Experiment: R2A_PIPES with Cobalt chloride 512 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt feoB and feoA overlap by 4 nucleotides feoA and OKGIIK_09325 are separated by 116 nucleotides OKGIIK_09325 and OKGIIK_09330 overlap by 4 nucleotides OKGIIK_09330 and OKGIIK_09335 are separated by 102 nucleotides
OKGIIK_09315: feoB - ferrous iron transport protein B, at 2,022,612 to 2,024,447
feoB
OKGIIK_09320: feoA - ferrous iron transport protein A, at 2,024,444 to 2,024,689
feoA
OKGIIK_09325: OKGIIK_09325 - Enoyl-CoA hydratase, at 2,024,806 to 2,025,612
_09325
OKGIIK_09330: OKGIIK_09330 - Cupin, at 2,025,609 to 2,026,127
_09330
OKGIIK_09335: OKGIIK_09335 - 3-methylcrotonyl-CoA carboxylase, at 2,026,230 to 2,028,224
_09335
Position (kb)
2024
2025
2026 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.917 kb on + strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.918 kb on - strand, within feoB at 2023.947 kb on + strand, within feoB at 2023.947 kb on + strand, within feoB at 2023.947 kb on + strand, within feoB at 2023.947 kb on + strand, within feoB at 2023.947 kb on + strand, within feoB at 2023.948 kb on - strand, within feoB at 2023.948 kb on - strand, within feoB at 2023.948 kb on - strand, within feoB at 2023.989 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.257 kb on + strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.258 kb on - strand, within feoB at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.344 kb on + strand at 2024.345 kb on - strand at 2024.345 kb on - strand at 2024.345 kb on - strand at 2024.345 kb on - strand at 2024.345 kb on - strand at 2024.712 kb on + strand at 2024.722 kb on + strand at 2024.722 kb on + strand at 2024.723 kb on - strand at 2024.774 kb on + strand at 2024.774 kb on + strand at 2024.775 kb on - strand at 2024.775 kb on - strand at 2024.775 kb on - strand at 2024.775 kb on - strand at 2024.775 kb on - strand at 2024.785 kb on + strand at 2024.785 kb on + strand at 2024.785 kb on + strand at 2024.785 kb on + strand at 2024.785 kb on + strand at 2024.786 kb on - strand at 2025.133 kb on + strand, within OKGIIK_09325 at 2025.133 kb on + strand, within OKGIIK_09325 at 2025.187 kb on - strand, within OKGIIK_09325 at 2025.247 kb on + strand, within OKGIIK_09325 at 2025.247 kb on + strand, within OKGIIK_09325 at 2025.248 kb on - strand, within OKGIIK_09325 at 2025.248 kb on - strand, within OKGIIK_09325 at 2025.354 kb on - strand, within OKGIIK_09325 at 2025.354 kb on - strand, within OKGIIK_09325 at 2025.696 kb on + strand, within OKGIIK_09330 at 2025.696 kb on + strand, within OKGIIK_09330 at 2025.696 kb on + strand, within OKGIIK_09330 at 2025.696 kb on + strand, within OKGIIK_09330 at 2025.696 kb on + strand, within OKGIIK_09330 at 2025.697 kb on - strand, within OKGIIK_09330 at 2025.697 kb on - strand, within OKGIIK_09330 at 2025.697 kb on - strand, within OKGIIK_09330 at 2025.750 kb on + strand, within OKGIIK_09330 at 2025.750 kb on + strand, within OKGIIK_09330 at 2025.750 kb on + strand, within OKGIIK_09330 at 2025.750 kb on + strand, within OKGIIK_09330 at 2025.751 kb on - strand, within OKGIIK_09330 at 2025.751 kb on - strand, within OKGIIK_09330 at 2025.751 kb on - strand, within OKGIIK_09330 at 2025.963 kb on + strand, within OKGIIK_09330 at 2025.964 kb on - strand, within OKGIIK_09330 at 2025.964 kb on - strand, within OKGIIK_09330 at 2025.964 kb on - strand, within OKGIIK_09330 at 2025.964 kb on - strand, within OKGIIK_09330 at 2026.006 kb on - strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.023 kb on + strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.024 kb on - strand, within OKGIIK_09330 at 2026.110 kb on + strand at 2026.110 kb on + strand at 2026.110 kb on + strand at 2026.111 kb on - strand at 2026.111 kb on - strand at 2026.111 kb on - strand at 2026.111 kb on - strand at 2026.183 kb on + strand at 2026.183 kb on + strand at 2026.183 kb on + strand at 2026.183 kb on + strand at 2026.183 kb on + strand at 2026.184 kb on - strand at 2026.184 kb on - strand at 2026.184 kb on - strand at 2026.184 kb on - strand at 2026.243 kb on + strand at 2026.243 kb on + strand at 2026.243 kb on + strand at 2026.243 kb on + strand at 2026.243 kb on + strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.244 kb on - strand at 2026.323 kb on + strand at 2026.323 kb on + strand at 2026.323 kb on + strand at 2026.323 kb on + strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.324 kb on - strand at 2026.407 kb on + strand at 2026.407 kb on + strand at 2026.407 kb on + strand at 2026.408 kb on - strand at 2026.408 kb on - strand at 2026.408 kb on - strand at 2026.408 kb on - strand at 2026.408 kb on - strand at 2026.408 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 512 uM remove 2,023,917 + feoB OKGIIK_09315 0.71 +1.5 2,023,917 + feoB OKGIIK_09315 0.71 +1.9 2,023,917 + feoB OKGIIK_09315 0.71 +3.8 2,023,917 + feoB OKGIIK_09315 0.71 +1.2 2,023,917 + feoB OKGIIK_09315 0.71 +4.4 2,023,917 + feoB OKGIIK_09315 0.71 +1.5 2,023,917 + feoB OKGIIK_09315 0.71 +1.0 2,023,917 + feoB OKGIIK_09315 0.71 +2.5 2,023,917 + feoB OKGIIK_09315 0.71 +2.8 2,023,917 + feoB OKGIIK_09315 0.71 +1.1 2,023,917 + feoB OKGIIK_09315 0.71 +2.4 2,023,917 + feoB OKGIIK_09315 0.71 +0.7 2,023,918 - feoB OKGIIK_09315 0.71 +2.7 2,023,918 - feoB OKGIIK_09315 0.71 +3.2 2,023,918 - feoB OKGIIK_09315 0.71 +3.2 2,023,918 - feoB OKGIIK_09315 0.71 +2.1 2,023,918 - feoB OKGIIK_09315 0.71 +1.2 2,023,918 - feoB OKGIIK_09315 0.71 +2.1 2,023,918 - feoB OKGIIK_09315 0.71 +2.2 2,023,918 - feoB OKGIIK_09315 0.71 +3.8 2,023,918 - feoB OKGIIK_09315 0.71 +3.6 2,023,918 - feoB OKGIIK_09315 0.71 +0.7 2,023,918 - feoB OKGIIK_09315 0.71 +2.4 2,023,947 + feoB OKGIIK_09315 0.73 +4.4 2,023,947 + feoB OKGIIK_09315 0.73 +2.8 2,023,947 + feoB OKGIIK_09315 0.73 +3.2 2,023,947 + feoB OKGIIK_09315 0.73 +1.1 2,023,947 + feoB OKGIIK_09315 0.73 +3.0 2,023,948 - feoB OKGIIK_09315 0.73 +5.1 2,023,948 - feoB OKGIIK_09315 0.73 +1.6 2,023,948 - feoB OKGIIK_09315 0.73 +0.6 2,023,989 + feoB OKGIIK_09315 0.75 +2.4 2,024,257 + feoB OKGIIK_09315 0.90 +1.1 2,024,257 + feoB OKGIIK_09315 0.90 +3.6 2,024,257 + feoB OKGIIK_09315 0.90 +4.9 2,024,257 + feoB OKGIIK_09315 0.90 +2.2 2,024,257 + feoB OKGIIK_09315 0.90 +0.2 2,024,257 + feoB OKGIIK_09315 0.90 +3.7 2,024,257 + feoB OKGIIK_09315 0.90 +3.1 2,024,257 + feoB OKGIIK_09315 0.90 +0.2 2,024,257 + feoB OKGIIK_09315 0.90 +2.5 2,024,257 + feoB OKGIIK_09315 0.90 +2.1 2,024,257 + feoB OKGIIK_09315 0.90 +3.6 2,024,258 - feoB OKGIIK_09315 0.90 +3.6 2,024,258 - feoB OKGIIK_09315 0.90 +3.2 2,024,258 - feoB OKGIIK_09315 0.90 +3.6 2,024,258 - feoB OKGIIK_09315 0.90 +2.7 2,024,258 - feoB OKGIIK_09315 0.90 +1.9 2,024,258 - feoB OKGIIK_09315 0.90 +3.1 2,024,258 - feoB OKGIIK_09315 0.90 +2.3 2,024,258 - feoB OKGIIK_09315 0.90 +2.4 2,024,258 - feoB OKGIIK_09315 0.90 +4.5 2,024,258 - feoB OKGIIK_09315 0.90 +2.5 2,024,258 - feoB OKGIIK_09315 0.90 +1.7 2,024,258 - feoB OKGIIK_09315 0.90 +2.1 2,024,258 - feoB OKGIIK_09315 0.90 +2.2 2,024,258 - feoB OKGIIK_09315 0.90 -1.3 2,024,258 - feoB OKGIIK_09315 0.90 +1.5 2,024,258 - feoB OKGIIK_09315 0.90 +2.6 2,024,258 - feoB OKGIIK_09315 0.90 +3.6 2,024,258 - feoB OKGIIK_09315 0.90 +3.0 2,024,258 - feoB OKGIIK_09315 0.90 +3.1 2,024,344 + +2.8 2,024,344 + +2.5 2,024,344 + +3.7 2,024,344 + +3.7 2,024,344 + +3.7 2,024,344 + +2.1 2,024,344 + +3.4 2,024,345 - +3.4 2,024,345 - +2.7 2,024,345 - +4.4 2,024,345 - -1.1 2,024,345 - +2.7 2,024,712 + +3.3 2,024,722 + +5.2 2,024,722 + +3.4 2,024,723 - -0.3 2,024,774 + +2.2 2,024,774 + +1.4 2,024,775 - -2.1 2,024,775 - -0.8 2,024,775 - +1.5 2,024,775 - -0.5 2,024,775 - -1.3 2,024,785 + +2.0 2,024,785 + +1.9 2,024,785 + +1.5 2,024,785 + -1.3 2,024,785 + -1.8 2,024,786 - -1.0 2,025,133 + OKGIIK_09325 0.41 -1.3 2,025,133 + OKGIIK_09325 0.41 -2.4 2,025,187 - OKGIIK_09325 0.47 -3.4 2,025,247 + OKGIIK_09325 0.55 -1.1 2,025,247 + OKGIIK_09325 0.55 -1.7 2,025,248 - OKGIIK_09325 0.55 +0.8 2,025,248 - OKGIIK_09325 0.55 -1.5 2,025,354 - OKGIIK_09325 0.68 -2.0 2,025,354 - OKGIIK_09325 0.68 +3.5 2,025,696 + OKGIIK_09330 0.17 -1.0 2,025,696 + OKGIIK_09330 0.17 -1.3 2,025,696 + OKGIIK_09330 0.17 -1.7 2,025,696 + OKGIIK_09330 0.17 -0.9 2,025,696 + OKGIIK_09330 0.17 -0.1 2,025,697 - OKGIIK_09330 0.17 -0.1 2,025,697 - OKGIIK_09330 0.17 +1.5 2,025,697 - OKGIIK_09330 0.17 -1.9 2,025,750 + OKGIIK_09330 0.27 -0.5 2,025,750 + OKGIIK_09330 0.27 -0.5 2,025,750 + OKGIIK_09330 0.27 +1.0 2,025,750 + OKGIIK_09330 0.27 -1.5 2,025,751 - OKGIIK_09330 0.27 +1.5 2,025,751 - OKGIIK_09330 0.27 +1.9 2,025,751 - OKGIIK_09330 0.27 +0.2 2,025,963 + OKGIIK_09330 0.68 +0.5 2,025,964 - OKGIIK_09330 0.68 +0.5 2,025,964 - OKGIIK_09330 0.68 -0.3 2,025,964 - OKGIIK_09330 0.68 -1.3 2,025,964 - OKGIIK_09330 0.68 -1.4 2,026,006 - OKGIIK_09330 0.76 -1.5 2,026,023 + OKGIIK_09330 0.80 -0.6 2,026,023 + OKGIIK_09330 0.80 -0.7 2,026,023 + OKGIIK_09330 0.80 -0.3 2,026,023 + OKGIIK_09330 0.80 -1.0 2,026,023 + OKGIIK_09330 0.80 -2.1 2,026,023 + OKGIIK_09330 0.80 -1.1 2,026,023 + OKGIIK_09330 0.80 -2.3 2,026,023 + OKGIIK_09330 0.80 -1.1 2,026,023 + OKGIIK_09330 0.80 -1.5 2,026,023 + OKGIIK_09330 0.80 -1.1 2,026,023 + OKGIIK_09330 0.80 -0.1 2,026,023 + OKGIIK_09330 0.80 -1.2 2,026,023 + OKGIIK_09330 0.80 +1.1 2,026,024 - OKGIIK_09330 0.80 -0.1 2,026,024 - OKGIIK_09330 0.80 -0.8 2,026,024 - OKGIIK_09330 0.80 +0.5 2,026,024 - OKGIIK_09330 0.80 -2.9 2,026,024 - OKGIIK_09330 0.80 -0.5 2,026,024 - OKGIIK_09330 0.80 +1.5 2,026,024 - OKGIIK_09330 0.80 -0.8 2,026,024 - OKGIIK_09330 0.80 +0.5 2,026,024 - OKGIIK_09330 0.80 -0.1 2,026,024 - OKGIIK_09330 0.80 -1.5 2,026,024 - OKGIIK_09330 0.80 -1.5 2,026,024 - OKGIIK_09330 0.80 -1.1 2,026,110 + -0.9 2,026,110 + -2.0 2,026,110 + +1.5 2,026,111 - -1.8 2,026,111 - -2.7 2,026,111 - -1.1 2,026,111 - +0.5 2,026,183 + +2.1 2,026,183 + -1.8 2,026,183 + -0.1 2,026,183 + +1.5 2,026,183 + -1.1 2,026,184 - -1.7 2,026,184 - -0.8 2,026,184 - +1.5 2,026,184 - +1.5 2,026,243 + -1.5 2,026,243 + +0.5 2,026,243 + -2.7 2,026,243 + -0.5 2,026,243 + +0.2 2,026,244 - +2.8 2,026,244 - -0.2 2,026,244 - -0.1 2,026,244 - -0.1 2,026,244 - -2.4 2,026,244 - +0.5 2,026,244 - -0.8 2,026,323 + -0.1 2,026,323 + -0.2 2,026,323 + +1.5 2,026,323 + -0.5 2,026,324 - -0.1 2,026,324 - -1.0 2,026,324 - -3.0 2,026,324 - +1.9 2,026,324 - -1.7 2,026,324 - -0.7 2,026,324 - -1.9 2,026,324 - -0.8 2,026,324 - -1.3 2,026,324 - -1.5 2,026,407 + -0.4 2,026,407 + -3.4 2,026,407 + -1.9 2,026,408 - +1.5 2,026,408 - -3.0 2,026,408 - -0.5 2,026,408 - -1.2 2,026,408 - -1.6 2,026,408 - -1.5
Or see this region's nucleotide sequence