Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS21520

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS21515 and ABZR88_RS21520 are separated by 311 nucleotidesABZR88_RS21520 and ABZR88_RS21525 are separated by 200 nucleotides ABZR88_RS21515: ABZR88_RS21515 - hypothetical protein, at 5,169,379 to 5,169,909 _RS21515 ABZR88_RS21520: ABZR88_RS21520 - DUF4382 domain-containing protein, at 5,170,221 to 5,170,988 _RS21520 ABZR88_RS21525: ABZR88_RS21525 - DUF1080 domain-containing protein, at 5,171,189 to 5,172,028 _RS21525 Position (kb) 5170 5171Strain fitness (log2 ratio) -1 0 1 2at 5169.326 kb on - strandat 5169.328 kb on - strandat 5169.330 kb on + strandat 5169.332 kb on + strandat 5169.333 kb on - strandat 5169.447 kb on + strand, within ABZR88_RS21515at 5169.608 kb on - strand, within ABZR88_RS21515at 5169.613 kb on - strand, within ABZR88_RS21515at 5169.619 kb on + strand, within ABZR88_RS21515at 5169.742 kb on - strand, within ABZR88_RS21515at 5169.884 kb on - strandat 5169.893 kb on - strandat 5169.920 kb on - strandat 5170.200 kb on + strandat 5170.203 kb on - strandat 5170.331 kb on - strand, within ABZR88_RS21520at 5170.361 kb on - strand, within ABZR88_RS21520at 5170.507 kb on + strand, within ABZR88_RS21520at 5170.532 kb on + strand, within ABZR88_RS21520at 5170.690 kb on - strand, within ABZR88_RS21520at 5170.839 kb on - strand, within ABZR88_RS21520at 5170.902 kb on - strand, within ABZR88_RS21520at 5170.902 kb on - strand, within ABZR88_RS21520at 5170.992 kb on + strandat 5170.999 kb on - strandat 5171.132 kb on - strandat 5171.150 kb on + strandat 5171.152 kb on + strandat 5171.354 kb on - strand, within ABZR88_RS21525at 5171.433 kb on + strand, within ABZR88_RS21525at 5171.795 kb on + strand, within ABZR88_RS21525at 5171.944 kb on + strand, within ABZR88_RS21525at 5171.944 kb on + strand, within ABZR88_RS21525

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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5,169,326 - +0.7
5,169,328 - -0.3
5,169,330 + -1.0
5,169,332 + -0.6
5,169,333 - +0.1
5,169,447 + ABZR88_RS21515 0.13 -0.7
5,169,608 - ABZR88_RS21515 0.43 +0.3
5,169,613 - ABZR88_RS21515 0.44 -0.1
5,169,619 + ABZR88_RS21515 0.45 +0.0
5,169,742 - ABZR88_RS21515 0.68 -0.8
5,169,884 - -0.1
5,169,893 - -0.2
5,169,920 - +0.6
5,170,200 + +0.2
5,170,203 - -0.3
5,170,331 - ABZR88_RS21520 0.14 +0.1
5,170,361 - ABZR88_RS21520 0.18 +0.3
5,170,507 + ABZR88_RS21520 0.37 +0.4
5,170,532 + ABZR88_RS21520 0.40 -0.6
5,170,690 - ABZR88_RS21520 0.61 -0.7
5,170,839 - ABZR88_RS21520 0.80 -0.2
5,170,902 - ABZR88_RS21520 0.89 +0.0
5,170,902 - ABZR88_RS21520 0.89 -0.6
5,170,992 + -0.9
5,170,999 - +0.5
5,171,132 - +0.4
5,171,150 + +0.6
5,171,152 + +0.9
5,171,354 - ABZR88_RS21525 0.20 +0.2
5,171,433 + ABZR88_RS21525 0.29 +0.4
5,171,795 + ABZR88_RS21525 0.72 +2.1
5,171,944 + ABZR88_RS21525 0.90 -0.0
5,171,944 + ABZR88_RS21525 0.90 -0.1

Or see this region's nucleotide sequence