Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS11370

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS11365 and ABZR88_RS11370 are separated by 191 nucleotidesABZR88_RS11370 and ABZR88_RS11375 are separated by 662 nucleotides ABZR88_RS11365: ABZR88_RS11365 - metallophosphoesterase, at 2,796,378 to 2,797,562 _RS11365 ABZR88_RS11370: ABZR88_RS11370 - two-component regulator propeller domain-containing protein, at 2,797,754 to 2,802,121 _RS11370 ABZR88_RS11375: ABZR88_RS11375 - TonB-dependent receptor, at 2,802,784 to 2,805,795 _RS11375 Position (kb) 2797 2798 2799 2800 2801 2802 2803Strain fitness (log2 ratio) -1 0 1 2at 2796.772 kb on + strand, within ABZR88_RS11365at 2797.193 kb on - strand, within ABZR88_RS11365at 2797.336 kb on + strand, within ABZR88_RS11365at 2797.337 kb on - strand, within ABZR88_RS11365at 2797.416 kb on + strand, within ABZR88_RS11365at 2797.420 kb on + strand, within ABZR88_RS11365at 2797.422 kb on + strand, within ABZR88_RS11365at 2797.561 kb on - strandat 2797.651 kb on + strandat 2797.662 kb on - strandat 2797.669 kb on - strandat 2797.692 kb on + strandat 2798.086 kb on + strandat 2798.146 kb on + strandat 2798.257 kb on - strand, within ABZR88_RS11370at 2798.269 kb on + strand, within ABZR88_RS11370at 2798.286 kb on + strand, within ABZR88_RS11370at 2798.287 kb on - strand, within ABZR88_RS11370at 2798.468 kb on + strand, within ABZR88_RS11370at 2798.489 kb on + strand, within ABZR88_RS11370at 2798.636 kb on - strand, within ABZR88_RS11370at 2798.743 kb on - strand, within ABZR88_RS11370at 2799.151 kb on + strand, within ABZR88_RS11370at 2799.283 kb on + strand, within ABZR88_RS11370at 2799.437 kb on + strand, within ABZR88_RS11370at 2799.642 kb on + strand, within ABZR88_RS11370at 2799.643 kb on - strand, within ABZR88_RS11370at 2799.646 kb on - strand, within ABZR88_RS11370at 2799.724 kb on + strand, within ABZR88_RS11370at 2799.834 kb on - strand, within ABZR88_RS11370at 2799.841 kb on - strand, within ABZR88_RS11370at 2799.932 kb on + strand, within ABZR88_RS11370at 2799.933 kb on - strand, within ABZR88_RS11370at 2800.007 kb on - strand, within ABZR88_RS11370at 2800.138 kb on + strand, within ABZR88_RS11370at 2800.155 kb on + strand, within ABZR88_RS11370at 2800.317 kb on - strand, within ABZR88_RS11370at 2800.446 kb on - strand, within ABZR88_RS11370at 2800.454 kb on + strand, within ABZR88_RS11370at 2800.454 kb on + strand, within ABZR88_RS11370at 2800.537 kb on - strand, within ABZR88_RS11370at 2800.767 kb on + strand, within ABZR88_RS11370at 2800.922 kb on + strand, within ABZR88_RS11370at 2800.972 kb on - strand, within ABZR88_RS11370at 2801.078 kb on + strand, within ABZR88_RS11370at 2801.175 kb on + strand, within ABZR88_RS11370at 2801.176 kb on - strand, within ABZR88_RS11370at 2801.205 kb on + strand, within ABZR88_RS11370at 2801.315 kb on - strand, within ABZR88_RS11370at 2801.424 kb on - strand, within ABZR88_RS11370at 2801.508 kb on + strand, within ABZR88_RS11370at 2801.532 kb on + strand, within ABZR88_RS11370at 2801.740 kb on - strandat 2801.799 kb on + strandat 2801.814 kb on + strandat 2801.837 kb on - strandat 2802.095 kb on + strandat 2802.123 kb on - strandat 2802.246 kb on + strandat 2802.330 kb on - strandat 2802.385 kb on - strandat 2802.405 kb on + strandat 2802.405 kb on + strandat 2802.582 kb on + strandat 2802.954 kb on - strandat 2802.964 kb on + strandat 2803.071 kb on - strandat 2803.080 kb on + strandat 2803.109 kb on + strand, within ABZR88_RS11375

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,796,772 + ABZR88_RS11365 0.33 -0.5
2,797,193 - ABZR88_RS11365 0.69 -0.8
2,797,336 + ABZR88_RS11365 0.81 +0.1
2,797,337 - ABZR88_RS11365 0.81 +0.1
2,797,416 + ABZR88_RS11365 0.88 -0.2
2,797,420 + ABZR88_RS11365 0.88 -0.1
2,797,422 + ABZR88_RS11365 0.88 -0.2
2,797,561 - +0.3
2,797,651 + -0.3
2,797,662 - +0.2
2,797,669 - +0.1
2,797,692 + +0.1
2,798,086 + +0.3
2,798,146 + -0.2
2,798,257 - ABZR88_RS11370 0.12 +0.1
2,798,269 + ABZR88_RS11370 0.12 -0.1
2,798,286 + ABZR88_RS11370 0.12 -1.0
2,798,287 - ABZR88_RS11370 0.12 -0.0
2,798,468 + ABZR88_RS11370 0.16 -0.1
2,798,489 + ABZR88_RS11370 0.17 +1.0
2,798,636 - ABZR88_RS11370 0.20 +0.0
2,798,743 - ABZR88_RS11370 0.23 +0.6
2,799,151 + ABZR88_RS11370 0.32 +0.2
2,799,283 + ABZR88_RS11370 0.35 -0.6
2,799,437 + ABZR88_RS11370 0.39 +0.2
2,799,642 + ABZR88_RS11370 0.43 -0.1
2,799,643 - ABZR88_RS11370 0.43 +0.0
2,799,646 - ABZR88_RS11370 0.43 -0.1
2,799,724 + ABZR88_RS11370 0.45 -0.3
2,799,834 - ABZR88_RS11370 0.48 +0.3
2,799,841 - ABZR88_RS11370 0.48 -0.4
2,799,932 + ABZR88_RS11370 0.50 -0.0
2,799,933 - ABZR88_RS11370 0.50 +0.5
2,800,007 - ABZR88_RS11370 0.52 -1.4
2,800,138 + ABZR88_RS11370 0.55 +0.2
2,800,155 + ABZR88_RS11370 0.55 +0.5
2,800,317 - ABZR88_RS11370 0.59 +0.6
2,800,446 - ABZR88_RS11370 0.62 -0.2
2,800,454 + ABZR88_RS11370 0.62 +0.4
2,800,454 + ABZR88_RS11370 0.62 -0.1
2,800,537 - ABZR88_RS11370 0.64 -0.1
2,800,767 + ABZR88_RS11370 0.69 -0.4
2,800,922 + ABZR88_RS11370 0.73 -0.0
2,800,972 - ABZR88_RS11370 0.74 -0.3
2,801,078 + ABZR88_RS11370 0.76 +0.9
2,801,175 + ABZR88_RS11370 0.78 -0.1
2,801,176 - ABZR88_RS11370 0.78 -0.2
2,801,205 + ABZR88_RS11370 0.79 +0.0
2,801,315 - ABZR88_RS11370 0.82 +0.5
2,801,424 - ABZR88_RS11370 0.84 +0.6
2,801,508 + ABZR88_RS11370 0.86 +0.1
2,801,532 + ABZR88_RS11370 0.86 -0.1
2,801,740 - +2.0
2,801,799 + +0.9
2,801,814 + +0.1
2,801,837 - +0.3
2,802,095 + -0.3
2,802,123 - -0.6
2,802,246 + -0.2
2,802,330 - -0.2
2,802,385 - +0.2
2,802,405 + +0.3
2,802,405 + -0.1
2,802,582 + +0.6
2,802,954 - +0.1
2,802,964 + -0.2
2,803,071 - -0.3
2,803,080 + +0.2
2,803,109 + ABZR88_RS11375 0.11 -0.7

Or see this region's nucleotide sequence