Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS14100

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS14090 and ABZR88_RS14095 overlap by 1 nucleotidesABZR88_RS14095 and ABZR88_RS14100 overlap by 4 nucleotidesABZR88_RS14100 and ABZR88_RS14105 overlap by 1 nucleotides ABZR88_RS14090: ABZR88_RS14090 - DUF5522 domain-containing protein, at 3,502,040 to 3,502,219 _RS14090 ABZR88_RS14095: ABZR88_RS14095 - MBL fold metallo-hydrolase, at 3,502,219 to 3,503,157 _RS14095 ABZR88_RS14100: ABZR88_RS14100 - dephospho-CoA kinase, at 3,503,154 to 3,503,744 _RS14100 ABZR88_RS14105: ABZR88_RS14105 - YbbR-like domain-containing protein, at 3,503,744 to 3,504,688 _RS14105 Position (kb) 3503 3504Strain fitness (log2 ratio) -2 -1 0 1at 3502.193 kb on - strand, within ABZR88_RS14090at 3502.198 kb on - strand, within ABZR88_RS14090at 3502.204 kb on + strandat 3502.268 kb on + strandat 3502.318 kb on + strand, within ABZR88_RS14095at 3502.333 kb on - strand, within ABZR88_RS14095at 3502.669 kb on + strand, within ABZR88_RS14095at 3502.677 kb on + strand, within ABZR88_RS14095at 3502.757 kb on - strand, within ABZR88_RS14095at 3502.875 kb on + strand, within ABZR88_RS14095at 3502.890 kb on + strand, within ABZR88_RS14095at 3502.897 kb on + strand, within ABZR88_RS14095at 3502.897 kb on + strand, within ABZR88_RS14095at 3502.898 kb on - strand, within ABZR88_RS14095at 3502.899 kb on + strand, within ABZR88_RS14095at 3502.904 kb on - strand, within ABZR88_RS14095at 3502.944 kb on + strand, within ABZR88_RS14095at 3502.984 kb on - strand, within ABZR88_RS14095at 3503.114 kb on + strandat 3503.115 kb on - strandat 3503.771 kb on - strandat 3503.838 kb on + strandat 3503.913 kb on - strand, within ABZR88_RS14105at 3504.154 kb on + strand, within ABZR88_RS14105at 3504.306 kb on + strand, within ABZR88_RS14105at 3504.307 kb on - strand, within ABZR88_RS14105at 3504.393 kb on + strand, within ABZR88_RS14105at 3504.398 kb on - strand, within ABZR88_RS14105at 3504.398 kb on - strand, within ABZR88_RS14105at 3504.398 kb on - strand, within ABZR88_RS14105at 3504.413 kb on - strand, within ABZR88_RS14105at 3504.573 kb on + strand, within ABZR88_RS14105at 3504.577 kb on + strand, within ABZR88_RS14105at 3504.579 kb on + strand, within ABZR88_RS14105at 3504.580 kb on - strand, within ABZR88_RS14105at 3504.634 kb on + strandat 3504.634 kb on - strandat 3504.710 kb on + strandat 3504.730 kb on - strandat 3504.743 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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3,502,193 - ABZR88_RS14090 0.85 +0.3
3,502,198 - ABZR88_RS14090 0.88 -1.1
3,502,204 + -0.6
3,502,268 + +0.2
3,502,318 + ABZR88_RS14095 0.11 -0.0
3,502,333 - ABZR88_RS14095 0.12 +1.4
3,502,669 + ABZR88_RS14095 0.48 +0.3
3,502,677 + ABZR88_RS14095 0.49 +0.2
3,502,757 - ABZR88_RS14095 0.57 +0.1
3,502,875 + ABZR88_RS14095 0.70 -0.4
3,502,890 + ABZR88_RS14095 0.71 +0.1
3,502,897 + ABZR88_RS14095 0.72 +0.2
3,502,897 + ABZR88_RS14095 0.72 +0.1
3,502,898 - ABZR88_RS14095 0.72 -0.2
3,502,899 + ABZR88_RS14095 0.72 +0.2
3,502,904 - ABZR88_RS14095 0.73 +0.7
3,502,944 + ABZR88_RS14095 0.77 -0.1
3,502,984 - ABZR88_RS14095 0.81 -0.3
3,503,114 + +0.2
3,503,115 - +0.3
3,503,771 - +0.2
3,503,838 + -0.4
3,503,913 - ABZR88_RS14105 0.18 +1.7
3,504,154 + ABZR88_RS14105 0.43 -0.1
3,504,306 + ABZR88_RS14105 0.59 -0.2
3,504,307 - ABZR88_RS14105 0.60 +0.9
3,504,393 + ABZR88_RS14105 0.69 -0.6
3,504,398 - ABZR88_RS14105 0.69 -0.3
3,504,398 - ABZR88_RS14105 0.69 -0.3
3,504,398 - ABZR88_RS14105 0.69 +0.1
3,504,413 - ABZR88_RS14105 0.71 -0.3
3,504,573 + ABZR88_RS14105 0.88 -0.8
3,504,577 + ABZR88_RS14105 0.88 +0.2
3,504,579 + ABZR88_RS14105 0.88 -1.9
3,504,580 - ABZR88_RS14105 0.88 +0.1
3,504,634 + -0.2
3,504,634 - -0.3
3,504,710 + -0.6
3,504,730 - +0.1
3,504,743 + -0.1

Or see this region's nucleotide sequence