Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12650

Experiment: R2A_MES; pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_MES; pH5
2,723,083	+		OKGIIK_12640	0.66	-1.6
2,723,084	-		OKGIIK_12640	0.67	-2.5
2,723,084	-		OKGIIK_12640	0.67	+1.7
2,723,089	+		OKGIIK_12640	0.68	-2.3
2,723,089	+		OKGIIK_12640	0.68	-1.9
2,723,089	+		OKGIIK_12640	0.68	-0.8
2,723,089	+		OKGIIK_12640	0.68	+0.1
2,723,089	+		OKGIIK_12640	0.68	-2.6
2,723,089	+		OKGIIK_12640	0.68	+3.1
2,723,089	+		OKGIIK_12640	0.68	-2.0
2,723,089	+		OKGIIK_12640	0.68	+1.3
2,723,089	+		OKGIIK_12640	0.68	-1.3
2,723,089	+		OKGIIK_12640	0.68	-1.7
2,723,089	+		OKGIIK_12640	0.68	+1.9
2,723,089	+		OKGIIK_12640	0.68	-0.7
2,723,089	+		OKGIIK_12640	0.68	+0.7
2,723,089	+		OKGIIK_12640	0.68	-1.0
2,723,089	+		OKGIIK_12640	0.68	+1.5
2,723,089	+		OKGIIK_12640	0.68	+1.3
2,723,090	-		OKGIIK_12640	0.68	-1.3
2,723,090	-		OKGIIK_12640	0.68	+0.3
2,723,090	-		OKGIIK_12640	0.68	-2.5
2,723,090	-		OKGIIK_12640	0.68	+0.1
2,723,090	-		OKGIIK_12640	0.68	+2.3
2,723,090	-		OKGIIK_12640	0.68	+0.3
2,723,090	-		OKGIIK_12640	0.68	+0.3
2,723,090	-		OKGIIK_12640	0.68	-1.5
2,723,090	-		OKGIIK_12640	0.68	+0.0
2,723,090	-		OKGIIK_12640	0.68	-2.5
2,723,090	-		OKGIIK_12640	0.68	+0.3
2,723,319	-				-1.0
2,723,319	-				+1.3
2,723,319	-				-1.3
2,723,319	-				-2.1
2,723,530	+		OKGIIK_12645	0.32	-0.1
2,723,530	+		OKGIIK_12645	0.32	-0.3
2,723,530	+		OKGIIK_12645	0.32	-1.3
2,723,530	+		OKGIIK_12645	0.32	-1.0
2,723,530	+		OKGIIK_12645	0.32	+1.3
2,723,530	+		OKGIIK_12645	0.32	+1.7
2,723,530	+		OKGIIK_12645	0.32	-2.1
2,723,530	+		OKGIIK_12645	0.32	+1.4
2,723,531	-		OKGIIK_12645	0.33	-0.1
2,723,531	-		OKGIIK_12645	0.33	-2.1
2,723,531	-		OKGIIK_12645	0.33	+1.3
2,723,531	-		OKGIIK_12645	0.33	-0.8
2,723,531	-		OKGIIK_12645	0.33	-0.7
2,723,531	-		OKGIIK_12645	0.33	-0.3
2,723,531	-		OKGIIK_12645	0.33	-2.1
2,723,531	-		OKGIIK_12645	0.33	+0.7
2,723,531	-		OKGIIK_12645	0.33	+1.3
2,723,539	+		OKGIIK_12645	0.34	+1.3
2,723,539	+		OKGIIK_12645	0.34	-1.7
2,723,539	+		OKGIIK_12645	0.34	-0.7
2,723,539	+		OKGIIK_12645	0.34	+1.6
2,723,539	+		OKGIIK_12645	0.34	-0.5
2,723,539	+		OKGIIK_12645	0.34	-0.1
2,723,596	+		OKGIIK_12645	0.47	-1.2
2,723,596	+		OKGIIK_12645	0.47	-0.1
2,723,596	+		OKGIIK_12645	0.47	+1.1
2,723,597	-		OKGIIK_12645	0.47	-2.8
2,723,597	-		OKGIIK_12645	0.47	-1.8
2,723,597	-		OKGIIK_12645	0.47	+0.2
2,723,597	-		OKGIIK_12645	0.47	-1.3
2,723,695	+		OKGIIK_12645	0.69	-1.1
2,723,695	+		OKGIIK_12645	0.69	+1.3
2,723,695	+		OKGIIK_12645	0.69	-0.9
2,723,695	+		OKGIIK_12645	0.69	+0.7
2,723,695	+		OKGIIK_12645	0.69	+0.3
2,723,696	-		OKGIIK_12645	0.69	+1.3
2,723,696	-		OKGIIK_12645	0.69	-1.5
2,723,696	-		OKGIIK_12645	0.69	-3.7
2,723,696	-		OKGIIK_12645	0.69	-2.0
2,723,696	-		OKGIIK_12645	0.69	+1.0
2,723,696	-		OKGIIK_12645	0.69	+1.3
2,723,696	-		OKGIIK_12645	0.69	-1.1
2,723,722	+		OKGIIK_12645	0.75	-0.3
2,723,722	+		OKGIIK_12645	0.75	-2.2
2,723,722	+		OKGIIK_12645	0.75	-0.7
2,723,722	+		OKGIIK_12645	0.75	+0.5
2,723,723	-		OKGIIK_12645	0.75	+2.1
2,723,723	-		OKGIIK_12645	0.75	+1.3
2,723,723	-		OKGIIK_12645	0.75	-2.1
2,723,723	-		OKGIIK_12645	0.75	-1.7
2,723,723	-		OKGIIK_12645	0.75	-0.3
2,723,723	-		OKGIIK_12645	0.75	+0.2
2,723,723	-		OKGIIK_12645	0.75	-0.8
2,723,723	-		OKGIIK_12645	0.75	+1.3
2,723,984	+				-1.5
2,723,984	+				-1.3
2,723,984	+				+1.3
2,723,984	+				-0.7
2,723,984	+				-0.6
2,723,985	-				+1.6
2,723,985	-				-1.1
2,723,985	-				-0.3
2,723,985	-				+2.1
2,723,985	-				+1.3
2,723,985	-				-0.1
2,724,001	+				-0.3
2,724,128	+		OKGIIK_12650	0.13	+0.3
2,724,128	+		OKGIIK_12650	0.13	+1.7
2,724,128	+		OKGIIK_12650	0.13	-1.5
2,724,128	+		OKGIIK_12650	0.13	-2.1
2,724,129	-		OKGIIK_12650	0.13	-2.1
2,724,311	+		OKGIIK_12650	0.53	+0.1
2,724,311	+		OKGIIK_12650	0.53	-1.0
2,724,311	+		OKGIIK_12650	0.53	-1.8
2,724,311	+		OKGIIK_12650	0.53	-0.7
2,724,311	+		OKGIIK_12650	0.53	-0.7
2,724,311	+		OKGIIK_12650	0.53	-2.5
2,724,312	-		OKGIIK_12650	0.53	-2.3
2,724,312	-		OKGIIK_12650	0.53	-1.8
2,724,312	-		OKGIIK_12650	0.53	-1.0
2,724,312	-		OKGIIK_12650	0.53	-1.4
2,724,495	+				-1.8
2,724,495	+				-1.0
2,724,496	-				-1.8
2,724,496	-				+0.3
2,724,496	-				-0.4
2,724,567	+				-1.7
2,724,567	+				-1.7
2,724,567	+				-0.9
2,724,567	+				-0.8
2,724,567	+				-2.1
2,724,567	+				-0.3
2,724,567	+				+0.3
2,724,567	+				+2.9
2,724,567	+				-0.5
2,724,567	+				+0.2
2,724,567	+				-1.6
2,724,568	-				-1.7
2,724,568	-				+0.1
2,724,568	-				-0.6
2,724,568	-				-0.7
2,724,568	-				+1.1
2,724,568	-				+0.6
2,724,568	-				-1.3
2,724,568	-				-0.3
2,724,568	-				-0.3
2,724,568	-				-1.8
2,724,568	-				-0.5
2,724,568	-				-2.1
2,724,568	-				-1.5
2,724,583	-				-1.4
2,724,583	-				-2.9
2,725,035	-				+0.9
2,725,035	-				+0.6
2,725,035	-				-1.8
2,725,035	-				-3.5
2,725,116	+				-1.5
2,725,116	+				-2.3
2,725,116	+				+0.7
2,725,116	+				-1.8
2,725,117	-				-2.5
2,725,117	-				-1.7
2,725,117	-				+0.0
2,725,117	-				+1.1
2,725,117	-				-0.4
2,725,117	-				-2.3
2,725,117	-				-1.5
2,725,150	+				+1.3
2,725,180	+				+0.3
2,725,180	+				+3.9
2,725,180	+				-1.8
2,725,180	+				-0.7
2,725,181	-				-1.0
2,725,181	-				+1.0
2,725,181	-				-0.7
2,725,181	-				+0.2
2,725,181	-				-0.1
2,725,181	-				-0.2
2,725,181	-				+1.8
2,725,248	+		OKGIIK_12660	0.17	-2.3
2,725,248	+		OKGIIK_12660	0.17	+0.5
2,725,248	+		OKGIIK_12660	0.17	+1.3
2,725,248	+		OKGIIK_12660	0.17	-0.8
2,725,248	+		OKGIIK_12660	0.17	+0.8
2,725,248	+		OKGIIK_12660	0.17	+1.3
2,725,248	+		OKGIIK_12660	0.17	-1.4
2,725,248	+		OKGIIK_12660	0.17	-1.8
2,725,248	+		OKGIIK_12660	0.17	-1.3
2,725,248	+		OKGIIK_12660	0.17	-0.3
2,725,248	+		OKGIIK_12660	0.17	+1.1
2,725,248	+		OKGIIK_12660	0.17	-2.7
2,725,249	-		OKGIIK_12660	0.17	-1.3
2,725,249	-		OKGIIK_12660	0.17	-1.5
2,725,249	-		OKGIIK_12660	0.17	-1.5
2,725,249	-		OKGIIK_12660	0.17	+0.9
2,725,249	-		OKGIIK_12660	0.17	+0.3
2,725,249	-		OKGIIK_12660	0.17	+0.3
2,725,249	-		OKGIIK_12660	0.17	-1.7
2,725,356	+		OKGIIK_12660	0.30	-0.7
2,725,356	+		OKGIIK_12660	0.30	-0.9
2,725,356	+		OKGIIK_12660	0.30	+0.3
2,725,356	+		OKGIIK_12660	0.30	+0.5
2,725,356	+		OKGIIK_12660	0.30	-0.5
2,725,356	+		OKGIIK_12660	0.30	-0.2
2,725,356	+		OKGIIK_12660	0.30	-2.5
2,725,356	+		OKGIIK_12660	0.30	-1.0
2,725,356	+		OKGIIK_12660	0.30	-0.7
2,725,356	+		OKGIIK_12660	0.30	+2.1
2,725,356	+		OKGIIK_12660	0.30	-0.3
2,725,357	-		OKGIIK_12660	0.30	-1.7
2,725,357	-		OKGIIK_12660	0.30	-0.7
2,725,357	-		OKGIIK_12660	0.30	+1.9
2,725,357	-		OKGIIK_12660	0.30	-0.4
2,725,357	-		OKGIIK_12660	0.30	-1.5
2,725,357	-		OKGIIK_12660	0.30	-1.5
2,725,357	-		OKGIIK_12660	0.30	-1.0
2,725,357	-		OKGIIK_12660	0.30	-1.7
2,725,357	-		OKGIIK_12660	0.30	-0.1
2,725,419	+		OKGIIK_12660	0.38	-0.8
2,725,419	+		OKGIIK_12660	0.38	+0.3
2,725,419	+		OKGIIK_12660	0.38	-1.1
2,725,419	+		OKGIIK_12660	0.38	-2.6
2,725,419	+		OKGIIK_12660	0.38	-1.7
2,725,419	+		OKGIIK_12660	0.38	+0.5
2,725,419	+		OKGIIK_12660	0.38	-1.0
2,725,419	+		OKGIIK_12660	0.38	+1.3
2,725,420	-		OKGIIK_12660	0.38	+1.3
2,725,512	+		OKGIIK_12660	0.49	-1.3
2,725,512	+		OKGIIK_12660	0.49	-2.4