Experiment: Pullulan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS13600 and ABZR88_RS13605 are separated by 322 nucleotides ABZR88_RS13605 and ABZR88_RS13610 are separated by 70 nucleotides
ABZR88_RS13600: ABZR88_RS13600 - FAD:protein FMN transferase, at 3,399,630 to 3,400,562
_RS13600
ABZR88_RS13605: ABZR88_RS13605 - alpha-L-fucosidase, at 3,400,885 to 3,402,672
_RS13605
ABZR88_RS13610: ABZR88_RS13610 - sugar-binding domain-containing protein, at 3,402,743 to 3,405,712
_RS13610
Position (kb)
3400
3401
3402
3403 Strain fitness (log2 ratio)
-1
0
1 at 3399.886 kb on + strand, within ABZR88_RS13600 at 3399.984 kb on - strand, within ABZR88_RS13600 at 3400.044 kb on + strand, within ABZR88_RS13600 at 3400.066 kb on - strand, within ABZR88_RS13600 at 3400.277 kb on + strand, within ABZR88_RS13600 at 3400.298 kb on + strand, within ABZR88_RS13600 at 3400.299 kb on - strand, within ABZR88_RS13600 at 3400.587 kb on + strand at 3400.629 kb on + strand at 3400.640 kb on - strand at 3400.782 kb on + strand at 3400.817 kb on - strand at 3400.948 kb on + strand at 3400.948 kb on + strand at 3400.949 kb on - strand at 3401.109 kb on - strand, within ABZR88_RS13605 at 3401.173 kb on + strand, within ABZR88_RS13605 at 3401.286 kb on + strand, within ABZR88_RS13605 at 3401.376 kb on + strand, within ABZR88_RS13605 at 3401.597 kb on - strand, within ABZR88_RS13605 at 3401.598 kb on + strand, within ABZR88_RS13605 at 3401.598 kb on + strand, within ABZR88_RS13605 at 3401.701 kb on + strand, within ABZR88_RS13605 at 3401.740 kb on + strand, within ABZR88_RS13605 at 3401.814 kb on + strand, within ABZR88_RS13605 at 3402.172 kb on - strand, within ABZR88_RS13605 at 3402.173 kb on + strand, within ABZR88_RS13605 at 3402.412 kb on - strand, within ABZR88_RS13605 at 3402.523 kb on - strand at 3402.572 kb on - strand at 3402.574 kb on - strand at 3402.623 kb on + strand at 3402.678 kb on - strand at 3402.679 kb on + strand at 3402.707 kb on - strand at 3402.873 kb on - strand at 3402.890 kb on - strand at 3403.005 kb on - strand at 3403.361 kb on - strand, within ABZR88_RS13610 at 3403.361 kb on - strand, within ABZR88_RS13610 at 3403.444 kb on - strand, within ABZR88_RS13610 at 3403.483 kb on + strand, within ABZR88_RS13610 at 3403.484 kb on - strand, within ABZR88_RS13610 at 3403.619 kb on + strand, within ABZR88_RS13610
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan (C) remove 3,399,886 + ABZR88_RS13600 0.27 -0.4 3,399,984 - ABZR88_RS13600 0.38 -0.5 3,400,044 + ABZR88_RS13600 0.44 -0.8 3,400,066 - ABZR88_RS13600 0.47 -0.2 3,400,277 + ABZR88_RS13600 0.69 +0.3 3,400,298 + ABZR88_RS13600 0.72 -0.3 3,400,299 - ABZR88_RS13600 0.72 -0.1 3,400,587 + +0.0 3,400,629 + -0.2 3,400,640 - +0.4 3,400,782 + +0.1 3,400,817 - +0.5 3,400,948 + +0.5 3,400,948 + -0.1 3,400,949 - +0.1 3,401,109 - ABZR88_RS13605 0.13 +0.0 3,401,173 + ABZR88_RS13605 0.16 -0.2 3,401,286 + ABZR88_RS13605 0.22 +0.2 3,401,376 + ABZR88_RS13605 0.27 +0.6 3,401,597 - ABZR88_RS13605 0.40 -0.3 3,401,598 + ABZR88_RS13605 0.40 -1.2 3,401,598 + ABZR88_RS13605 0.40 -0.3 3,401,701 + ABZR88_RS13605 0.46 -0.1 3,401,740 + ABZR88_RS13605 0.48 -0.0 3,401,814 + ABZR88_RS13605 0.52 -0.2 3,402,172 - ABZR88_RS13605 0.72 +0.0 3,402,173 + ABZR88_RS13605 0.72 -1.1 3,402,412 - ABZR88_RS13605 0.85 -0.1 3,402,523 - -1.0 3,402,572 - +0.2 3,402,574 - +0.9 3,402,623 + -0.4 3,402,678 - -0.2 3,402,679 + -0.5 3,402,707 - -0.1 3,402,873 - -1.1 3,402,890 - +0.6 3,403,005 - -0.1 3,403,361 - ABZR88_RS13610 0.21 -0.9 3,403,361 - ABZR88_RS13610 0.21 -1.0 3,403,444 - ABZR88_RS13610 0.24 -0.1 3,403,483 + ABZR88_RS13610 0.25 -0.3 3,403,484 - ABZR88_RS13610 0.25 -0.5 3,403,619 + ABZR88_RS13610 0.29 +0.2
Or see this region's nucleotide sequence