Strain Fitness in Pseudomonas sp. RS175 around PFR28_01097

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
1,207,769	+				+0.1
1,207,770	-				-2.0
1,207,770	-				+0.1
1,207,795	+				-1.6
1,207,795	+				-1.0
1,207,795	+				+1.4
1,207,795	+				-0.6
1,207,795	+				-1.1
1,207,795	+				-0.1
1,207,796	-				-0.7
1,207,801	+				-2.1
1,207,801	+				-0.4
1,207,801	+				+1.2
1,207,802	-				-0.4
1,207,802	-				-1.8
1,207,814	+				-1.1
1,207,814	+				-1.1
1,207,814	+				+0.2
1,207,814	+				+0.8
1,207,814	+				+1.2
1,207,815	-				+0.5
1,207,815	-				+0.1
1,207,815	-				-0.6
1,207,895	+				+1.2
1,207,895	+				+0.9
1,207,895	+				+1.2
1,207,895	+				-0.8
1,207,896	-				-1.1
1,207,897	+				+0.9
1,207,897	+				+0.6
1,207,897	+				-0.8
1,207,898	-				-0.8
1,207,898	-				-1.3
1,207,898	-				+0.7
1,207,898	-				-1.1
1,207,992	+		PFR28_01096	0.10	+0.4
1,208,144	+		PFR28_01096	0.32	+1.5
1,208,144	+		PFR28_01096	0.32	+0.0
1,208,144	+		PFR28_01096	0.32	+0.1
1,208,144	+		PFR28_01096	0.32	+1.9
1,208,144	+		PFR28_01096	0.32	+0.7
1,208,144	+		PFR28_01096	0.32	+0.0
1,208,145	-		PFR28_01096	0.32	+0.1
1,208,145	-		PFR28_01096	0.32	+0.6
1,208,145	-		PFR28_01096	0.32	+0.2
1,208,226	-		PFR28_01096	0.43	+0.7
1,208,243	+		PFR28_01096	0.46	-0.3
1,208,243	+		PFR28_01096	0.46	-0.0
1,208,243	+		PFR28_01096	0.46	+0.8
1,208,243	+		PFR28_01096	0.46	-0.4
1,208,244	-		PFR28_01096	0.46	-0.3
1,208,244	-		PFR28_01096	0.46	-0.7
1,208,244	-		PFR28_01096	0.46	-1.0
1,208,354	+		PFR28_01096	0.62	+0.4
1,208,354	+		PFR28_01096	0.62	+0.7
1,208,354	+		PFR28_01096	0.62	-1.1
1,208,354	+		PFR28_01096	0.62	+0.5
1,208,354	+		PFR28_01096	0.62	+0.3
1,208,354	+		PFR28_01096	0.62	+0.7
1,208,354	+		PFR28_01096	0.62	-0.4
1,208,354	+		PFR28_01096	0.62	-0.2
1,208,355	-		PFR28_01096	0.62	-1.3
1,208,355	-		PFR28_01096	0.62	+0.6
1,208,355	-		PFR28_01096	0.62	+0.1
1,208,355	-		PFR28_01096	0.62	-0.4
1,208,355	-		PFR28_01096	0.62	+0.3
1,208,471	+		PFR28_01096	0.79	+0.9
1,208,471	+		PFR28_01096	0.79	-0.7
1,208,471	+		PFR28_01096	0.79	+0.3
1,208,472	-		PFR28_01096	0.79	-0.8
1,208,472	-		PFR28_01096	0.79	-0.1
1,208,473	+		PFR28_01096	0.79	-0.1
1,208,473	+		PFR28_01096	0.79	-0.1
1,208,473	+		PFR28_01096	0.79	-1.9
1,208,473	+		PFR28_01096	0.79	-1.3
1,208,473	+		PFR28_01096	0.79	+0.9
1,208,473	+		PFR28_01096	0.79	-0.5
1,208,473	+		PFR28_01096	0.79	+0.1
1,208,473	+		PFR28_01096	0.79	-1.1
1,208,473	+		PFR28_01096	0.79	-0.0
1,208,473	+		PFR28_01096	0.79	+1.0
1,208,474	-		PFR28_01096	0.79	+0.5
1,208,474	-		PFR28_01096	0.79	+1.7
1,208,474	-		PFR28_01096	0.79	+1.0
1,208,474	-		PFR28_01096	0.79	-0.5
1,208,474	-		PFR28_01096	0.79	-1.4
1,208,474	-		PFR28_01096	0.79	-0.2
1,208,474	-		PFR28_01096	0.79	+1.6
1,208,474	-		PFR28_01096	0.79	-0.1
1,208,716	-				+0.4
1,208,794	-				+0.2
1,208,794	-				+0.5
1,208,800	+				+0.2
1,208,800	+				-2.0
1,208,809	+				-0.5
1,209,678	+		PFR28_01097	0.58	-0.5
1,209,678	+		PFR28_01097	0.58	-0.2
1,209,678	+		PFR28_01097	0.58	-0.3
1,209,678	+		PFR28_01097	0.58	-1.0
1,209,678	+		PFR28_01097	0.58	-0.6
1,209,678	+		PFR28_01097	0.58	-1.4
1,209,678	+		PFR28_01097	0.58	+0.0
1,209,678	+		PFR28_01097	0.58	-0.6
1,209,679	-		PFR28_01097	0.58	-0.8
1,209,679	-		PFR28_01097	0.58	-0.3
1,209,679	-		PFR28_01097	0.58	+0.2
1,209,679	-		PFR28_01097	0.58	-0.7
1,209,679	-		PFR28_01097	0.58	-0.0
1,209,679	-		PFR28_01097	0.58	-0.9
1,209,679	-		PFR28_01097	0.58	-0.4
1,209,833	+		PFR28_01097	0.68	-1.8
1,209,834	-		PFR28_01097	0.68	-1.2
1,209,834	-		PFR28_01097	0.68	-1.1
1,209,885	-		PFR28_01097	0.72	-0.2
1,210,038	+		PFR28_01097	0.81	-1.5
1,210,039	-		PFR28_01097	0.81	-0.4
1,210,039	-		PFR28_01097	0.81	+0.1
1,210,053	+		PFR28_01097	0.82	-0.8
1,210,054	-		PFR28_01097	0.82	-1.4
1,210,118	-		PFR28_01097	0.86	-2.2
1,210,126	+		PFR28_01097	0.87	+0.0
1,210,126	+		PFR28_01097	0.87	-0.2
1,210,126	+		PFR28_01097	0.87	-1.3
1,210,127	-		PFR28_01097	0.87	+1.2
1,210,236	+				-0.3
1,210,236	+				-0.9
1,210,236	+				-1.0
1,210,236	+				-0.4
1,210,237	-				-1.3
1,210,237	-				-1.0
1,210,237	-				-1.0
1,210,237	-				-1.8
1,210,324	+				-0.2
1,210,324	+				-0.3
1,210,324	+				+1.2
1,210,324	+				-0.4
1,210,325	-				-0.6
1,210,337	+				-1.4
1,210,337	+				-0.9
1,210,337	+				-0.0
1,210,337	+				-0.2
1,210,338	-				-1.4
1,210,338	-				-0.5
1,210,338	-				-0.3
1,210,338	-				-1.5
1,210,338	-				+0.1
1,210,338	-				-2.4
1,210,338	-				-1.2
1,210,377	+				+0.4
1,210,377	+				+0.1
1,210,377	+				-2.1
1,210,378	-				+1.4
1,210,378	-				-0.5
1,210,381	+				-0.4
1,210,381	+				-2.8
1,210,381	+				+0.2
1,210,381	+				+0.7
1,210,382	-				-0.2
1,210,423	+				-0.5
1,210,423	+				-1.2
1,210,427	+				-0.2
1,210,427	+				+0.7
1,210,427	+				+0.0
1,210,427	+				+0.4
1,210,427	+				-0.8
1,210,427	+				-0.3
1,210,427	+				+0.0
1,210,428	-				+0.2
1,210,428	-				-0.2
1,210,428	-				+0.1
1,210,428	-				-0.2
1,210,428	-				+1.9
1,210,428	-				+0.6
1,210,428	-				+0.1
1,210,567	-		PFR28_01098	0.20	+0.1
1,210,567	-		PFR28_01098	0.20	+0.0
1,210,567	-		PFR28_01098	0.20	+1.2
1,210,567	-		PFR28_01098	0.20	-0.2
1,210,658	-		PFR28_01098	0.32	-1.0
1,210,658	-		PFR28_01098	0.32	+0.8
1,210,695	+		PFR28_01098	0.37	+0.3
1,210,912	+		PFR28_01098	0.64	-0.3
1,210,912	+		PFR28_01098	0.64	+0.1
1,210,912	+		PFR28_01098	0.64	-0.4
1,210,912	+		PFR28_01098	0.64	+0.3
1,210,912	+		PFR28_01098	0.64	+0.2
1,210,912	+		PFR28_01098	0.64	-0.2
1,210,912	+		PFR28_01098	0.64	+0.0
1,210,913	-		PFR28_01098	0.64	+1.4
1,210,913	-		PFR28_01098	0.64	+1.2
1,210,913	-		PFR28_01098	0.64	-0.1
1,210,913	-		PFR28_01098	0.64	-0.3
1,210,913	-		PFR28_01098	0.64	+0.7
1,210,913	-		PFR28_01098	0.64	-0.8
1,210,913	-		PFR28_01098	0.64	-0.4
1,210,913	-		PFR28_01098	0.64	-0.6
1,210,913	-		PFR28_01098	0.64	+0.6
1,210,913	-		PFR28_01098	0.64	+0.6
1,211,131	+				-0.1
1,211,131	+				-0.3
1,211,173	+				-0.2
1,211,174	-				-0.9
1,211,174	-				+1.2
1,211,195	+				-0.0
1,211,196	-				+0.7
1,211,196	-				-0.4
1,211,196	-				+0.2
1,211,196	-				-0.8
1,211,239	+				+0.0
1,211,239	+				-0.4
1,211,239	+				-1.1
1,211,239	+				+0.2
1,211,240	-				+0.1
1,211,240	-				+0.1
1,211,241	+				+0.7
1,211,242	-				+0.5
1,211,254	+				-0.7
1,211,289	+				+0.0
1,211,289	+				-0.4