Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04945

Experiment: R2A_PIPES; no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES; no stress control
1,072,354	+		OKGIIK_04935	0.65	-2.2
1,072,354	+		OKGIIK_04935	0.65	+3.9
1,072,354	+		OKGIIK_04935	0.65	-0.6
1,072,355	-		OKGIIK_04935	0.65	+0.5
1,072,369	+		OKGIIK_04935	0.66	-2.2
1,072,369	+		OKGIIK_04935	0.66	-1.0
1,072,369	+		OKGIIK_04935	0.66	-1.2
1,072,369	+		OKGIIK_04935	0.66	-0.3
1,072,370	-		OKGIIK_04935	0.66	+0.8
1,072,370	-		OKGIIK_04935	0.66	-1.2
1,072,370	-		OKGIIK_04935	0.66	+0.4
1,072,370	-		OKGIIK_04935	0.66	-0.0
1,072,433	-		OKGIIK_04935	0.73	-0.3
1,072,457	+		OKGIIK_04935	0.75	-1.0
1,072,492	+		OKGIIK_04935	0.79	-2.0
1,072,492	+		OKGIIK_04935	0.79	-1.9
1,072,492	+		OKGIIK_04935	0.79	-0.8
1,072,492	+		OKGIIK_04935	0.79	-2.5
1,072,492	+		OKGIIK_04935	0.79	-1.7
1,072,492	+		OKGIIK_04935	0.79	+0.5
1,072,492	+		OKGIIK_04935	0.79	+0.3
1,072,493	-		OKGIIK_04935	0.79	+1.1
1,072,493	-		OKGIIK_04935	0.79	+0.1
1,072,493	-		OKGIIK_04935	0.79	-2.0
1,072,493	-		OKGIIK_04935	0.79	+2.7
1,072,493	-		OKGIIK_04935	0.79	+1.1
1,072,493	-		OKGIIK_04935	0.79	-1.7
1,072,493	-		OKGIIK_04935	0.79	-1.4
1,072,493	-		OKGIIK_04935	0.79	-0.8
1,072,493	-		OKGIIK_04935	0.79	-0.9
1,072,493	-		OKGIIK_04935	0.79	-1.7
1,072,493	-		OKGIIK_04935	0.79	-0.8
1,072,493	-		OKGIIK_04935	0.79	-1.3
1,072,493	-		OKGIIK_04935	0.79	-1.5
1,072,493	-		OKGIIK_04935	0.79	-0.9
1,072,493	-		OKGIIK_04935	0.79	-0.5
1,072,493	-		OKGIIK_04935	0.79	+1.1
1,072,534	+		OKGIIK_04935	0.83	+1.4
1,072,534	+		OKGIIK_04935	0.83	-0.7
1,072,534	+		OKGIIK_04935	0.83	-1.8
1,072,534	+		OKGIIK_04935	0.83	+0.1
1,072,535	-		OKGIIK_04935	0.83	-0.6
1,072,535	-		OKGIIK_04935	0.83	-2.1
1,072,535	-		OKGIIK_04935	0.83	+1.7
1,072,535	-		OKGIIK_04935	0.83	+1.1
1,072,690	+				-0.9
1,072,690	+				-0.9
1,072,690	+				-0.9
1,072,691	-				-0.1
1,072,691	-				-2.2
1,072,691	-				+0.7
1,072,691	-				-0.3
1,072,691	-				-0.7
1,072,691	-				-2.6
1,072,691	-				-0.1
1,072,691	-				-0.5
1,072,691	-				-0.4
1,072,691	-				-0.9
1,072,691	-				-0.2
1,072,691	-				-0.7
1,072,835	+				-1.9
1,072,835	+				+0.5
1,072,836	-				-1.3
1,072,912	+				-0.6
1,072,912	+				-2.6
1,072,912	+				+0.1
1,072,912	+				+0.0
1,072,912	+				-0.8
1,072,912	+				+0.4
1,072,913	-				-0.5
1,072,913	-				+0.4
1,072,913	-				+1.1
1,072,913	-				-0.9
1,072,913	-				-0.0
1,072,913	-				+0.2
1,072,962	+				-0.1
1,072,962	+				+0.4
1,072,962	+				+0.1
1,072,962	+				-1.0
1,072,962	+				-2.0
1,072,962	+				+0.5
1,072,962	+				-0.2
1,072,963	-				-0.8
1,072,963	-				-1.9
1,072,963	-				-0.8
1,072,963	-				-2.2
1,072,963	-				-0.5
1,073,159	+	yerC	OKGIIK_04940	0.48	-2.2
1,073,248	+	yerC	OKGIIK_04940	0.74	-0.3
1,073,248	+	yerC	OKGIIK_04940	0.74	-1.3
1,073,249	-	yerC	OKGIIK_04940	0.74	-0.9
1,073,249	-	yerC	OKGIIK_04940	0.74	+1.1
1,073,272	+	yerC	OKGIIK_04940	0.81	-2.0
1,073,272	+	yerC	OKGIIK_04940	0.81	-1.4
1,073,273	-	yerC	OKGIIK_04940	0.82	+0.1
1,073,671	-	hisG	OKGIIK_04945	0.38	-0.9
1,073,671	-	hisG	OKGIIK_04945	0.38	+1.1
1,073,671	-	hisG	OKGIIK_04945	0.38	-1.5
1,073,716	-	hisG	OKGIIK_04945	0.43	-1.5
1,073,716	-	hisG	OKGIIK_04945	0.43	-0.3
1,073,849	+	hisG	OKGIIK_04945	0.58	-1.7
1,074,415	+	hisD	OKGIIK_04950	0.12	+0.9
1,074,415	+	hisD	OKGIIK_04950	0.12	-1.6
1,074,415	+	hisD	OKGIIK_04950	0.12	-0.6
1,074,415	+	hisD	OKGIIK_04950	0.12	-0.3
1,074,415	+	hisD	OKGIIK_04950	0.12	-3.0
1,074,533	+	hisD	OKGIIK_04950	0.22	-2.0
1,074,533	+	hisD	OKGIIK_04950	0.22	+0.1
1,074,533	+	hisD	OKGIIK_04950	0.22	-1.0
1,074,534	-	hisD	OKGIIK_04950	0.22	-1.7
1,074,534	-	hisD	OKGIIK_04950	0.22	-0.9
1,074,534	-	hisD	OKGIIK_04950	0.22	+0.1
1,074,534	-	hisD	OKGIIK_04950	0.22	-0.6
1,074,534	-	hisD	OKGIIK_04950	0.22	-1.0
1,074,534	-	hisD	OKGIIK_04950	0.22	-0.9
1,074,631	+	hisD	OKGIIK_04950	0.29	+2.1
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.7
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.1
1,074,631	+	hisD	OKGIIK_04950	0.29	-4.5
1,074,631	+	hisD	OKGIIK_04950	0.29	+0.4
1,074,631	+	hisD	OKGIIK_04950	0.29	+1.1
1,074,631	+	hisD	OKGIIK_04950	0.29	+1.9
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.9
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.0
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.3
1,074,631	+	hisD	OKGIIK_04950	0.29	+0.8
1,074,631	+	hisD	OKGIIK_04950	0.29	+0.5
1,074,632	-	hisD	OKGIIK_04950	0.29	+1.1
1,074,632	-	hisD	OKGIIK_04950	0.29	+1.7
1,074,632	-	hisD	OKGIIK_04950	0.29	+0.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.0
1,074,632	-	hisD	OKGIIK_04950	0.29	+0.1
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.9
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.9
1,074,632	-	hisD	OKGIIK_04950	0.29	+0.4
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.9
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.9
1,074,766	+	hisD	OKGIIK_04950	0.39	+1.1
1,074,766	+	hisD	OKGIIK_04950	0.39	+0.3
1,074,766	+	hisD	OKGIIK_04950	0.39	-2.0
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.6
1,074,767	-	hisD	OKGIIK_04950	0.40	-1.0
1,074,767	-	hisD	OKGIIK_04950	0.40	-1.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.9
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.9
1,074,767	-	hisD	OKGIIK_04950	0.40	-1.7
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.5
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.4
1,074,838	+	hisD	OKGIIK_04950	0.45	-1.5
1,074,839	-	hisD	OKGIIK_04950	0.45	-2.0
1,074,839	-	hisD	OKGIIK_04950	0.45	-0.5
1,074,839	-	hisD	OKGIIK_04950	0.45	-0.5
1,074,839	-	hisD	OKGIIK_04950	0.45	-1.0