Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS05505

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS05495 and ABZR88_RS05500 are separated by 80 nucleotidesABZR88_RS05500 and ABZR88_RS05505 are separated by 60 nucleotidesABZR88_RS05505 and ABZR88_RS05510 are separated by 336 nucleotides ABZR88_RS05495: ABZR88_RS05495 - hypothetical protein, at 1,324,831 to 1,325,277 _RS05495 ABZR88_RS05500: ABZR88_RS05500 - DoxX family protein, at 1,325,358 to 1,325,834 _RS05500 ABZR88_RS05505: ABZR88_RS05505 - sulfite exporter TauE/SafE family protein, at 1,325,895 to 1,326,641 _RS05505 ABZR88_RS05510: ABZR88_RS05510 - MFS transporter, at 1,326,978 to 1,328,186 _RS05510 Position (kb) 1325 1326 1327Strain fitness (log2 ratio) -1 0 1 2at 1325.302 kb on - strandat 1325.884 kb on - strandat 1326.031 kb on + strand, within ABZR88_RS05505at 1326.032 kb on - strand, within ABZR88_RS05505at 1326.042 kb on - strand, within ABZR88_RS05505at 1326.178 kb on + strand, within ABZR88_RS05505at 1326.269 kb on + strand, within ABZR88_RS05505at 1326.397 kb on + strand, within ABZR88_RS05505at 1326.442 kb on - strand, within ABZR88_RS05505at 1326.536 kb on + strand, within ABZR88_RS05505at 1326.692 kb on - strandat 1326.835 kb on + strandat 1326.868 kb on - strandat 1326.872 kb on + strandat 1326.913 kb on - strandat 1327.034 kb on - strandat 1327.086 kb on - strandat 1327.185 kb on - strand, within ABZR88_RS05510at 1327.232 kb on + strand, within ABZR88_RS05510at 1327.251 kb on - strand, within ABZR88_RS05510at 1327.340 kb on - strand, within ABZR88_RS05510at 1327.355 kb on - strand, within ABZR88_RS05510at 1327.415 kb on + strand, within ABZR88_RS05510at 1327.416 kb on - strand, within ABZR88_RS05510at 1327.577 kb on + strand, within ABZR88_RS05510at 1327.577 kb on + strand, within ABZR88_RS05510at 1327.590 kb on - strand, within ABZR88_RS05510at 1327.601 kb on + strand, within ABZR88_RS05510

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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1,325,302 - +2.1
1,325,884 - +0.6
1,326,031 + ABZR88_RS05505 0.18 +0.2
1,326,032 - ABZR88_RS05505 0.18 -0.4
1,326,042 - ABZR88_RS05505 0.20 +0.2
1,326,178 + ABZR88_RS05505 0.38 +0.0
1,326,269 + ABZR88_RS05505 0.50 -0.7
1,326,397 + ABZR88_RS05505 0.67 -0.4
1,326,442 - ABZR88_RS05505 0.73 +0.2
1,326,536 + ABZR88_RS05505 0.86 -0.2
1,326,692 - -0.8
1,326,835 + +0.1
1,326,868 - +0.2
1,326,872 + +0.4
1,326,913 - -0.9
1,327,034 - -0.2
1,327,086 - +0.5
1,327,185 - ABZR88_RS05510 0.17 +0.4
1,327,232 + ABZR88_RS05510 0.21 +0.7
1,327,251 - ABZR88_RS05510 0.23 -0.3
1,327,340 - ABZR88_RS05510 0.30 -0.9
1,327,355 - ABZR88_RS05510 0.31 +0.2
1,327,415 + ABZR88_RS05510 0.36 +0.2
1,327,416 - ABZR88_RS05510 0.36 -0.2
1,327,577 + ABZR88_RS05510 0.50 -0.1
1,327,577 + ABZR88_RS05510 0.50 -0.7
1,327,590 - ABZR88_RS05510 0.51 -0.5
1,327,601 + ABZR88_RS05510 0.52 +0.9

Or see this region's nucleotide sequence