Experiment: R2A_PIPES with Cobalt chloride 512 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03765 and OKGIIK_03770 are separated by 8 nucleotides OKGIIK_03770 and ppx are separated by 66 nucleotides
OKGIIK_03765: OKGIIK_03765 - UDP-2,3-diacylglucosamine diphosphatase, at 830,449 to 831,177
_03765
OKGIIK_03770: OKGIIK_03770 - Peptidyl-prolyl cis-trans isomerase, at 831,186 to 831,887
_03770
OKGIIK_03775: ppx - exopolyphosphatase, at 831,954 to 833,471
ppx
Position (kb) 831
832 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 830.247 kb on + strand at 830.247 kb on + strand at 830.248 kb on - strand at 830.248 kb on - strand at 830.248 kb on - strand at 830.248 kb on - strand at 830.248 kb on - strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.268 kb on + strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.269 kb on - strand at 830.297 kb on + strand at 830.297 kb on + strand at 830.297 kb on + strand at 830.297 kb on + strand at 830.297 kb on + strand at 830.297 kb on + strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.298 kb on - strand at 830.415 kb on + strand at 831.423 kb on - strand, within OKGIIK_03770 at 831.425 kb on - strand, within OKGIIK_03770 at 831.425 kb on - strand, within OKGIIK_03770 at 831.623 kb on - strand, within OKGIIK_03770 at 831.623 kb on - strand, within OKGIIK_03770 at 831.623 kb on - strand, within OKGIIK_03770 at 831.644 kb on - strand, within OKGIIK_03770 at 831.680 kb on - strand, within OKGIIK_03770 at 831.680 kb on - strand, within OKGIIK_03770 at 831.698 kb on - strand, within OKGIIK_03770 at 831.698 kb on - strand, within OKGIIK_03770 at 831.698 kb on - strand, within OKGIIK_03770 at 831.740 kb on - strand, within OKGIIK_03770 at 831.740 kb on - strand, within OKGIIK_03770 at 831.921 kb on + strand at 831.921 kb on + strand at 831.921 kb on + strand at 831.921 kb on + strand at 831.921 kb on + strand at 831.921 kb on + strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.922 kb on - strand at 831.968 kb on + strand at 831.968 kb on + strand at 831.968 kb on + strand at 831.968 kb on + strand at 831.968 kb on + strand at 831.968 kb on + strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 831.969 kb on - strand at 832.168 kb on + strand, within ppx at 832.168 kb on + strand, within ppx at 832.168 kb on + strand, within ppx at 832.168 kb on + strand, within ppx at 832.169 kb on - strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.309 kb on + strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.310 kb on - strand, within ppx at 832.822 kb on + strand, within ppx at 832.822 kb on + strand, within ppx at 832.822 kb on + strand, within ppx at 832.823 kb on - strand, within ppx at 832.823 kb on - strand, within ppx at 832.823 kb on - strand, within ppx at 832.823 kb on - strand, within ppx at 832.849 kb on + strand, within ppx at 832.849 kb on + strand, within ppx at 832.850 kb on - strand, within ppx
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 512 uM remove 830,247 + -1.7 830,247 + +0.9 830,248 - -0.9 830,248 - -0.1 830,248 - -0.9 830,248 - -1.1 830,248 - -2.0 830,268 + -0.9 830,268 + -2.7 830,268 + +0.3 830,268 + -2.1 830,268 + -1.9 830,268 + -1.9 830,268 + -0.5 830,268 + -0.8 830,268 + +0.1 830,268 + -1.3 830,268 + -1.5 830,268 + -1.3 830,269 - +0.1 830,269 - -2.0 830,269 - -2.1 830,269 - -2.4 830,269 - -1.0 830,269 - -1.5 830,269 - -1.6 830,269 - -0.3 830,269 - -0.5 830,269 - -1.1 830,269 - +0.6 830,269 - +0.5 830,269 - -1.0 830,297 + -2.6 830,297 + -1.5 830,297 + -0.9 830,297 + -2.4 830,297 + -0.7 830,297 + +1.8 830,298 - -2.3 830,298 - -1.8 830,298 - +3.0 830,298 - +1.5 830,298 - -2.2 830,298 - -0.9 830,298 - -1.3 830,415 + +2.8 831,423 - OKGIIK_03770 0.34 -0.5 831,425 - OKGIIK_03770 0.34 -0.5 831,425 - OKGIIK_03770 0.34 -0.9 831,623 - OKGIIK_03770 0.62 -1.3 831,623 - OKGIIK_03770 0.62 -3.4 831,623 - OKGIIK_03770 0.62 -1.9 831,644 - OKGIIK_03770 0.65 -1.4 831,680 - OKGIIK_03770 0.70 -1.3 831,680 - OKGIIK_03770 0.70 -0.1 831,698 - OKGIIK_03770 0.73 -0.1 831,698 - OKGIIK_03770 0.73 -1.2 831,698 - OKGIIK_03770 0.73 -2.0 831,740 - OKGIIK_03770 0.79 -2.5 831,740 - OKGIIK_03770 0.79 -0.1 831,921 + -1.5 831,921 + -1.1 831,921 + -1.7 831,921 + +1.5 831,921 + +0.7 831,921 + -0.5 831,922 - -1.5 831,922 - -1.3 831,922 - +0.5 831,922 - -1.7 831,922 - +1.5 831,922 - -1.5 831,922 - +2.2 831,922 - +1.9 831,922 - -1.0 831,922 - -2.4 831,922 - -0.9 831,922 - -2.7 831,922 - -1.3 831,968 + -1.1 831,968 + -2.2 831,968 + -0.9 831,968 + +0.5 831,968 + +0.5 831,968 + -1.3 831,969 - -1.5 831,969 - -1.1 831,969 - -1.9 831,969 - -0.9 831,969 - -2.7 831,969 - -1.1 831,969 - -0.9 831,969 - -1.3 831,969 - +1.5 831,969 - -4.1 831,969 - -0.5 832,168 + ppx OKGIIK_03775 0.14 -1.1 832,168 + ppx OKGIIK_03775 0.14 +0.3 832,168 + ppx OKGIIK_03775 0.14 -1.3 832,168 + ppx OKGIIK_03775 0.14 -1.7 832,169 - ppx OKGIIK_03775 0.14 -1.7 832,309 + ppx OKGIIK_03775 0.23 -0.9 832,309 + ppx OKGIIK_03775 0.23 -0.5 832,309 + ppx OKGIIK_03775 0.23 -1.3 832,309 + ppx OKGIIK_03775 0.23 -0.9 832,309 + ppx OKGIIK_03775 0.23 -0.1 832,309 + ppx OKGIIK_03775 0.23 +0.5 832,309 + ppx OKGIIK_03775 0.23 -1.3 832,309 + ppx OKGIIK_03775 0.23 -0.9 832,309 + ppx OKGIIK_03775 0.23 -1.3 832,309 + ppx OKGIIK_03775 0.23 -1.2 832,309 + ppx OKGIIK_03775 0.23 -1.1 832,309 + ppx OKGIIK_03775 0.23 -4.1 832,309 + ppx OKGIIK_03775 0.23 -1.5 832,309 + ppx OKGIIK_03775 0.23 -2.0 832,309 + ppx OKGIIK_03775 0.23 +1.0 832,309 + ppx OKGIIK_03775 0.23 -1.9 832,309 + ppx OKGIIK_03775 0.23 -2.0 832,309 + ppx OKGIIK_03775 0.23 -0.1 832,309 + ppx OKGIIK_03775 0.23 -0.1 832,309 + ppx OKGIIK_03775 0.23 -1.1 832,309 + ppx OKGIIK_03775 0.23 -1.8 832,309 + ppx OKGIIK_03775 0.23 -1.1 832,309 + ppx OKGIIK_03775 0.23 -0.7 832,309 + ppx OKGIIK_03775 0.23 -2.2 832,309 + ppx OKGIIK_03775 0.23 -1.3 832,309 + ppx OKGIIK_03775 0.23 -0.5 832,309 + ppx OKGIIK_03775 0.23 -1.5 832,309 + ppx OKGIIK_03775 0.23 -1.1 832,309 + ppx OKGIIK_03775 0.23 +1.5 832,310 - ppx OKGIIK_03775 0.23 -1.5 832,310 - ppx OKGIIK_03775 0.23 -0.6 832,310 - ppx OKGIIK_03775 0.23 -1.7 832,310 - ppx OKGIIK_03775 0.23 +1.5 832,310 - ppx OKGIIK_03775 0.23 -0.5 832,310 - ppx OKGIIK_03775 0.23 -1.6 832,310 - ppx OKGIIK_03775 0.23 -0.9 832,310 - ppx OKGIIK_03775 0.23 -0.9 832,310 - ppx OKGIIK_03775 0.23 -0.5 832,310 - ppx OKGIIK_03775 0.23 +0.2 832,310 - ppx OKGIIK_03775 0.23 -0.3 832,310 - ppx OKGIIK_03775 0.23 -2.3 832,310 - ppx OKGIIK_03775 0.23 -1.5 832,310 - ppx OKGIIK_03775 0.23 -1.7 832,310 - ppx OKGIIK_03775 0.23 -0.1 832,822 + ppx OKGIIK_03775 0.57 -1.1 832,822 + ppx OKGIIK_03775 0.57 -0.5 832,822 + ppx OKGIIK_03775 0.57 -0.5 832,823 - ppx OKGIIK_03775 0.57 -1.5 832,823 - ppx OKGIIK_03775 0.57 +0.5 832,823 - ppx OKGIIK_03775 0.57 -2.1 832,823 - ppx OKGIIK_03775 0.57 -1.9 832,849 + ppx OKGIIK_03775 0.59 +1.5 832,849 + ppx OKGIIK_03775 0.59 -0.8 832,850 - ppx OKGIIK_03775 0.59 -0.1
Or see this region's nucleotide sequence