Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_06425 and scpB overlap by 4 nucleotides scpB and scpA overlap by 4 nucleotides scpA and OKGIIK_06440 are separated by 889 nucleotides
OKGIIK_06425: OKGIIK_06425 - Pseudouridine synthase, at 1,413,374 to 1,414,912
_06425
OKGIIK_06430: scpB - SMC-Scp complex subunit ScpB, at 1,414,909 to 1,415,724
scpB
OKGIIK_06435: scpA - Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family, at 1,415,721 to 1,416,653
scpA
OKGIIK_06440: OKGIIK_06440 - Pilus assembly protein PilZ, at 1,417,543 to 1,417,914
_06440
Position (kb)
1415
1416
1417 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1414.920 kb on - strand at 1415.241 kb on - strand, within scpB at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.824 kb on - strand, within scpA at 1416.389 kb on - strand, within scpA at 1416.389 kb on - strand, within scpA at 1416.613 kb on - strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.657 kb on + strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.658 kb on - strand at 1416.781 kb on + strand at 1416.782 kb on - strand at 1416.782 kb on - strand at 1417.058 kb on + strand at 1417.059 kb on - strand at 1417.059 kb on - strand at 1417.059 kb on - strand at 1417.059 kb on - strand at 1417.155 kb on + strand at 1417.155 kb on + strand at 1417.155 kb on + strand at 1417.156 kb on - strand at 1417.156 kb on - strand at 1417.156 kb on - strand at 1417.156 kb on - strand at 1417.156 kb on - strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.379 kb on + strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.380 kb on - strand at 1417.382 kb on + strand at 1417.382 kb on + strand at 1417.383 kb on - strand at 1417.383 kb on - strand at 1417.383 kb on - strand at 1417.400 kb on + strand at 1417.400 kb on + strand at 1417.515 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 1,414,920 - -0.8 1,415,241 - scpB OKGIIK_06430 0.41 -1.6 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,822 - scpA OKGIIK_06435 0.11 -0.7 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,822 - scpA OKGIIK_06435 0.11 -1.6 1,415,822 - scpA OKGIIK_06435 0.11 +1.8 1,415,822 - scpA OKGIIK_06435 0.11 -2.0 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,822 - scpA OKGIIK_06435 0.11 -2.2 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,822 - scpA OKGIIK_06435 0.11 -1.8 1,415,822 - scpA OKGIIK_06435 0.11 +0.2 1,415,822 - scpA OKGIIK_06435 0.11 -0.8 1,415,822 - scpA OKGIIK_06435 0.11 +1.2 1,415,822 - scpA OKGIIK_06435 0.11 -1.8 1,415,822 - scpA OKGIIK_06435 0.11 -1.0 1,415,822 - scpA OKGIIK_06435 0.11 -1.8 1,415,822 - scpA OKGIIK_06435 0.11 +1.2 1,415,822 - scpA OKGIIK_06435 0.11 -0.6 1,415,822 - scpA OKGIIK_06435 0.11 +0.2 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,822 - scpA OKGIIK_06435 0.11 -0.7 1,415,822 - scpA OKGIIK_06435 0.11 +1.2 1,415,822 - scpA OKGIIK_06435 0.11 +1.8 1,415,822 - scpA OKGIIK_06435 0.11 +1.2 1,415,822 - scpA OKGIIK_06435 0.11 +1.2 1,415,822 - scpA OKGIIK_06435 0.11 -2.7 1,415,822 - scpA OKGIIK_06435 0.11 -0.8 1,415,822 - scpA OKGIIK_06435 0.11 -1.6 1,415,822 - scpA OKGIIK_06435 0.11 -1.2 1,415,824 - scpA OKGIIK_06435 0.11 +0.2 1,416,389 - scpA OKGIIK_06435 0.72 -1.2 1,416,389 - scpA OKGIIK_06435 0.72 -2.7 1,416,613 - +1.2 1,416,657 + -1.0 1,416,657 + -1.1 1,416,657 + -1.8 1,416,657 + -0.2 1,416,657 + -0.5 1,416,657 + -1.4 1,416,657 + -1.2 1,416,657 + -0.0 1,416,657 + +0.2 1,416,657 + -1.7 1,416,657 + -1.4 1,416,657 + -0.3 1,416,657 + -1.8 1,416,657 + -1.2 1,416,657 + -0.4 1,416,657 + -2.5 1,416,657 + -1.3 1,416,658 - -1.4 1,416,658 - -1.8 1,416,658 - +0.8 1,416,658 - +0.8 1,416,658 - -2.8 1,416,658 - -1.2 1,416,658 - +1.2 1,416,658 - -2.0 1,416,658 - -2.4 1,416,658 - +1.2 1,416,658 - -1.4 1,416,658 - +2.2 1,416,658 - -0.2 1,416,658 - -0.0 1,416,658 - -2.4 1,416,658 - +1.6 1,416,658 - -2.3 1,416,658 - +1.4 1,416,658 - +4.2 1,416,658 - -2.6 1,416,658 - -0.8 1,416,658 - -0.5 1,416,658 - -0.6 1,416,658 - +2.8 1,416,658 - +0.4 1,416,658 - -0.6 1,416,658 - -0.2 1,416,658 - +1.2 1,416,658 - +0.7 1,416,658 - +1.8 1,416,658 - -1.9 1,416,658 - +0.2 1,416,658 - +0.6 1,416,658 - +0.5 1,416,658 - -1.0 1,416,658 - -0.7 1,416,658 - +2.8 1,416,658 - -2.5 1,416,658 - -0.4 1,416,658 - +1.8 1,416,658 - -1.9 1,416,658 - -2.2 1,416,658 - +1.2 1,416,658 - +0.2 1,416,658 - +0.2 1,416,658 - +3.2 1,416,658 - +0.2 1,416,658 - -1.8 1,416,658 - -1.3 1,416,658 - -0.6 1,416,658 - +1.8 1,416,658 - -0.8 1,416,658 - +1.2 1,416,658 - -2.5 1,416,658 - -2.5 1,416,658 - -0.4 1,416,658 - +0.2 1,416,658 - -1.2 1,416,658 - -0.8 1,416,658 - -0.4 1,416,658 - +0.2 1,416,658 - -0.4 1,416,658 - -0.8 1,416,658 - +0.5 1,416,658 - +1.2 1,416,658 - +0.8 1,416,658 - +2.8 1,416,658 - -2.4 1,416,658 - -0.1 1,416,658 - -2.0 1,416,658 - -1.0 1,416,658 - -0.4 1,416,658 - +1.2 1,416,658 - -1.8 1,416,658 - -1.0 1,416,658 - -1.2 1,416,658 - -2.0 1,416,658 - +0.8 1,416,658 - +2.2 1,416,658 - -0.2 1,416,658 - -1.0 1,416,658 - -1.8 1,416,658 - -0.2 1,416,658 - -2.1 1,416,658 - -1.2 1,416,658 - -1.4 1,416,658 - -0.9 1,416,658 - -1.8 1,416,658 - -0.9 1,416,658 - +1.9 1,416,658 - -2.7 1,416,658 - -0.4 1,416,658 - -2.2 1,416,658 - +1.2 1,416,658 - -0.3 1,416,658 - -4.2 1,416,658 - +0.8 1,416,658 - -0.2 1,416,658 - -1.6 1,416,658 - -0.5 1,416,658 - -2.0 1,416,658 - +1.2 1,416,658 - -2.5 1,416,658 - +0.3 1,416,658 - +0.4 1,416,658 - +0.2 1,416,658 - +0.2 1,416,658 - -0.4 1,416,658 - -2.2 1,416,658 - -1.2 1,416,658 - -0.4 1,416,781 + -1.2 1,416,782 - -0.6 1,416,782 - +0.2 1,417,058 + -2.2 1,417,059 - -1.8 1,417,059 - -1.2 1,417,059 - +0.8 1,417,059 - +0.8 1,417,155 + -3.4 1,417,155 + -1.9 1,417,155 + -1.5 1,417,156 - +0.1 1,417,156 - +0.2 1,417,156 - -0.3 1,417,156 - -1.4 1,417,156 - -1.2 1,417,379 + -1.2 1,417,379 + +2.2 1,417,379 + +0.6 1,417,379 + -1.2 1,417,379 + +0.5 1,417,379 + -0.3 1,417,379 + -1.8 1,417,379 + -0.9 1,417,379 + -1.8 1,417,379 + -1.4 1,417,379 + -1.0 1,417,379 + -3.5 1,417,379 + +0.8 1,417,379 + +0.2 1,417,379 + +0.8 1,417,379 + -1.6 1,417,379 + -0.5 1,417,379 + -2.4 1,417,379 + +1.9 1,417,379 + -1.2 1,417,380 - +0.9 1,417,380 - +0.4 1,417,380 - -0.2 1,417,380 - +0.4 1,417,380 - -1.6 1,417,380 - -1.3 1,417,380 - +0.9 1,417,380 - -1.4 1,417,380 - +0.2 1,417,380 - +0.2 1,417,380 - -0.5 1,417,380 - -1.2 1,417,380 - +0.3 1,417,380 - -1.4 1,417,380 - -1.5 1,417,380 - -2.4 1,417,380 - +2.5 1,417,380 - +1.2 1,417,380 - +0.4 1,417,380 - -2.2 1,417,380 - +0.5 1,417,380 - -0.2 1,417,380 - -0.8 1,417,380 - +0.2 1,417,380 - -0.5 1,417,380 - +1.6 1,417,380 - +0.2 1,417,380 - -0.4 1,417,380 - -1.4 1,417,380 - -0.4 1,417,380 - -1.8 1,417,382 + +0.2 1,417,382 + -0.0 1,417,383 - -1.4 1,417,383 - +1.2 1,417,383 - -0.6 1,417,400 + +0.7 1,417,400 + -2.5 1,417,515 - -1.1
Or see this region's nucleotide sequence