981	+		LRK53_RS04805	0.53	-0.4
1,120,981	+		LRK53_RS04805	0.53	+0.2
1,120,981	+		LRK53_RS04805	0.53	+0.4
1,120,981	+		LRK53_RS04805	0.53	-0.5
1,120,981	+		LRK53_RS04805	0.53	-0.9
1,120,981	+		LRK53_RS04805	0.53	-1.2
1,120,981	+		LRK53_RS04805	0.53	-1.6
1,120,982	-		LRK53_RS04805	0.53	-0.9
1,120,982	-		LRK53_RS04805	0.53	+0.7
1,120,982	-		LRK53_RS04805	0.53	+0.1
1,120,982	-		LRK53_RS04805	0.53	-1.2
1,120,982	-		LRK53_RS04805	0.53	-0.5
1,120,982	-		LRK53_RS04805	0.53	-1.1
1,120,990	+		LRK53_RS04805	0.54	-1.0
1,121,012	-		LRK53_RS04805	0.56	-0.4
1,121,020	+		LRK53_RS04805	0.57	+0.6
1,121,020	+		LRK53_RS04805	0.57	-0.6
1,121,021	-		LRK53_RS04805	0.57	-0.6
1,121,057	+		LRK53_RS04805	0.60	-0.6
1,121,140	+		LRK53_RS04805	0.68	-0.1
1,121,140	+		LRK53_RS04805	0.68	-1.1
1,121,141	-		LRK53_RS04805	0.68	-1.8
1,121,148	-		LRK53_RS04805	0.68	+0.7
1,121,158	+		LRK53_RS04805	0.69	-1.3
1,121,159	-		LRK53_RS04805	0.69	-0.1
1,121,166	+		LRK53_RS04805	0.70	+0.5
1,121,167	-		LRK53_RS04805	0.70	-0.1
1,121,179	+		LRK53_RS04805	0.71	-0.6
1,121,219	-		LRK53_RS04805	0.75	-1.1
1,121,270	-		LRK53_RS04805	0.79	+0.1
1,121,385	-				+0.1
1,121,411	-				+0.1
1,121,411	-				-0.6
1,121,479	+				-0.4
1,121,509	+				-1.2
1,121,509	+				-0.1
1,121,510	-				-0.6
1,121,510	-				-0.4
1,121,510	-				+0.7
1,121,511	+				+0.4
1,121,555	-				-0.1
1,121,555	-				-0.7
1,121,578	+				+0.4
1,121,583	-				-0.6
1,121,617	+				-1.3
1,121,665	+				-0.8
1,121,678	+				-1.0
1,121,679	-				-0.3
1,121,679	-				+1.9
1,121,679	-				-0.9
1,121,680	+				-0.6
1,121,680	+				+0.7
1,121,680	+				+0.1
1,121,681	-				-0.8
1,121,694	+				-0.3
1,121,737	-				+0.7
1,121,737	-				-0.7
1,121,737	-				+0.3
1,121,760	+		LRK53_RS04810	0.15	-0.5
1,121,761	-		LRK53_RS04810	0.16	-0.7
1,121,761	-		LRK53_RS04810	0.16	-2.4
1,121,763	+		LRK53_RS04810	0.16	-0.6
1,121,764	-		LRK53_RS04810	0.16	-0.6
1,121,784	+		LRK53_RS04810	0.21	-1.6
1,121,786	+		LRK53_RS04810	0.22	+0.0
1,121,786	-		LRK53_RS04810	0.22	-0.3
1,121,868	+		LRK53_RS04810	0.41	+0.5
1,121,868	+		LRK53_RS04810	0.41	-0.9
1,121,872	+		LRK53_RS04810	0.42	-1.9
1,121,872	+		LRK53_RS04810	0.42	-0.1
1,121,872	+		LRK53_RS04810	0.42	-0.6
1,121,899	+		LRK53_RS04810	0.48	-0.5
1,121,899	+		LRK53_RS04810	0.48	-1.6
1,121,899	+		LRK53_RS04810	0.48	+1.5
1,121,900	-		LRK53_RS04810	0.48	-2.1
1,121,900	-		LRK53_RS04810	0.48	-0.6
1,121,900	-		LRK53_RS04810	0.48	-0.7
1,121,925	+		LRK53_RS04810	0.54	-2.6
1,121,926	-		LRK53_RS04810	0.55	-1.6
1,121,955	+		LRK53_RS04810	0.61	-0.3
1,121,978	+		LRK53_RS04810	0.67	+0.4
1,121,978	+		LRK53_RS04810	0.67	-0.7
1,122,018	+		LRK53_RS04810	0.76	+0.3
1,122,019	-		LRK53_RS04810	0.77	-0.1
1,122,021	+		LRK53_RS04810	0.77	-0.1
1,122,022	-		LRK53_RS04810	0.77	+1.9
1,122,022	-		LRK53_RS04810	0.77	-0.6
1,122,084	+				-1.6
1,122,084	+				-1.5
1,122,085	-				-0.4
1,122,116	-				-0.5
1,122,116	-				-1.1
1,122,116	-				+0.9
1,122,116	-				+1.5
1,122,116	-				-0.2
1,122,116	-				+1.4
1,122,116	-				-0.6
1,122,116	-				-1.1
1,122,116	-				-2.5
1,122,116	-				-0.6
1,122,168	+				-2.5
1,122,168	+				+0.1
1,122,433	-		LRK53_RS04815	0.23	-1.1
1,122,433	-		LRK53_RS04815	0.23	+2.3
1,122,433	-		LRK53_RS04815	0.23	-1.2
1,122,433	-		LRK53_RS04815	0.23	-0.9
1,122,433	-		LRK53_RS04815	0.23	+1.1
1,122,433	-		LRK53_RS04815	0.23	-0.1
1,122,433	-		LRK53_RS04815	0.23	-0.3
1,122,433	-		LRK53_RS04815	0.23	+0.1