Experiment: R2A_MES; pH5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03035 and OKGIIK_03040 are separated by 115 nucleotides OKGIIK_03040 and purE are separated by 133 nucleotides purE and purK overlap by 4 nucleotides
OKGIIK_03035: OKGIIK_03035 - hypothetical protein, at 688,631 to 691,780
_03035
OKGIIK_03040: OKGIIK_03040 - hypothetical protein, at 691,896 to 692,165
_03040
OKGIIK_03045: purE - Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase, at 692,299 to 692,736
purE
OKGIIK_03050: purK - 5-(carboxyamino)imidazole ribonucleotide synthase, at 692,733 to 693,923
purK
Position (kb) 691
692
693 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.140 kb on + strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.141 kb on - strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.167 kb on + strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.168 kb on - strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.185 kb on + strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.186 kb on - strand, within OKGIIK_03035 at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.572 kb on + strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.573 kb on - strand at 691.837 kb on + strand at 691.837 kb on + strand at 691.838 kb on - strand at 691.838 kb on - strand at 691.846 kb on + strand at 691.847 kb on - strand at 691.847 kb on - strand at 691.860 kb on + strand at 691.860 kb on + strand at 691.860 kb on + strand at 691.861 kb on - strand at 691.861 kb on - strand at 691.861 kb on - strand at 691.861 kb on - strand at 691.897 kb on + strand at 691.897 kb on + strand at 691.897 kb on + strand at 691.897 kb on + strand at 691.898 kb on - strand at 691.898 kb on - strand at 691.898 kb on - strand at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.978 kb on + strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 691.979 kb on - strand, within OKGIIK_03040 at 692.068 kb on - strand, within OKGIIK_03040 at 692.204 kb on + strand at 692.204 kb on + strand at 692.204 kb on + strand at 692.204 kb on + strand at 692.205 kb on - strand at 692.205 kb on - strand at 692.205 kb on - strand at 692.209 kb on + strand at 692.755 kb on + strand at 692.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_MES; pH5 remove 691,140 + OKGIIK_03035 0.80 -0.8 691,140 + OKGIIK_03035 0.80 +0.1 691,140 + OKGIIK_03035 0.80 -0.8 691,140 + OKGIIK_03035 0.80 -0.3 691,140 + OKGIIK_03035 0.80 +1.2 691,140 + OKGIIK_03035 0.80 -1.6 691,140 + OKGIIK_03035 0.80 -1.1 691,141 - OKGIIK_03035 0.80 +2.2 691,141 - OKGIIK_03035 0.80 +0.5 691,141 - OKGIIK_03035 0.80 +2.2 691,141 - OKGIIK_03035 0.80 +0.7 691,141 - OKGIIK_03035 0.80 -1.2 691,167 + OKGIIK_03035 0.81 -1.3 691,167 + OKGIIK_03035 0.81 +0.5 691,167 + OKGIIK_03035 0.81 -1.3 691,167 + OKGIIK_03035 0.81 -2.5 691,167 + OKGIIK_03035 0.81 -2.3 691,167 + OKGIIK_03035 0.81 -1.8 691,168 - OKGIIK_03035 0.81 +0.4 691,168 - OKGIIK_03035 0.81 -1.8 691,168 - OKGIIK_03035 0.81 +1.2 691,168 - OKGIIK_03035 0.81 -0.3 691,168 - OKGIIK_03035 0.81 -1.9 691,168 - OKGIIK_03035 0.81 -2.1 691,168 - OKGIIK_03035 0.81 +0.2 691,168 - OKGIIK_03035 0.81 -0.8 691,168 - OKGIIK_03035 0.81 -0.8 691,168 - OKGIIK_03035 0.81 +2.2 691,168 - OKGIIK_03035 0.81 -0.8 691,185 + OKGIIK_03035 0.81 -2.9 691,185 + OKGIIK_03035 0.81 -2.9 691,185 + OKGIIK_03035 0.81 -1.3 691,185 + OKGIIK_03035 0.81 -0.8 691,185 + OKGIIK_03035 0.81 -0.0 691,185 + OKGIIK_03035 0.81 -0.8 691,185 + OKGIIK_03035 0.81 -1.9 691,185 + OKGIIK_03035 0.81 -1.8 691,185 + OKGIIK_03035 0.81 -0.3 691,185 + OKGIIK_03035 0.81 -2.8 691,185 + OKGIIK_03035 0.81 -2.5 691,185 + OKGIIK_03035 0.81 -1.8 691,185 + OKGIIK_03035 0.81 +1.2 691,185 + OKGIIK_03035 0.81 -2.3 691,185 + OKGIIK_03035 0.81 -1.1 691,185 + OKGIIK_03035 0.81 -0.2 691,186 - OKGIIK_03035 0.81 -0.9 691,186 - OKGIIK_03035 0.81 -0.2 691,186 - OKGIIK_03035 0.81 -1.3 691,186 - OKGIIK_03035 0.81 +0.3 691,186 - OKGIIK_03035 0.81 +0.2 691,186 - OKGIIK_03035 0.81 +1.2 691,186 - OKGIIK_03035 0.81 -2.2 691,186 - OKGIIK_03035 0.81 -2.3 691,186 - OKGIIK_03035 0.81 +0.7 691,186 - OKGIIK_03035 0.81 -2.1 691,186 - OKGIIK_03035 0.81 -0.3 691,186 - OKGIIK_03035 0.81 -1.3 691,186 - OKGIIK_03035 0.81 -0.8 691,186 - OKGIIK_03035 0.81 -1.3 691,186 - OKGIIK_03035 0.81 -1.6 691,186 - OKGIIK_03035 0.81 +2.2 691,186 - OKGIIK_03035 0.81 +0.8 691,186 - OKGIIK_03035 0.81 -1.9 691,186 - OKGIIK_03035 0.81 -2.6 691,186 - OKGIIK_03035 0.81 +1.2 691,186 - OKGIIK_03035 0.81 -2.1 691,186 - OKGIIK_03035 0.81 -3.7 691,186 - OKGIIK_03035 0.81 -0.8 691,186 - OKGIIK_03035 0.81 -2.1 691,186 - OKGIIK_03035 0.81 +0.4 691,186 - OKGIIK_03035 0.81 +0.2 691,186 - OKGIIK_03035 0.81 -0.9 691,572 + +1.2 691,572 + -1.8 691,572 + -0.3 691,572 + +0.2 691,572 + -1.3 691,572 + +0.2 691,572 + -0.8 691,572 + -0.8 691,572 + -0.3 691,572 + -0.3 691,572 + -1.1 691,572 + -1.6 691,573 - -2.6 691,573 - -0.3 691,573 - -1.1 691,573 - -1.1 691,573 - -1.2 691,573 - +1.4 691,573 - -0.8 691,573 - -1.3 691,573 - -1.1 691,573 - -1.3 691,573 - -0.4 691,573 - -1.6 691,573 - -1.1 691,573 - -1.6 691,573 - -1.6 691,573 - -2.8 691,573 - -1.8 691,573 - +0.4 691,573 - -0.8 691,573 - +0.7 691,573 - -3.1 691,573 - -0.8 691,573 - -2.9 691,837 + -2.1 691,837 + -0.8 691,838 - -0.3 691,838 - -1.9 691,846 + -0.5 691,847 - -0.0 691,847 - +0.2 691,860 + -1.9 691,860 + +2.2 691,860 + -1.3 691,861 - -2.2 691,861 - -0.3 691,861 - -0.8 691,861 - -0.5 691,897 + +0.9 691,897 + -1.6 691,897 + +1.2 691,897 + -1.5 691,898 - +1.2 691,898 - -2.2 691,898 - +1.2 691,978 + OKGIIK_03040 0.30 -0.8 691,978 + OKGIIK_03040 0.30 +0.2 691,978 + OKGIIK_03040 0.30 -2.3 691,978 + OKGIIK_03040 0.30 -2.1 691,978 + OKGIIK_03040 0.30 -0.3 691,979 - OKGIIK_03040 0.31 +0.2 691,979 - OKGIIK_03040 0.31 -2.1 691,979 - OKGIIK_03040 0.31 -2.2 691,979 - OKGIIK_03040 0.31 -1.8 691,979 - OKGIIK_03040 0.31 -2.4 691,979 - OKGIIK_03040 0.31 -0.8 691,979 - OKGIIK_03040 0.31 -2.1 692,068 - OKGIIK_03040 0.64 -1.1 692,204 + -0.6 692,204 + +0.2 692,204 + -0.3 692,204 + -1.2 692,205 - -1.7 692,205 - +0.2 692,205 - -1.3 692,209 + -1.6 692,755 + -3.4 692,755 + -1.4
Or see this region's nucleotide sequence