Strain Fitness in Pseudomonas sp. RS175 around PFR28_02811

Experiment: L-pyroglutamic (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-pyroglutamic (C) 10 mM
3,282,109	+		PFR28_02810	0.27	-2.0
3,282,110	-		PFR28_02810	0.27	-3.8
3,282,261	+		PFR28_02810	0.39	-4.3
3,282,262	-		PFR28_02810	0.39	-5.1
3,282,574	+		PFR28_02810	0.65	-3.3
3,282,574	+		PFR28_02810	0.65	-2.2
3,282,575	-		PFR28_02810	0.65	-4.0
3,282,575	-		PFR28_02810	0.65	-1.7
3,282,605	-		PFR28_02810	0.67	+0.1
3,282,605	-		PFR28_02810	0.67	-3.7
3,282,605	-		PFR28_02810	0.67	-3.7
3,282,654	+		PFR28_02810	0.72	-4.0
3,282,654	+		PFR28_02810	0.72	-0.7
3,282,654	+		PFR28_02810	0.72	-2.5
3,282,654	+		PFR28_02810	0.72	-4.1
3,282,654	+		PFR28_02810	0.72	-1.9
3,282,654	+		PFR28_02810	0.72	-3.2
3,282,654	+		PFR28_02810	0.72	-3.2
3,282,655	-		PFR28_02810	0.72	-1.9
3,282,655	-		PFR28_02810	0.72	-3.8
3,282,655	-		PFR28_02810	0.72	-3.3
3,282,655	-		PFR28_02810	0.72	-2.8
3,282,655	-		PFR28_02810	0.72	-1.4
3,282,799	+		PFR28_02810	0.83	-3.3
3,282,800	-		PFR28_02810	0.84	-3.3
3,282,800	-		PFR28_02810	0.84	-0.7
3,282,858	+		PFR28_02810	0.88	-2.7
3,282,858	+		PFR28_02810	0.88	-2.0
3,282,858	+		PFR28_02810	0.88	-1.9
3,282,858	+		PFR28_02810	0.88	-2.6
3,282,858	+		PFR28_02810	0.88	-2.6
3,282,858	+		PFR28_02810	0.88	-4.5
3,282,859	-		PFR28_02810	0.88	-2.6
3,282,859	-		PFR28_02810	0.88	-0.3
3,282,859	-		PFR28_02810	0.88	-3.8
3,282,859	-		PFR28_02810	0.88	-3.6
3,282,859	-		PFR28_02810	0.88	-3.0
3,282,862	+		PFR28_02810	0.89	-2.5
3,282,862	+		PFR28_02810	0.89	-4.2
3,282,862	+		PFR28_02810	0.89	-4.2
3,282,862	+		PFR28_02810	0.89	-3.2
3,282,862	+		PFR28_02810	0.89	-2.7
3,282,862	+		PFR28_02810	0.89	-3.3
3,282,862	+		PFR28_02810	0.89	-2.7
3,282,862	+		PFR28_02810	0.89	-2.7
3,282,862	+		PFR28_02810	0.89	-2.5
3,282,862	+		PFR28_02810	0.89	-3.7
3,282,862	+		PFR28_02810	0.89	-3.3
3,282,862	+		PFR28_02810	0.89	-2.0
3,282,862	+		PFR28_02810	0.89	-1.0
3,282,862	+		PFR28_02810	0.89	-2.8
3,282,862	+		PFR28_02810	0.89	-2.6
3,282,862	+		PFR28_02810	0.89	-2.9
3,282,862	+		PFR28_02810	0.89	-1.3
3,282,862	+		PFR28_02810	0.89	-2.8
3,282,862	+		PFR28_02810	0.89	-2.7
3,282,862	+		PFR28_02810	0.89	-3.2
3,282,863	-		PFR28_02810	0.89	-2.8
3,282,863	-		PFR28_02810	0.89	-3.4
3,282,863	-		PFR28_02810	0.89	-3.4
3,282,863	-		PFR28_02810	0.89	-3.4
3,282,863	-		PFR28_02810	0.89	-5.2
3,282,863	-		PFR28_02810	0.89	-4.1
3,282,863	-		PFR28_02810	0.89	-5.4
3,282,863	-		PFR28_02810	0.89	-4.2
3,282,863	-		PFR28_02810	0.89	-1.7
3,282,863	-		PFR28_02810	0.89	-4.1
3,282,863	-		PFR28_02810	0.89	-2.9
3,282,863	-		PFR28_02810	0.89	-2.8
3,282,863	-		PFR28_02810	0.89	-3.0
3,282,863	-		PFR28_02810	0.89	-2.7
3,282,863	-		PFR28_02810	0.89	-4.2
3,282,863	-		PFR28_02810	0.89	-4.4
3,283,060	-				-0.3
3,283,060	-				-1.4
3,283,060	-				-2.1
3,283,061	+				-3.7
3,283,061	+				-1.7
3,283,061	+				-2.7
3,283,062	-				-1.3
3,283,062	-				+1.0
3,283,062	-				+0.1
3,283,139	+				-2.3
3,283,140	-				-0.7
3,283,140	-				-0.3
3,283,140	-				+0.3
3,283,166	+				-1.3
3,283,166	+				-2.7
3,283,166	+				-3.1
3,283,167	-				-1.3
3,283,167	-				+0.3
3,283,167	-				-1.7
3,283,253	+		PFR28_02811	0.13	-2.3
3,283,253	+		PFR28_02811	0.13	-0.7
3,283,253	+		PFR28_02811	0.13	-1.3
3,283,253	+		PFR28_02811	0.13	-0.7
3,283,254	-		PFR28_02811	0.13	-1.3
3,283,254	-		PFR28_02811	0.13	-1.3
3,283,347	-		PFR28_02811	0.20	-1.5
3,283,388	+		PFR28_02811	0.22	-0.7
3,283,388	+		PFR28_02811	0.22	-1.3
3,283,389	-		PFR28_02811	0.22	-0.7
3,283,389	-		PFR28_02811	0.22	-1.3
3,283,389	-		PFR28_02811	0.22	-3.0
3,283,523	-		PFR28_02811	0.31	-1.7
3,283,523	-		PFR28_02811	0.31	-1.7
3,283,868	+		PFR28_02811	0.54	-1.3
3,283,868	+		PFR28_02811	0.54	+0.3
3,283,869	-		PFR28_02811	0.54	-1.7
3,283,869	-		PFR28_02811	0.54	-0.3
3,283,869	-		PFR28_02811	0.54	-1.5
3,283,869	-		PFR28_02811	0.54	-1.7
3,283,928	-		PFR28_02811	0.58	-1.5
3,283,928	-		PFR28_02811	0.58	-1.0
3,283,949	+		PFR28_02811	0.60	-1.3
3,283,949	+		PFR28_02811	0.60	-0.3
3,283,949	+		PFR28_02811	0.60	-1.0
3,283,950	-		PFR28_02811	0.60	-2.4
3,283,950	-		PFR28_02811	0.60	-2.2
3,284,058	-		PFR28_02811	0.67	-1.0
3,284,214	-		PFR28_02811	0.77	-2.3
3,284,256	+		PFR28_02811	0.80	-0.7
3,284,291	+		PFR28_02811	0.82	-1.0
3,284,291	+		PFR28_02811	0.82	-2.5
3,284,291	+		PFR28_02811	0.82	-0.3
3,284,291	+		PFR28_02811	0.82	-2.9
3,284,291	+		PFR28_02811	0.82	+0.3
3,284,504	+				-2.0
3,284,505	-				-0.3
3,284,505	-				-1.5
3,284,505	-				-1.0
3,284,530	-				+1.3
3,284,570	+				-1.0
3,284,571	-				-3.0
3,284,571	-				-0.7
3,284,575	-				-1.2
3,284,575	-				-1.9
3,284,575	-				-0.7
3,284,625	+				-0.7
3,284,625	+				-1.0
3,284,625	+				+1.3
3,284,626	-				+0.4
3,284,626	-				-2.6
3,284,626	-				-0.2
3,284,626	-				-1.8
3,284,626	-				+0.1
3,284,626	-				-0.3
3,284,626	-				+0.5
3,284,626	-				-1.7
3,284,643	+				+0.3
3,284,643	+				-0.3
3,284,643	+				-1.0
3,284,644	-				+0.4
3,284,644	-				-1.3
3,284,644	-				-0.2
3,284,656	-		PFR28_02812	0.10	-0.1
3,284,664	-		PFR28_02812	0.12	-0.6
3,284,727	+		PFR28_02812	0.23	-1.7
3,284,905	+		PFR28_02812	0.55	-3.2
3,284,905	+		PFR28_02812	0.55	-1.5
3,284,906	-		PFR28_02812	0.55	-1.1
3,284,906	-		PFR28_02812	0.55	-0.6
3,284,906	-		PFR28_02812	0.55	-0.6
3,284,989	+		PFR28_02812	0.70	-1.8
3,284,989	+		PFR28_02812	0.70	-0.8
3,285,001	+		PFR28_02812	0.72	-1.1
3,285,001	+		PFR28_02812	0.72	-2.3
3,285,002	-		PFR28_02812	0.72	-2.1
3,285,149	+				-3.4
3,285,149	+				-1.9
3,285,150	-				+0.6
3,285,150	-				+0.1
3,285,168	+				-2.4
3,285,169	-				+0.3
3,285,215	+				+1.0
3,285,398	+		PFR28_02813	0.20	+0.4
3,285,398	+		PFR28_02813	0.20	-0.6
3,285,398	+		PFR28_02813	0.20	+0.4
3,285,400	+		PFR28_02813	0.21	-0.9
3,285,400	+		PFR28_02813	0.21	-0.6
3,285,400	+		PFR28_02813	0.21	+0.9
3,285,400	+		PFR28_02813	0.21	-0.1
3,285,400	+		PFR28_02813	0.21	+1.1
3,285,401	-		PFR28_02813	0.21	-0.7
3,285,401	-		PFR28_02813	0.21	-0.7
3,285,401	-		PFR28_02813	0.21	+0.1
3,285,401	-		PFR28_02813	0.21	+0.3
3,285,401	-		PFR28_02813	0.21	-0.1
3,285,401	-		PFR28_02813	0.21	-1.1
3,285,401	-		PFR28_02813	0.21	-0.3
3,285,409	+		PFR28_02813	0.22	+2.3
3,285,409	+		PFR28_02813	0.22	-0.5
3,285,409	+		PFR28_02813	0.22	+1.7
3,285,409	+		PFR28_02813	0.22	+0.6
3,285,409	+		PFR28_02813	0.22	+0.8
3,285,409	+		PFR28_02813	0.22	-0.5
3,285,410	-		PFR28_02813	0.22	+0.0