Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fusA and OKGIIK_01475 are separated by 291 nucleotides OKGIIK_01475 and OKGIIK_01480 overlap by 4 nucleotides
OKGIIK_01470: fusA - elongation factor G, at 329,154 to 331,283
fusA
OKGIIK_01475: OKGIIK_01475 - Response regulatory domain-containing protein, at 331,575 to 331,937
_01475
OKGIIK_01480: OKGIIK_01480 - Protein-glutamate O-methyltransferase, at 331,934 to 335,494
_01480
Position (kb) 331
332 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 330.718 kb on + strand, within fusA at 330.718 kb on + strand, within fusA at 330.719 kb on - strand, within fusA at 330.719 kb on - strand, within fusA at 330.719 kb on - strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.871 kb on + strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.872 kb on - strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.892 kb on + strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 330.893 kb on - strand, within fusA at 331.114 kb on + strand at 331.114 kb on + strand at 331.114 kb on + strand at 331.114 kb on + strand at 331.114 kb on + strand at 331.114 kb on + strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.115 kb on - strand at 331.186 kb on + strand at 331.186 kb on + strand at 331.186 kb on + strand at 331.187 kb on - strand at 331.187 kb on - strand at 331.187 kb on - strand at 331.187 kb on - strand at 331.187 kb on - strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.189 kb on + strand at 331.190 kb on - strand at 331.190 kb on - strand at 331.190 kb on - strand at 331.190 kb on - strand at 331.255 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.335 kb on + strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.336 kb on - strand at 331.400 kb on + strand at 331.624 kb on + strand, within OKGIIK_01475 at 331.624 kb on + strand, within OKGIIK_01475 at 331.624 kb on + strand, within OKGIIK_01475 at 331.625 kb on - strand, within OKGIIK_01475 at 331.625 kb on - strand, within OKGIIK_01475 at 331.625 kb on - strand, within OKGIIK_01475 at 331.704 kb on + strand, within OKGIIK_01475 at 331.704 kb on + strand, within OKGIIK_01475 at 331.704 kb on + strand, within OKGIIK_01475 at 331.704 kb on + strand, within OKGIIK_01475 at 331.705 kb on - strand, within OKGIIK_01475 at 331.705 kb on - strand, within OKGIIK_01475 at 331.917 kb on + strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.918 kb on - strand at 331.925 kb on + strand at 331.925 kb on + strand at 331.925 kb on + strand at 331.926 kb on - strand at 331.926 kb on - strand at 331.926 kb on - strand at 331.961 kb on + strand at 331.961 kb on + strand at 331.961 kb on + strand at 331.961 kb on + strand at 331.961 kb on + strand at 331.961 kb on + strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.962 kb on - strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.963 kb on + strand at 331.964 kb on - strand at 331.964 kb on - strand at 331.966 kb on - strand at 332.006 kb on + strand at 332.006 kb on + strand at 332.007 kb on - strand at 332.007 kb on - strand at 332.025 kb on + strand at 332.026 kb on - strand at 332.026 kb on - strand at 332.193 kb on + strand at 332.193 kb on + strand at 332.193 kb on + strand at 332.193 kb on + strand at 332.194 kb on - strand at 332.194 kb on - strand at 332.279 kb on + strand at 332.279 kb on + strand at 332.280 kb on - strand at 332.280 kb on - strand at 332.493 kb on - strand, within OKGIIK_01480 at 332.548 kb on + strand, within OKGIIK_01480 at 332.548 kb on + strand, within OKGIIK_01480 at 332.548 kb on + strand, within OKGIIK_01480 at 332.637 kb on + strand, within OKGIIK_01480 at 332.637 kb on + strand, within OKGIIK_01480 at 332.638 kb on - strand, within OKGIIK_01480 at 332.765 kb on + strand, within OKGIIK_01480 at 332.766 kb on - strand, within OKGIIK_01480 at 332.766 kb on - strand, within OKGIIK_01480 at 332.766 kb on - strand, within OKGIIK_01480 at 332.766 kb on - strand, within OKGIIK_01480 at 332.766 kb on - strand, within OKGIIK_01480
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 330,718 + fusA OKGIIK_01470 0.73 -0.2 330,718 + fusA OKGIIK_01470 0.73 +0.8 330,719 - fusA OKGIIK_01470 0.73 +0.1 330,719 - fusA OKGIIK_01470 0.73 +0.1 330,719 - fusA OKGIIK_01470 0.73 -0.8 330,871 + fusA OKGIIK_01470 0.81 -1.6 330,871 + fusA OKGIIK_01470 0.81 -2.1 330,871 + fusA OKGIIK_01470 0.81 -2.5 330,871 + fusA OKGIIK_01470 0.81 -1.3 330,871 + fusA OKGIIK_01470 0.81 -1.0 330,871 + fusA OKGIIK_01470 0.81 -0.5 330,871 + fusA OKGIIK_01470 0.81 +1.1 330,871 + fusA OKGIIK_01470 0.81 +0.5 330,872 - fusA OKGIIK_01470 0.81 +0.1 330,872 - fusA OKGIIK_01470 0.81 -0.5 330,872 - fusA OKGIIK_01470 0.81 +0.5 330,872 - fusA OKGIIK_01470 0.81 -2.4 330,872 - fusA OKGIIK_01470 0.81 -0.9 330,872 - fusA OKGIIK_01470 0.81 +0.1 330,872 - fusA OKGIIK_01470 0.81 -1.3 330,872 - fusA OKGIIK_01470 0.81 -0.9 330,892 + fusA OKGIIK_01470 0.82 -0.5 330,892 + fusA OKGIIK_01470 0.82 -1.6 330,892 + fusA OKGIIK_01470 0.82 +1.1 330,892 + fusA OKGIIK_01470 0.82 +0.3 330,892 + fusA OKGIIK_01470 0.82 +1.1 330,892 + fusA OKGIIK_01470 0.82 -0.1 330,892 + fusA OKGIIK_01470 0.82 -2.7 330,892 + fusA OKGIIK_01470 0.82 -0.5 330,892 + fusA OKGIIK_01470 0.82 +0.1 330,892 + fusA OKGIIK_01470 0.82 -0.7 330,892 + fusA OKGIIK_01470 0.82 -1.9 330,892 + fusA OKGIIK_01470 0.82 -2.5 330,892 + fusA OKGIIK_01470 0.82 +0.1 330,893 - fusA OKGIIK_01470 0.82 -1.3 330,893 - fusA OKGIIK_01470 0.82 -3.4 330,893 - fusA OKGIIK_01470 0.82 -1.1 330,893 - fusA OKGIIK_01470 0.82 -0.4 330,893 - fusA OKGIIK_01470 0.82 -0.7 330,893 - fusA OKGIIK_01470 0.82 -1.4 330,893 - fusA OKGIIK_01470 0.82 +1.1 330,893 - fusA OKGIIK_01470 0.82 +0.1 330,893 - fusA OKGIIK_01470 0.82 -0.3 331,114 + -0.1 331,114 + -2.2 331,114 + -0.9 331,114 + +0.1 331,114 + +0.7 331,114 + +1.7 331,115 - -0.6 331,115 - +2.1 331,115 - -0.6 331,115 - -1.0 331,115 - -1.2 331,115 - -2.3 331,115 - +0.1 331,115 - -0.6 331,186 + -2.4 331,186 + -1.5 331,186 + -0.9 331,187 - -0.8 331,187 - -0.5 331,187 - -2.8 331,187 - -0.5 331,187 - +0.3 331,189 + -2.2 331,189 + -1.4 331,189 + -2.1 331,189 + +0.8 331,189 + -0.9 331,189 + -0.2 331,189 + +2.7 331,189 + +1.1 331,190 - -0.1 331,190 - -1.9 331,190 - -1.1 331,190 - -0.7 331,255 + +0.7 331,335 + -1.2 331,335 + +0.1 331,335 + +0.3 331,335 + -0.2 331,335 + +0.2 331,335 + -0.9 331,335 + +0.1 331,335 + -1.1 331,335 + -1.5 331,336 - -1.2 331,336 - -1.9 331,336 - -3.1 331,336 - -0.1 331,336 - -0.0 331,336 - -0.4 331,336 - -0.7 331,336 - +0.1 331,400 + -2.6 331,624 + OKGIIK_01475 0.13 -1.1 331,624 + OKGIIK_01475 0.13 -1.1 331,624 + OKGIIK_01475 0.13 -3.4 331,625 - OKGIIK_01475 0.14 -0.2 331,625 - OKGIIK_01475 0.14 -2.7 331,625 - OKGIIK_01475 0.14 -1.9 331,704 + OKGIIK_01475 0.36 -2.6 331,704 + OKGIIK_01475 0.36 -0.4 331,704 + OKGIIK_01475 0.36 +0.1 331,704 + OKGIIK_01475 0.36 -0.5 331,705 - OKGIIK_01475 0.36 -1.5 331,705 - OKGIIK_01475 0.36 -2.1 331,917 + -0.7 331,918 - +0.6 331,918 - -0.8 331,918 - +0.6 331,918 - -3.6 331,918 - -1.7 331,918 - -1.7 331,918 - -0.5 331,918 - -0.1 331,925 + -1.5 331,925 + -0.6 331,925 + -1.8 331,926 - -1.4 331,926 - +1.6 331,926 - -2.0 331,961 + -1.8 331,961 + +0.2 331,961 + +0.1 331,961 + +1.7 331,961 + -2.1 331,961 + -0.5 331,962 - +0.5 331,962 - -0.7 331,962 - -2.6 331,962 - +0.2 331,962 - -0.5 331,962 - +0.1 331,962 - -1.4 331,962 - -1.2 331,963 + +1.5 331,963 + +1.1 331,963 + -0.5 331,963 + -1.5 331,963 + +0.1 331,963 + +0.1 331,963 + -1.9 331,963 + -2.4 331,963 + +0.7 331,964 - -1.0 331,964 - -2.1 331,966 - -0.2 332,006 + -2.7 332,006 + -0.7 332,007 - -2.3 332,007 - -0.6 332,025 + +0.5 332,026 - -1.7 332,026 - +0.9 332,193 + -1.2 332,193 + -0.9 332,193 + -2.7 332,193 + +1.4 332,194 - -0.2 332,194 - -2.5 332,279 + -0.9 332,279 + -1.2 332,280 - -1.5 332,280 - +0.5 332,493 - OKGIIK_01480 0.16 -1.2 332,548 + OKGIIK_01480 0.17 -1.5 332,548 + OKGIIK_01480 0.17 +2.2 332,548 + OKGIIK_01480 0.17 +1.5 332,637 + OKGIIK_01480 0.20 -0.1 332,637 + OKGIIK_01480 0.20 -0.5 332,638 - OKGIIK_01480 0.20 -0.5 332,765 + OKGIIK_01480 0.23 -0.4 332,766 - OKGIIK_01480 0.23 -0.2 332,766 - OKGIIK_01480 0.23 -1.5 332,766 - OKGIIK_01480 0.23 -2.2 332,766 - OKGIIK_01480 0.23 -1.1 332,766 - OKGIIK_01480 0.23 -3.0
Or see this region's nucleotide sequence