Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07250

Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
1,602,691	+				-2.2
1,602,691	+				+0.5
1,602,691	+				+0.7
1,602,691	+				+1.1
1,602,691	+				-2.6
1,602,691	+				-1.9
1,602,691	+				-2.4
1,602,692	-				-2.5
1,602,692	-				-2.4
1,602,692	-				-1.1
1,602,692	-				-1.7
1,602,699	+				-0.5
1,602,700	-				-1.2
1,602,700	-				+0.1
1,602,704	+				-3.6
1,602,704	+				-1.2
1,602,704	+				-2.6
1,602,704	+				-2.8
1,602,704	+				-3.0
1,602,704	+				-2.5
1,602,705	-				-2.1
1,602,705	-				-1.9
1,602,705	-				-2.6
1,602,705	-				+1.1
1,602,781	+		OKGIIK_07245	0.17	+1.1
1,602,781	+		OKGIIK_07245	0.17	-1.6
1,602,781	+		OKGIIK_07245	0.17	-0.5
1,602,781	+		OKGIIK_07245	0.17	-0.2
1,602,781	+		OKGIIK_07245	0.17	-0.9
1,602,781	+		OKGIIK_07245	0.17	-0.9
1,602,781	+		OKGIIK_07245	0.17	-4.1
1,602,782	-		OKGIIK_07245	0.17	-1.9
1,602,782	-		OKGIIK_07245	0.17	-1.9
1,602,782	-		OKGIIK_07245	0.17	-2.4
1,602,782	-		OKGIIK_07245	0.17	-0.9
1,602,782	-		OKGIIK_07245	0.17	-2.2
1,602,832	+		OKGIIK_07245	0.22	+1.1
1,602,832	+		OKGIIK_07245	0.22	-2.8
1,602,832	+		OKGIIK_07245	0.22	+1.8
1,602,832	+		OKGIIK_07245	0.22	-3.0
1,602,832	+		OKGIIK_07245	0.22	-3.2
1,602,832	+		OKGIIK_07245	0.22	+0.1
1,602,832	+		OKGIIK_07245	0.22	-3.0
1,602,832	+		OKGIIK_07245	0.22	-0.4
1,602,833	-		OKGIIK_07245	0.22	-0.5
1,602,833	-		OKGIIK_07245	0.22	-0.9
1,602,833	-		OKGIIK_07245	0.22	-2.1
1,602,833	-		OKGIIK_07245	0.22	-1.7
1,602,833	-		OKGIIK_07245	0.22	-2.5
1,602,833	-		OKGIIK_07245	0.22	-1.2
1,602,833	-		OKGIIK_07245	0.22	-0.5
1,602,856	+		OKGIIK_07245	0.24	-2.1
1,602,856	+		OKGIIK_07245	0.24	-1.2
1,602,856	+		OKGIIK_07245	0.24	-3.7
1,602,856	+		OKGIIK_07245	0.24	-2.5
1,602,857	-		OKGIIK_07245	0.25	-2.1
1,602,857	-		OKGIIK_07245	0.25	-1.9
1,602,857	-		OKGIIK_07245	0.25	-3.3
1,602,857	-		OKGIIK_07245	0.25	-2.1
1,602,857	-		OKGIIK_07245	0.25	-3.0
1,603,555	+				-2.6
1,603,556	-				-1.7
1,603,573	-				-0.9
1,603,624	+				-1.1
1,603,624	+				-2.5
1,603,624	+				-1.7
1,603,624	+				-2.5
1,603,624	+				-3.2
1,603,624	+				-1.7
1,603,624	+				-2.1
1,603,624	+				-1.9
1,603,624	+				-0.5
1,603,624	+				-1.5
1,603,624	+				-0.2
1,603,624	+				-0.9
1,603,624	+				-1.9
1,603,624	+				-1.2
1,603,624	+				+0.4
1,603,624	+				+0.1
1,603,624	+				-0.9
1,603,624	+				-2.4
1,603,624	+				-0.5
1,603,624	+				+0.1
1,603,624	+				-1.2
1,603,624	+				-2.2
1,603,624	+				+0.1
1,603,624	+				+3.4
1,603,624	+				-2.6
1,603,624	+				-1.9
1,603,624	+				+1.2
1,603,624	+				-0.9
1,603,624	+				-0.9
1,603,624	+				+0.1
1,603,624	+				-1.0
1,603,624	+				-2.2
1,603,624	+				+1.1
1,603,625	-				+0.1
1,603,625	-				-1.7
1,603,625	-				-2.4
1,603,625	-				-0.5
1,603,625	-				-3.1
1,603,625	-				+1.1
1,603,625	-				+3.1
1,603,625	-				-2.1
1,603,625	-				-2.4
1,603,625	-				-0.5
1,603,625	-				-0.5
1,603,625	-				+1.1
1,603,625	-				-1.3
1,603,625	-				-1.9
1,603,625	-				-2.1
1,603,625	-				-0.9
1,603,625	-				-0.3
1,603,625	-				-0.9
1,603,625	-				-1.3
1,603,625	-				+1.1
1,603,625	-				+1.1
1,603,625	-				-0.7
1,603,625	-				-3.0
1,603,625	-				-1.7
1,603,625	-				-0.7
1,603,625	-				+0.3
1,603,625	-				-0.2
1,603,625	-				-0.9
1,603,625	-				-1.8
1,603,625	-				-0.9
1,603,742	+				-0.5
1,603,742	+				+0.1
1,603,742	+				-0.4
1,603,742	+				-2.2
1,603,743	-				-1.8
1,603,743	-				-0.6
1,603,743	-				-1.5
1,603,743	-				+0.8
1,603,743	-				-1.5
1,603,743	-				-0.5
1,603,743	-				-0.4
1,603,929	-	lapB	OKGIIK_07250	0.25	-0.9
1,604,027	+	lapB	OKGIIK_07250	0.33	-2.4
1,604,027	+	lapB	OKGIIK_07250	0.33	-1.5
1,604,027	+	lapB	OKGIIK_07250	0.33	-2.6
1,604,027	+	lapB	OKGIIK_07250	0.33	-3.2
1,604,027	+	lapB	OKGIIK_07250	0.33	-0.9
1,604,028	-	lapB	OKGIIK_07250	0.33	-2.2
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.9
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.9
1,604,028	-	lapB	OKGIIK_07250	0.33	+1.5
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.2
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.9
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.6
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.5
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.2
1,604,028	-	lapB	OKGIIK_07250	0.33	-2.5
1,604,028	-	lapB	OKGIIK_07250	0.33	-1.1
1,604,094	-	lapB	OKGIIK_07250	0.39	-1.6
1,604,094	-	lapB	OKGIIK_07250	0.39	-2.2
1,604,161	+	lapB	OKGIIK_07250	0.45	-2.2
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.5
1,604,161	+	lapB	OKGIIK_07250	0.45	-0.9
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.5
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.5
1,604,161	+	lapB	OKGIIK_07250	0.45	+0.1
1,604,161	+	lapB	OKGIIK_07250	0.45	-1.5
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.1
1,604,162	-	lapB	OKGIIK_07250	0.45	+2.7
1,604,162	-	lapB	OKGIIK_07250	0.45	+1.1
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.7
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.6
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.5
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.1
1,604,162	-	lapB	OKGIIK_07250	0.45	-0.5
1,604,162	-	lapB	OKGIIK_07250	0.45	-2.1
1,604,198	+	lapB	OKGIIK_07250	0.48	+1.1
1,604,198	+	lapB	OKGIIK_07250	0.48	-2.6
1,604,198	+	lapB	OKGIIK_07250	0.48	-1.9
1,604,199	-	lapB	OKGIIK_07250	0.48	-3.3
1,604,255	+	lapB	OKGIIK_07250	0.53	-2.1
1,604,255	+	lapB	OKGIIK_07250	0.53	-0.7
1,604,255	+	lapB	OKGIIK_07250	0.53	-2.1
1,604,255	+	lapB	OKGIIK_07250	0.53	-1.7
1,604,255	+	lapB	OKGIIK_07250	0.53	-2.1
1,604,255	+	lapB	OKGIIK_07250	0.53	+1.1
1,604,256	-	lapB	OKGIIK_07250	0.53	-0.9
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.0
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.7
1,604,256	-	lapB	OKGIIK_07250	0.53	+1.1
1,604,256	-	lapB	OKGIIK_07250	0.53	-2.2
1,604,256	-	lapB	OKGIIK_07250	0.53	-1.2
1,604,351	+	lapB	OKGIIK_07250	0.61	-2.8
1,604,351	+	lapB	OKGIIK_07250	0.61	-2.9
1,604,352	-	lapB	OKGIIK_07250	0.61	-2.2
1,604,352	-	lapB	OKGIIK_07250	0.61	-1.4
1,604,352	-	lapB	OKGIIK_07250	0.61	-0.9
1,604,352	-	lapB	OKGIIK_07250	0.61	-2.0
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.1
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.2
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.4
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.5
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.1
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.7
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.9
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.5
1,604,453	+	lapB	OKGIIK_07250	0.70	-1.2
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.5
1,604,453	+	lapB	OKGIIK_07250	0.70	-2.4
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-2.4
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.2
1,604,454	-	lapB	OKGIIK_07250	0.70	+0.1
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.9
1,604,454	-	lapB	OKGIIK_07250	0.70	-2.2
1,604,454	-	lapB	OKGIIK_07250	0.70	-2.2
1,604,454	-	lapB	OKGIIK_07250	0.70	+0.9
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.5
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-2.6
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.9
1,604,454	-	lapB	OKGIIK_07250	0.70	-2.5
1,604,612	+	lapB	OKGIIK_07250	0.83	+1.1
1,604,612	+	lapB	OKGIIK_07250	0.83	-0.2
1,604,612	+	lapB	OKGIIK_07250	0.83	+2.1
1,604,612	+	lapB	OKGIIK_07250	0.83	-1.0
1,604,613	-	lapB	OKGIIK_07250	0.83	+1.1
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.2
1,604,613	-	lapB	OKGIIK_07250	0.83	-0.9
1,604,613	-	lapB	OKGIIK_07250	0.83	-0.5
1,604,669	+	lapB	OKGIIK_07250	0.88	-0.5
1,604,669	+	lapB	OKGIIK_07250	0.88	-1.9
1,604,669	+	lapB	OKGIIK_07250	0.88	+1.1
1,604,669	+	lapB	OKGIIK_07250	0.88	+1.1
1,604,669	+	lapB	OKGIIK_07250	0.88	-0.5
1,604,669	+	lapB	OKGIIK_07250	0.88	-2.5
1,604,669	+	lapB	OKGIIK_07250	0.88	-0.5
1,604,670	-	lapB	OKGIIK_07250	0.88	+1.1
1,604,670	-	lapB	OKGIIK_07250	0.88	-0.5
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.2
1,604,670	-	lapB	OKGIIK_07250	0.88	-3.4
1,604,670	-	lapB	OKGIIK_07250	0.88	-2.2
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.5
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.7
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.9
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.0
1,604,670	-	lapB	OKGIIK_07250	0.88	-1.5
1,604,687	+	lapB	OKGIIK_07250	0.90	-2.1
1,604,687	+	lapB	OKGIIK_07250	0.90	-2.1
1,604,688	-	lapB	OKGIIK_07250	0.90	-1.0
1,604,688	-	lapB	OKGIIK_07250	0.90	-2.6
1,604,688	-	lapB	OKGIIK_07250	0.90	-0.1
1,604,688	-	lapB	OKGIIK_07250	0.90	-2.1
1,604,795	+				-0.5
1,604,795	+				-0.4
1,604,795	+				-0.5
1,604,795	+				-1.5
1,604,795	+				-3.2
1,604,795	+				-1.5
1,604,795	+				-1.9
1,604,795	+				-3.5
1,604,795	+				-1.5
1,604,795	+				+1.1
1,604,795	+				-2.2
1,604,795	+				-2.2
1,604,795	+				+0.1
1,604,795	+				-2.6
1,604,795	+				-1.9
1,604,796	-				-2.4
1,604,796	-				-1.7
1,604,796	-				-2.6
1,604,796	-				-0.9
1,604,796	-				-1.7
1,604,796	-				-0.5
1,604,796	-				-2.7
1,604,796	-				+1.1
1,604,796	-				+0.5
1,604,796	-				-2.7
1,604,796	-				-0.5
1,604,796	-				-0.5
1,604,796	-				-2.1
1,604,796	-				-1.6
1,604,796	-				-0.2
1,604,796	-				-1.4
1,604,796	-				+1.1
1,604,796	-				-0.5
1,604,796	-				+0.7
1,604,796	-				-0.3
1,604,796	-				-1.7
1,604,796	-				-2.1
1,604,888	+		OKGIIK_07255	0.33	-1.9
1,604,974	+		OKGIIK_07255	0.66	-2.2
1,604,974	+		OKGIIK_07255	0.66	-2.1
1,604,974	+		OKGIIK_07255	0.66	-1.5
1,604,974	+		OKGIIK_07255	0.66	-0.8
1,604,975	-		OKGIIK_07255	0.67	-2.5
1,604,975	-		OKGIIK_07255	0.67	-2.2
1,604,975	-		OKGIIK_07255	0.67	-1.5
1,604,975	-		OKGIIK_07255	0.67	+0.1
1,604,975	-		OKGIIK_07255	0.67	-0.9
1,604,975	-		OKGIIK_07255	0.67	-0.9
1,605,070	+				-1.5
1,605,071	-				-1.5
1,605,071	-				+1.0