Experiment: Beta-Lactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS20625 and ABZR88_RS20630 are separated by 84 nucleotides ABZR88_RS20630 and ABZR88_RS20635 are separated by 12 nucleotides ABZR88_RS20635 and ABZR88_RS20640 are separated by 23 nucleotides ABZR88_RS20640 and ABZR88_RS20645 are separated by 3 nucleotides
ABZR88_RS20625: ABZR88_RS20625 - gamma carbonic anhydrase family protein, at 4,993,455 to 4,993,967
_RS20625
ABZR88_RS20630: ABZR88_RS20630 - tRNA-Gly, at 4,994,052 to 4,994,124
_RS20630
ABZR88_RS20635: ABZR88_RS20635 - hypothetical protein, at 4,994,137 to 4,994,571
_RS20635
ABZR88_RS20640: ABZR88_RS20640 - hypothetical protein, at 4,994,595 to 4,995,362
_RS20640
ABZR88_RS20645: ABZR88_RS20645 - L-aspartate oxidase, at 4,995,366 to 4,996,958
_RS20645
Position (kb) 4994
4995
4996 Strain fitness (log2 ratio) -1
0
1 at 4993.710 kb on - strand, within ABZR88_RS20625 at 4993.716 kb on - strand, within ABZR88_RS20625 at 4993.763 kb on - strand, within ABZR88_RS20625 at 4993.824 kb on - strand, within ABZR88_RS20625 at 4993.854 kb on + strand, within ABZR88_RS20625 at 4993.940 kb on + strand at 4994.037 kb on + strand at 4994.037 kb on + strand at 4994.042 kb on + strand at 4994.216 kb on - strand, within ABZR88_RS20635 at 4994.282 kb on + strand, within ABZR88_RS20635 at 4994.447 kb on - strand, within ABZR88_RS20635 at 4994.465 kb on + strand, within ABZR88_RS20635 at 4994.527 kb on - strand, within ABZR88_RS20635 at 4994.550 kb on - strand at 4994.550 kb on - strand at 4994.579 kb on + strand at 4994.679 kb on + strand, within ABZR88_RS20640 at 4994.808 kb on + strand, within ABZR88_RS20640 at 4994.812 kb on - strand, within ABZR88_RS20640 at 4995.009 kb on - strand, within ABZR88_RS20640 at 4995.062 kb on + strand, within ABZR88_RS20640 at 4995.067 kb on + strand, within ABZR88_RS20640 at 4995.147 kb on + strand, within ABZR88_RS20640 at 4995.294 kb on + strand at 4995.363 kb on - strand at 4995.373 kb on - strand at 4995.419 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose (C) remove 4,993,710 - ABZR88_RS20625 0.50 +1.3 4,993,716 - ABZR88_RS20625 0.51 -0.8 4,993,763 - ABZR88_RS20625 0.60 -0.3 4,993,824 - ABZR88_RS20625 0.72 -0.2 4,993,854 + ABZR88_RS20625 0.78 +0.1 4,993,940 + -0.0 4,994,037 + +0.3 4,994,037 + +0.0 4,994,042 + +0.1 4,994,216 - ABZR88_RS20635 0.18 +1.1 4,994,282 + ABZR88_RS20635 0.33 +1.1 4,994,447 - ABZR88_RS20635 0.71 -0.7 4,994,465 + ABZR88_RS20635 0.75 +0.4 4,994,527 - ABZR88_RS20635 0.90 -0.7 4,994,550 - +0.1 4,994,550 - +0.2 4,994,579 + +0.5 4,994,679 + ABZR88_RS20640 0.11 +0.2 4,994,808 + ABZR88_RS20640 0.28 +0.1 4,994,812 - ABZR88_RS20640 0.28 +0.4 4,995,009 - ABZR88_RS20640 0.54 +0.1 4,995,062 + ABZR88_RS20640 0.61 +1.6 4,995,067 + ABZR88_RS20640 0.61 -0.6 4,995,147 + ABZR88_RS20640 0.72 +0.1 4,995,294 + +0.0 4,995,363 - -0.4 4,995,373 - +0.2 4,995,419 - -0.7
Or see this region's nucleotide sequence