Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02455 and ABZR88_RS02460 are separated by 120 nucleotides ABZR88_RS02460 and ABZR88_RS02465 are separated by 455 nucleotides
ABZR88_RS02455: ABZR88_RS02455 - relaxase/mobilization nuclease domain-containing protein, at 562,587 to 564,122
_RS02455
ABZR88_RS02460: ABZR88_RS02460 - hypothetical protein, at 564,243 to 564,476
_RS02460
ABZR88_RS02465: ABZR88_RS02465 - plasmid transfer protein, at 564,932 to 566,080
_RS02465
Position (kb) 564
565 Strain fitness (log2 ratio) -1
0
1 at 563.261 kb on + strand, within ABZR88_RS02455 at 563.301 kb on - strand, within ABZR88_RS02455 at 563.373 kb on - strand, within ABZR88_RS02455 at 563.443 kb on - strand, within ABZR88_RS02455 at 563.669 kb on + strand, within ABZR88_RS02455 at 563.800 kb on + strand, within ABZR88_RS02455 at 563.823 kb on - strand, within ABZR88_RS02455 at 564.018 kb on + strand at 564.221 kb on + strand at 564.309 kb on + strand, within ABZR88_RS02460 at 564.381 kb on + strand, within ABZR88_RS02460 at 564.382 kb on - strand, within ABZR88_RS02460 at 564.682 kb on - strand at 564.694 kb on - strand at 564.795 kb on + strand at 564.837 kb on + strand at 564.839 kb on + strand at 564.948 kb on + strand at 564.949 kb on - strand at 565.054 kb on + strand, within ABZR88_RS02465 at 565.055 kb on - strand, within ABZR88_RS02465 at 565.063 kb on + strand, within ABZR88_RS02465 at 565.063 kb on + strand, within ABZR88_RS02465 at 565.088 kb on - strand, within ABZR88_RS02465 at 565.113 kb on + strand, within ABZR88_RS02465 at 565.219 kb on - strand, within ABZR88_RS02465 at 565.260 kb on + strand, within ABZR88_RS02465
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 563,261 + ABZR88_RS02455 0.44 -0.4 563,301 - ABZR88_RS02455 0.46 -0.1 563,373 - ABZR88_RS02455 0.51 -0.1 563,443 - ABZR88_RS02455 0.56 -0.0 563,669 + ABZR88_RS02455 0.70 -0.8 563,800 + ABZR88_RS02455 0.79 +0.6 563,823 - ABZR88_RS02455 0.80 -0.2 564,018 + -1.3 564,221 + -0.1 564,309 + ABZR88_RS02460 0.28 +0.5 564,381 + ABZR88_RS02460 0.59 +0.4 564,382 - ABZR88_RS02460 0.59 -0.0 564,682 - -0.2 564,694 - +0.5 564,795 + +0.3 564,837 + +0.5 564,839 + +0.2 564,948 + -0.3 564,949 - -0.6 565,054 + ABZR88_RS02465 0.11 +0.2 565,055 - ABZR88_RS02465 0.11 -0.1 565,063 + ABZR88_RS02465 0.11 +0.1 565,063 + ABZR88_RS02465 0.11 -1.2 565,088 - ABZR88_RS02465 0.14 +0.7 565,113 + ABZR88_RS02465 0.16 +0.2 565,219 - ABZR88_RS02465 0.25 +0.3 565,260 + ABZR88_RS02465 0.29 -0.2
Or see this region's nucleotide sequence