Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS11365 and ABZR88_RS11370 are separated by 191 nucleotides ABZR88_RS11370 and ABZR88_RS11375 are separated by 662 nucleotides
ABZR88_RS11365: ABZR88_RS11365 - metallophosphoesterase, at 2,796,378 to 2,797,562
_RS11365
ABZR88_RS11370: ABZR88_RS11370 - two-component regulator propeller domain-containing protein, at 2,797,754 to 2,802,121
_RS11370
ABZR88_RS11375: ABZR88_RS11375 - TonB-dependent receptor, at 2,802,784 to 2,805,795
_RS11375
Position (kb)
2797
2798
2799
2800
2801
2802
2803 Strain fitness (log2 ratio)
-1
0
1
2 at 2796.772 kb on + strand, within ABZR88_RS11365 at 2797.193 kb on - strand, within ABZR88_RS11365 at 2797.336 kb on + strand, within ABZR88_RS11365 at 2797.337 kb on - strand, within ABZR88_RS11365 at 2797.416 kb on + strand, within ABZR88_RS11365 at 2797.420 kb on + strand, within ABZR88_RS11365 at 2797.422 kb on + strand, within ABZR88_RS11365 at 2797.561 kb on - strand at 2797.651 kb on + strand at 2797.662 kb on - strand at 2797.669 kb on - strand at 2797.692 kb on + strand at 2798.086 kb on + strand at 2798.146 kb on + strand at 2798.257 kb on - strand, within ABZR88_RS11370 at 2798.269 kb on + strand, within ABZR88_RS11370 at 2798.286 kb on + strand, within ABZR88_RS11370 at 2798.287 kb on - strand, within ABZR88_RS11370 at 2798.468 kb on + strand, within ABZR88_RS11370 at 2798.489 kb on + strand, within ABZR88_RS11370 at 2798.636 kb on - strand, within ABZR88_RS11370 at 2798.743 kb on - strand, within ABZR88_RS11370 at 2799.151 kb on + strand, within ABZR88_RS11370 at 2799.283 kb on + strand, within ABZR88_RS11370 at 2799.437 kb on + strand, within ABZR88_RS11370 at 2799.642 kb on + strand, within ABZR88_RS11370 at 2799.643 kb on - strand, within ABZR88_RS11370 at 2799.646 kb on - strand, within ABZR88_RS11370 at 2799.724 kb on + strand, within ABZR88_RS11370 at 2799.834 kb on - strand, within ABZR88_RS11370 at 2799.841 kb on - strand, within ABZR88_RS11370 at 2799.932 kb on + strand, within ABZR88_RS11370 at 2799.933 kb on - strand, within ABZR88_RS11370 at 2800.007 kb on - strand, within ABZR88_RS11370 at 2800.138 kb on + strand, within ABZR88_RS11370 at 2800.155 kb on + strand, within ABZR88_RS11370 at 2800.317 kb on - strand, within ABZR88_RS11370 at 2800.446 kb on - strand, within ABZR88_RS11370 at 2800.454 kb on + strand, within ABZR88_RS11370 at 2800.454 kb on + strand, within ABZR88_RS11370 at 2800.537 kb on - strand, within ABZR88_RS11370 at 2800.767 kb on + strand, within ABZR88_RS11370 at 2800.922 kb on + strand, within ABZR88_RS11370 at 2800.972 kb on - strand, within ABZR88_RS11370 at 2801.078 kb on + strand, within ABZR88_RS11370 at 2801.175 kb on + strand, within ABZR88_RS11370 at 2801.176 kb on - strand, within ABZR88_RS11370 at 2801.205 kb on + strand, within ABZR88_RS11370 at 2801.315 kb on - strand, within ABZR88_RS11370 at 2801.424 kb on - strand, within ABZR88_RS11370 at 2801.508 kb on + strand, within ABZR88_RS11370 at 2801.532 kb on + strand, within ABZR88_RS11370 at 2801.740 kb on - strand at 2801.799 kb on + strand at 2801.814 kb on + strand at 2801.837 kb on - strand at 2802.095 kb on + strand at 2802.123 kb on - strand at 2802.246 kb on + strand at 2802.330 kb on - strand at 2802.385 kb on - strand at 2802.405 kb on + strand at 2802.405 kb on + strand at 2802.582 kb on + strand at 2802.954 kb on - strand at 2802.964 kb on + strand at 2803.071 kb on - strand at 2803.080 kb on + strand at 2803.109 kb on + strand, within ABZR88_RS11375
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,796,772 + ABZR88_RS11365 0.33 -0.5 2,797,193 - ABZR88_RS11365 0.69 -0.8 2,797,336 + ABZR88_RS11365 0.81 +0.1 2,797,337 - ABZR88_RS11365 0.81 +0.1 2,797,416 + ABZR88_RS11365 0.88 -0.2 2,797,420 + ABZR88_RS11365 0.88 -0.1 2,797,422 + ABZR88_RS11365 0.88 -0.2 2,797,561 - +0.3 2,797,651 + -0.3 2,797,662 - +0.2 2,797,669 - +0.1 2,797,692 + +0.1 2,798,086 + +0.3 2,798,146 + -0.2 2,798,257 - ABZR88_RS11370 0.12 +0.1 2,798,269 + ABZR88_RS11370 0.12 -0.1 2,798,286 + ABZR88_RS11370 0.12 -1.0 2,798,287 - ABZR88_RS11370 0.12 -0.0 2,798,468 + ABZR88_RS11370 0.16 -0.1 2,798,489 + ABZR88_RS11370 0.17 +1.0 2,798,636 - ABZR88_RS11370 0.20 +0.0 2,798,743 - ABZR88_RS11370 0.23 +0.6 2,799,151 + ABZR88_RS11370 0.32 +0.2 2,799,283 + ABZR88_RS11370 0.35 -0.6 2,799,437 + ABZR88_RS11370 0.39 +0.2 2,799,642 + ABZR88_RS11370 0.43 -0.1 2,799,643 - ABZR88_RS11370 0.43 +0.0 2,799,646 - ABZR88_RS11370 0.43 -0.1 2,799,724 + ABZR88_RS11370 0.45 -0.3 2,799,834 - ABZR88_RS11370 0.48 +0.3 2,799,841 - ABZR88_RS11370 0.48 -0.4 2,799,932 + ABZR88_RS11370 0.50 -0.0 2,799,933 - ABZR88_RS11370 0.50 +0.5 2,800,007 - ABZR88_RS11370 0.52 -1.4 2,800,138 + ABZR88_RS11370 0.55 +0.2 2,800,155 + ABZR88_RS11370 0.55 +0.5 2,800,317 - ABZR88_RS11370 0.59 +0.6 2,800,446 - ABZR88_RS11370 0.62 -0.2 2,800,454 + ABZR88_RS11370 0.62 +0.4 2,800,454 + ABZR88_RS11370 0.62 -0.1 2,800,537 - ABZR88_RS11370 0.64 -0.1 2,800,767 + ABZR88_RS11370 0.69 -0.4 2,800,922 + ABZR88_RS11370 0.73 -0.0 2,800,972 - ABZR88_RS11370 0.74 -0.3 2,801,078 + ABZR88_RS11370 0.76 +0.9 2,801,175 + ABZR88_RS11370 0.78 -0.1 2,801,176 - ABZR88_RS11370 0.78 -0.2 2,801,205 + ABZR88_RS11370 0.79 +0.0 2,801,315 - ABZR88_RS11370 0.82 +0.5 2,801,424 - ABZR88_RS11370 0.84 +0.6 2,801,508 + ABZR88_RS11370 0.86 +0.1 2,801,532 + ABZR88_RS11370 0.86 -0.1 2,801,740 - +2.0 2,801,799 + +0.9 2,801,814 + +0.1 2,801,837 - +0.3 2,802,095 + -0.3 2,802,123 - -0.6 2,802,246 + -0.2 2,802,330 - -0.2 2,802,385 - +0.2 2,802,405 + +0.3 2,802,405 + -0.1 2,802,582 + +0.6 2,802,954 - +0.1 2,802,964 + -0.2 2,803,071 - -0.3 2,803,080 + +0.2 2,803,109 + ABZR88_RS11375 0.11 -0.7
Or see this region's nucleotide sequence