Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04915

Experiment: R2A_MES; pH5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_MES; pH5
1,068,364	+		OKGIIK_04905	0.13	+1.5
1,068,364	+		OKGIIK_04905	0.13	-0.5
1,068,364	+		OKGIIK_04905	0.13	-1.9
1,068,364	+		OKGIIK_04905	0.13	+1.0
1,068,364	+		OKGIIK_04905	0.13	-1.7
1,068,364	+		OKGIIK_04905	0.13	-0.3
1,068,364	+		OKGIIK_04905	0.13	-0.1
1,068,364	+		OKGIIK_04905	0.13	+2.2
1,068,365	-		OKGIIK_04905	0.13	-1.0
1,068,365	-		OKGIIK_04905	0.13	+2.2
1,068,365	-		OKGIIK_04905	0.13	-1.7
1,068,365	-		OKGIIK_04905	0.13	-0.7
1,068,365	-		OKGIIK_04905	0.13	+2.2
1,068,365	-		OKGIIK_04905	0.13	+0.7
1,068,365	-		OKGIIK_04905	0.13	-0.2
1,068,365	-		OKGIIK_04905	0.13	+1.9
1,068,365	-		OKGIIK_04905	0.13	-1.4
1,068,365	-		OKGIIK_04905	0.13	+0.2
1,068,365	-		OKGIIK_04905	0.13	-2.7
1,068,365	-		OKGIIK_04905	0.13	+1.3
1,068,365	-		OKGIIK_04905	0.13	-0.1
1,068,404	+		OKGIIK_04905	0.19	+1.7
1,068,404	+		OKGIIK_04905	0.19	-0.5
1,068,467	+		OKGIIK_04905	0.28	-2.2
1,068,467	+		OKGIIK_04905	0.28	-0.3
1,068,467	+		OKGIIK_04905	0.28	+0.4
1,068,467	+		OKGIIK_04905	0.28	+2.6
1,068,468	-		OKGIIK_04905	0.29	-0.6
1,068,468	-		OKGIIK_04905	0.29	-1.7
1,068,468	-		OKGIIK_04905	0.29	-0.5
1,068,468	-		OKGIIK_04905	0.29	-1.7
1,068,468	-		OKGIIK_04905	0.29	+0.3
1,068,468	-		OKGIIK_04905	0.29	+0.6
1,068,468	-		OKGIIK_04905	0.29	-0.0
1,068,468	-		OKGIIK_04905	0.29	+0.3
1,068,482	+		OKGIIK_04905	0.31	+1.1
1,068,483	-		OKGIIK_04905	0.31	+1.8
1,068,483	-		OKGIIK_04905	0.31	+1.3
1,068,656	+		OKGIIK_04905	0.56	+0.1
1,068,656	+		OKGIIK_04905	0.56	+1.3
1,068,656	+		OKGIIK_04905	0.56	-1.1
1,068,656	+		OKGIIK_04905	0.56	+0.9
1,068,656	+		OKGIIK_04905	0.56	-0.7
1,068,656	+		OKGIIK_04905	0.56	-2.0
1,068,656	+		OKGIIK_04905	0.56	+0.5
1,068,657	-		OKGIIK_04905	0.56	+0.3
1,068,657	-		OKGIIK_04905	0.56	+1.3
1,068,657	-		OKGIIK_04905	0.56	+0.3
1,068,657	-		OKGIIK_04905	0.56	+1.0
1,068,657	-		OKGIIK_04905	0.56	-1.5
1,068,660	-		OKGIIK_04905	0.57	-1.3
1,069,026	+				-1.7
1,069,031	+				-0.7
1,069,031	+				-0.5
1,069,032	-				-1.2
1,069,032	-				-1.5
1,069,336	+				-0.5
1,069,336	+				-0.2
1,069,336	+				-1.9
1,069,336	+				+0.6
1,069,336	+				-2.9
1,069,336	+				+1.0
1,069,336	+				-1.0
1,069,336	+				+1.7
1,069,336	+				+1.7
1,069,336	+				-2.0
1,069,336	+				-0.3
1,069,336	+				+0.3
1,069,336	+				-2.8
1,069,336	+				-2.5
1,069,336	+				+0.3
1,069,336	+				-2.7
1,069,336	+				-0.7
1,069,336	+				-0.7
1,069,336	+				-1.4
1,069,336	+				-1.0
1,069,336	+				+1.0
1,069,336	+				+0.7
1,069,336	+				-0.7
1,069,336	+				-0.7
1,069,336	+				-0.9
1,069,336	+				-0.5
1,069,336	+				-1.7
1,069,336	+				+0.7
1,069,337	-				-0.8
1,069,337	-				-0.5
1,069,337	-				+0.3
1,069,337	-				-2.6
1,069,337	-				-1.5
1,069,337	-				-1.0
1,069,337	-				-0.3
1,069,337	-				-0.3
1,069,337	-				-1.3
1,069,337	-				-1.3
1,069,337	-				-2.2
1,069,337	-				+0.3
1,069,337	-				-1.3
1,069,337	-				-0.7
1,069,337	-				-2.0
1,069,337	-				+0.8
1,069,337	-				+1.0
1,069,337	-				-0.9
1,069,337	-				-1.4
1,069,337	-				-0.1
1,069,337	-				-1.4
1,069,337	-				-2.0
1,069,337	-				-0.1
1,069,337	-				+0.3
1,069,337	-				+0.5
1,069,337	-				-0.0
1,069,337	-				-1.7
1,069,337	-				-0.6
1,069,337	-				-3.8
1,069,337	-				-3.2
1,069,337	-				-1.7
1,069,337	-				-1.3
1,069,337	-				-1.0
1,069,337	-				-0.3
1,069,337	-				-2.3
1,069,337	-				-2.7
1,069,337	-				-2.8
1,069,337	-				-1.7
1,069,337	-				-0.7
1,069,337	-				-1.9
1,069,337	-				-1.0
1,069,337	-				-1.2
1,069,337	-				-2.3
1,069,535	+		OKGIIK_04915	0.39	-1.7
1,069,535	+		OKGIIK_04915	0.39	-1.5
1,069,535	+		OKGIIK_04915	0.39	+1.3
1,069,535	+		OKGIIK_04915	0.39	-1.7
1,069,536	-		OKGIIK_04915	0.39	+1.3
1,069,536	-		OKGIIK_04915	0.39	-3.9
1,069,536	-		OKGIIK_04915	0.39	-1.5
1,069,536	-		OKGIIK_04915	0.39	-1.5
1,069,536	-		OKGIIK_04915	0.39	-4.5
1,069,592	+		OKGIIK_04915	0.50	-1.5
1,069,592	+		OKGIIK_04915	0.50	-2.2
1,069,592	+		OKGIIK_04915	0.50	-3.2
1,069,592	+		OKGIIK_04915	0.50	-1.7
1,069,593	-		OKGIIK_04915	0.50	-0.3
1,069,593	-		OKGIIK_04915	0.50	-2.0
1,069,883	+				-0.9
1,069,883	+				-1.7
1,069,885	+				-0.9
1,069,885	+				-0.6
1,069,886	-				-0.5
1,069,886	-				-2.7
1,069,890	+				-2.2
1,069,891	-				-0.7
1,069,909	+				-0.9
1,069,909	+				-1.0
1,069,999	+		OKGIIK_04920	0.12	-0.7
1,069,999	+		OKGIIK_04920	0.12	-0.3
1,069,999	+		OKGIIK_04920	0.12	-2.3
1,070,238	+		OKGIIK_04920	0.67	+0.5
1,070,238	+		OKGIIK_04920	0.67	-0.2
1,070,238	+		OKGIIK_04920	0.67	-2.0
1,070,238	+		OKGIIK_04920	0.67	-1.2
1,070,238	+		OKGIIK_04920	0.67	-1.0
1,070,238	+		OKGIIK_04920	0.67	-0.1
1,070,238	+		OKGIIK_04920	0.67	+0.6
1,070,238	+		OKGIIK_04920	0.67	-0.6
1,070,238	+		OKGIIK_04920	0.67	+1.5
1,070,239	-		OKGIIK_04920	0.67	-0.7
1,070,239	-		OKGIIK_04920	0.67	+1.3
1,070,239	-		OKGIIK_04920	0.67	-1.2
1,070,239	-		OKGIIK_04920	0.67	-1.7
1,070,239	-		OKGIIK_04920	0.67	-2.2
1,070,251	-		OKGIIK_04920	0.70	-2.5
1,070,251	-		OKGIIK_04920	0.70	+0.3
1,070,340	+				-2.5
1,070,340	+				-0.1
1,070,340	+				-0.7
1,070,340	+				-1.0
1,070,340	+				+1.3
1,070,340	+				-0.6
1,070,340	+				-2.2
1,070,340	+				-0.3
1,070,340	+				-0.6
1,070,340	+				-1.5
1,070,341	-				+0.3
1,070,409	+				-0.7
1,070,409	+				-2.6
1,070,428	+				-0.2
1,070,428	+				-0.1
1,070,428	+				+2.9
1,070,428	+				-2.4
1,070,428	+				-1.0
1,070,428	+				-0.9
1,070,428	+				-1.3
1,070,428	+				-1.7
1,070,428	+				-3.4
1,070,428	+				+2.3
1,070,428	+				+1.3
1,070,428	+				-0.7
1,070,428	+				-0.2
1,070,428	+				-2.2
1,070,429	-				+0.4
1,070,429	-				-0.7
1,070,429	-				-2.5
1,070,429	-				-1.3
1,070,429	-				-1.7
1,070,429	-				+1.3
1,070,429	-				-1.7
1,070,429	-				-0.7
1,070,429	-				+1.3
1,070,429	-				-0.9
1,070,701	+		OKGIIK_04925	0.28	+0.8
1,070,701	+		OKGIIK_04925	0.28	-1.0
1,070,701	+		OKGIIK_04925	0.28	+0.3
1,070,701	+		OKGIIK_04925	0.28	+0.3
1,070,701	+		OKGIIK_04925	0.28	-0.3
1,070,701	+		OKGIIK_04925	0.28	+0.3
1,070,701	+		OKGIIK_04925	0.28	+1.6
1,070,701	+		OKGIIK_04925	0.28	-3.6
1,070,701	+		OKGIIK_04925	0.28	-0.9
1,070,701	+		OKGIIK_04925	0.28	+0.3
1,070,701	+		OKGIIK_04925	0.28	-0.7
1,070,701	+		OKGIIK_04925	0.28	-0.5
1,070,701	+		OKGIIK_04925	0.28	-0.1
1,070,701	+		OKGIIK_04925	0.28	+0.1
1,070,701	+		OKGIIK_04925	0.28	-2.2
1,070,701	+		OKGIIK_04925	0.28	-2.0
1,070,701	+		OKGIIK_04925	0.28	+1.3
1,070,701	+		OKGIIK_04925	0.28	-1.2
1,070,701	+		OKGIIK_04925	0.28	-1.3
1,070,701	+		OKGIIK_04925	0.28	-1.0
1,070,701	+		OKGIIK_04925	0.28	+0.2
1,070,701	+		OKGIIK_04925	0.28	+0.1
1,070,701	+		OKGIIK_04925	0.28	-1.5
1,070,701	+		OKGIIK_04925	0.28	+1.3
1,070,701	+		OKGIIK_04925	0.28	-0.1
1,070,701	+		OKGIIK_04925	0.28	+0.6
1,070,701	+		OKGIIK_04925	0.28	-1.0
1,070,701	+		OKGIIK_04925	0.28	-1.5
1,070,702	-		OKGIIK_04925	0.28	-1.7
1,070,702	-		OKGIIK_04925	0.28	-0.7
1,070,702	-		OKGIIK_04925	0.28	-1.5
1,070,702	-		OKGIIK_04925	0.28	+3.1
1,070,702	-		OKGIIK_04925	0.28	+1.3
1,070,702	-		OKGIIK_04925	0.28	-1.3
1,070,702	-		OKGIIK_04925	0.28	-2.3
1,070,702	-		OKGIIK_04925	0.28	-0.3
1,070,702	-		OKGIIK_04925	0.28	-1.5
1,070,702	-		OKGIIK_04925	0.28	-1.0
1,070,702	-		OKGIIK_04925	0.28	-0.0
1,070,702	-		OKGIIK_04925	0.28	-0.7
1,070,702	-		OKGIIK_04925	0.28	-0.7
1,070,702	-		OKGIIK_04925	0.28	-1.5
1,070,702	-		OKGIIK_04925	0.28	+1.3
1,070,702	-		OKGIIK_04925	0.28	+0.3
1,070,702	-		OKGIIK_04925	0.28	-2.2
1,070,702	-		OKGIIK_04925	0.28	+0.1
1,070,702	-		OKGIIK_04925	0.28	-1.0
1,070,702	-		OKGIIK_04925	0.28	-0.3
1,070,702	-		OKGIIK_04925	0.28	-1.0
1,070,702	-		OKGIIK_04925	0.28	-1.0
1,070,702	-		OKGIIK_04925	0.28	+0.7
1,070,702	-		OKGIIK_04925	0.28	-2.0
1,070,707	+		OKGIIK_04925	0.28	-1.5
1,070,707	+		OKGIIK_04925	0.28	-1.5
1,070,707	+		OKGIIK_04925	0.28	+1.5
1,070,708	-		OKGIIK_04925	0.28	+0.4
1,070,779	+		OKGIIK_04925	0.36	+0.3
1,070,779	+		OKGIIK_04925	0.36	-1.0
1,070,779	+		OKGIIK_04925	0.36	+0.9
1,070,780	-		OKGIIK_04925	0.36	-2.6
1,070,780	-		OKGIIK_04925	0.36	-1.5
1,070,780	-		OKGIIK_04925	0.36	-1.5
1,070,780	-		OKGIIK_04925	0.36	-0.9