Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS11685

Experiment: L-Arabinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS11675 and ABZR88_RS11680 are separated by 111 nucleotidesABZR88_RS11680 and ABZR88_RS11685 are separated by 110 nucleotidesABZR88_RS11685 and ABZR88_RS11690 are separated by 59 nucleotidesABZR88_RS11690 and ABZR88_RS11695 are separated by 147 nucleotides ABZR88_RS11675: ABZR88_RS11675 - alpha/beta fold hydrolase, at 2,873,542 to 2,874,822 _RS11675 ABZR88_RS11680: ABZR88_RS11680 - DinB family protein, at 2,874,934 to 2,875,404 _RS11680 ABZR88_RS11685: ABZR88_RS11685 - DUF885 domain-containing protein, at 2,875,515 to 2,877,287 _RS11685 ABZR88_RS11690: ABZR88_RS11690 - YXWGXW repeat-containing protein, at 2,877,347 to 2,877,649 _RS11690 ABZR88_RS11695: ABZR88_RS11695 - SGNH/GDSL hydrolase family protein, at 2,877,797 to 2,878,870 _RS11695 Position (kb) 2875 2876 2877 2878Strain fitness (log2 ratio) -1 0 1 2at 2875.126 kb on - strand, within ABZR88_RS11680at 2875.126 kb on - strand, within ABZR88_RS11680at 2875.224 kb on + strand, within ABZR88_RS11680at 2875.245 kb on + strand, within ABZR88_RS11680at 2875.488 kb on + strandat 2875.500 kb on + strandat 2875.528 kb on + strandat 2875.529 kb on - strandat 2875.610 kb on + strandat 2875.610 kb on + strandat 2875.699 kb on - strand, within ABZR88_RS11685at 2875.884 kb on + strand, within ABZR88_RS11685at 2875.932 kb on - strand, within ABZR88_RS11685at 2876.013 kb on - strand, within ABZR88_RS11685at 2876.268 kb on + strand, within ABZR88_RS11685at 2876.283 kb on - strand, within ABZR88_RS11685at 2876.353 kb on + strand, within ABZR88_RS11685at 2876.370 kb on - strand, within ABZR88_RS11685at 2876.375 kb on + strand, within ABZR88_RS11685at 2876.452 kb on + strand, within ABZR88_RS11685at 2876.453 kb on - strand, within ABZR88_RS11685at 2876.601 kb on + strand, within ABZR88_RS11685at 2876.784 kb on + strand, within ABZR88_RS11685at 2876.786 kb on + strand, within ABZR88_RS11685at 2876.787 kb on - strand, within ABZR88_RS11685at 2876.972 kb on - strand, within ABZR88_RS11685at 2877.248 kb on + strandat 2877.345 kb on + strandat 2877.346 kb on - strandat 2877.456 kb on + strand, within ABZR88_RS11690at 2877.457 kb on - strand, within ABZR88_RS11690at 2877.559 kb on + strand, within ABZR88_RS11690at 2877.670 kb on - strandat 2877.672 kb on - strandat 2877.791 kb on - strandat 2877.888 kb on - strandat 2877.888 kb on - strandat 2877.955 kb on + strand, within ABZR88_RS11695at 2878.022 kb on - strand, within ABZR88_RS11695at 2878.252 kb on + strand, within ABZR88_RS11695at 2878.273 kb on - strand, within ABZR88_RS11695

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arabinose (C)
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2,875,126 - ABZR88_RS11680 0.41 -0.3
2,875,126 - ABZR88_RS11680 0.41 -1.3
2,875,224 + ABZR88_RS11680 0.62 -0.3
2,875,245 + ABZR88_RS11680 0.66 -0.8
2,875,488 + -0.3
2,875,500 + +0.0
2,875,528 + -0.1
2,875,529 - +1.1
2,875,610 + -0.4
2,875,610 + +2.7
2,875,699 - ABZR88_RS11685 0.10 -0.7
2,875,884 + ABZR88_RS11685 0.21 -0.4
2,875,932 - ABZR88_RS11685 0.24 +0.1
2,876,013 - ABZR88_RS11685 0.28 -0.5
2,876,268 + ABZR88_RS11685 0.42 +0.7
2,876,283 - ABZR88_RS11685 0.43 +0.2
2,876,353 + ABZR88_RS11685 0.47 -0.2
2,876,370 - ABZR88_RS11685 0.48 -0.1
2,876,375 + ABZR88_RS11685 0.49 -0.6
2,876,452 + ABZR88_RS11685 0.53 -0.5
2,876,453 - ABZR88_RS11685 0.53 -1.2
2,876,601 + ABZR88_RS11685 0.61 +0.3
2,876,784 + ABZR88_RS11685 0.72 +0.8
2,876,786 + ABZR88_RS11685 0.72 +0.0
2,876,787 - ABZR88_RS11685 0.72 -0.4
2,876,972 - ABZR88_RS11685 0.82 -0.1
2,877,248 + -0.4
2,877,345 + -0.0
2,877,346 - -0.4
2,877,456 + ABZR88_RS11690 0.36 -1.2
2,877,457 - ABZR88_RS11690 0.36 -0.2
2,877,559 + ABZR88_RS11690 0.70 +0.1
2,877,670 - +1.1
2,877,672 - -0.3
2,877,791 - +0.4
2,877,888 - -0.3
2,877,888 - -1.2
2,877,955 + ABZR88_RS11695 0.15 -0.4
2,878,022 - ABZR88_RS11695 0.21 -0.4
2,878,252 + ABZR88_RS11695 0.42 +0.1
2,878,273 - ABZR88_RS11695 0.44 +0.2

Or see this region's nucleotide sequence