Strain Fitness in Pseudomonas sp. RS175 around PFR28_05207

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
5,951,958	-		PFR28_05205	0.68	-0.7
5,951,958	-		PFR28_05205	0.68	-0.6
5,951,958	-		PFR28_05205	0.68	-0.4
5,951,958	-		PFR28_05205	0.68	-0.0
5,951,958	-		PFR28_05205	0.68	-0.1
5,952,265	+		PFR28_05206	0.15	-0.5
5,952,265	+		PFR28_05206	0.15	-0.6
5,952,266	-		PFR28_05206	0.15	-1.9
5,952,391	+		PFR28_05206	0.32	-1.0
5,952,391	+		PFR28_05206	0.32	-0.8
5,952,391	+		PFR28_05206	0.32	-2.2
5,952,391	+		PFR28_05206	0.32	-0.7
5,952,391	+		PFR28_05206	0.32	-0.3
5,952,392	-		PFR28_05206	0.32	-1.4
5,952,392	-		PFR28_05206	0.32	-1.3
5,952,392	-		PFR28_05206	0.32	+0.6
5,952,392	-		PFR28_05206	0.32	-0.6
5,952,392	-		PFR28_05206	0.32	-0.2
5,952,392	-		PFR28_05206	0.32	-0.0
5,952,392	-		PFR28_05206	0.32	-1.4
5,952,416	-		PFR28_05206	0.35	-1.3
5,952,416	-		PFR28_05206	0.35	-1.5
5,952,499	+		PFR28_05206	0.47	-0.2
5,952,499	+		PFR28_05206	0.47	-2.6
5,952,499	+		PFR28_05206	0.47	-1.2
5,952,500	-		PFR28_05206	0.47	-1.0
5,952,500	-		PFR28_05206	0.47	-0.4
5,952,508	+		PFR28_05206	0.48	-1.3
5,952,508	+		PFR28_05206	0.48	-0.3
5,952,508	+		PFR28_05206	0.48	-0.8
5,952,508	+		PFR28_05206	0.48	-1.2
5,952,508	+		PFR28_05206	0.48	-0.3
5,952,508	+		PFR28_05206	0.48	+0.3
5,952,508	+		PFR28_05206	0.48	+0.5
5,952,508	+		PFR28_05206	0.48	-2.4
5,952,509	-		PFR28_05206	0.48	-0.8
5,952,509	-		PFR28_05206	0.48	+0.1
5,952,509	-		PFR28_05206	0.48	-1.5
5,952,509	-		PFR28_05206	0.48	-0.3
5,952,509	-		PFR28_05206	0.48	-1.6
5,952,509	-		PFR28_05206	0.48	-1.8
5,952,514	+		PFR28_05206	0.49	-0.1
5,952,514	+		PFR28_05206	0.49	-0.3
5,952,514	+		PFR28_05206	0.49	+1.1
5,952,514	+		PFR28_05206	0.49	-3.8
5,952,514	+		PFR28_05206	0.49	-1.1
5,952,514	+		PFR28_05206	0.49	+0.3
5,952,514	+		PFR28_05206	0.49	-0.5
5,952,514	+		PFR28_05206	0.49	-0.9
5,952,514	+		PFR28_05206	0.49	+1.0
5,952,514	+		PFR28_05206	0.49	-0.9
5,952,514	+		PFR28_05206	0.49	-0.6
5,952,514	+		PFR28_05206	0.49	+1.0
5,952,514	+		PFR28_05206	0.49	-0.7
5,952,515	-		PFR28_05206	0.49	-1.4
5,952,515	-		PFR28_05206	0.49	-1.5
5,952,515	-		PFR28_05206	0.49	+1.3
5,952,515	-		PFR28_05206	0.49	-0.7
5,952,515	-		PFR28_05206	0.49	-2.6
5,952,515	-		PFR28_05206	0.49	-1.8
5,952,515	-		PFR28_05206	0.49	-0.7
5,952,515	-		PFR28_05206	0.49	+0.2
5,952,515	-		PFR28_05206	0.49	-1.5
5,952,515	-		PFR28_05206	0.49	-0.6
5,952,541	+		PFR28_05206	0.52	-0.9
5,952,541	+		PFR28_05206	0.52	+0.6
5,952,614	-		PFR28_05206	0.62	-3.5
5,952,614	-		PFR28_05206	0.62	-1.5
5,952,776	-		PFR28_05206	0.84	-0.4
5,952,776	-		PFR28_05206	0.84	-0.3
5,952,789	+		PFR28_05206	0.86	-0.7
5,952,790	-		PFR28_05206	0.86	+0.3
5,952,847	+				-0.3
5,952,847	+				-1.0
5,952,848	-				-1.9
5,952,848	-				-0.9
5,953,020	+				-1.6
5,953,020	+				-2.6
5,953,021	-				-0.6
5,953,054	-				-1.0
5,953,054	-				-0.2
5,953,054	-				+0.4
5,953,503	+		PFR28_05207	0.36	-1.5
5,953,707	-		PFR28_05207	0.48	-1.5
5,953,920	+		PFR28_05207	0.61	+0.3
5,953,929	+		PFR28_05207	0.61	-0.5
5,953,929	+		PFR28_05207	0.61	-1.9
5,953,929	+		PFR28_05207	0.61	-1.6
5,953,929	+		PFR28_05207	0.61	+0.5
5,953,929	+		PFR28_05207	0.61	-1.3
5,953,929	+		PFR28_05207	0.61	-1.1
5,953,930	-		PFR28_05207	0.61	-0.3
5,953,930	-		PFR28_05207	0.61	-1.7
5,953,930	-		PFR28_05207	0.61	-0.8
5,953,930	-		PFR28_05207	0.61	-1.0
5,953,930	-		PFR28_05207	0.61	-0.3
5,953,930	-		PFR28_05207	0.61	-1.0
5,954,313	+		PFR28_05207	0.84	-1.2
5,954,313	+		PFR28_05207	0.84	-0.0
5,954,313	+		PFR28_05207	0.84	+1.0
5,954,313	+		PFR28_05207	0.84	-0.9
5,954,313	+		PFR28_05207	0.84	-0.7
5,954,313	+		PFR28_05207	0.84	-1.7
5,954,313	+		PFR28_05207	0.84	-0.3
5,954,313	+		PFR28_05207	0.84	-1.9
5,954,314	-		PFR28_05207	0.84	-0.3
5,954,314	-		PFR28_05207	0.84	-1.1
5,954,314	-		PFR28_05207	0.84	-0.7
5,954,314	-		PFR28_05207	0.84	+0.3
5,954,314	-		PFR28_05207	0.84	+1.3
5,954,314	-		PFR28_05207	0.84	-1.3
5,954,314	-		PFR28_05207	0.84	-1.7
5,954,314	-		PFR28_05207	0.84	-1.1
5,954,314	-		PFR28_05207	0.84	-1.7
5,954,314	-		PFR28_05207	0.84	-1.3
5,954,551	+				-1.5
5,954,551	+				-0.4
5,954,551	+				+1.1
5,954,551	+				-0.4
5,954,551	+				-0.0
5,954,552	-				-1.7
5,954,552	-				-0.6
5,954,552	-				-1.3
5,954,552	-				-1.6
5,954,552	-				-3.1
5,954,553	+				-1.1
5,954,553	+				-0.4
5,954,553	+				+0.7
5,954,553	+				-0.1
5,954,553	+				+0.8
5,954,553	+				+0.2
5,954,553	+				-0.1
5,954,553	+				-1.8
5,954,553	+				-0.8
5,954,553	+				-2.8
5,954,553	+				+0.9
5,954,553	+				-1.0
5,954,553	+				-0.5
5,954,553	+				-2.5
5,954,554	-				-2.6
5,954,554	-				+0.3
5,954,554	-				+1.0
5,954,554	-				+0.1
5,954,554	-				-1.6
5,954,554	-				-1.5
5,954,554	-				-1.3
5,954,554	-				+0.3
5,954,554	-				-0.6
5,954,554	-				-1.0
5,954,555	+				-2.7
5,954,555	+				-0.0
5,954,555	+				-1.0
5,954,555	+				-1.5
5,954,555	+				-2.0
5,954,555	+				-0.7
5,954,555	+				+0.3
5,954,556	-				-0.1
5,954,556	-				-1.3
5,954,556	-				-0.9
5,954,556	-				-2.2
5,954,556	-				-0.1
5,954,556	-				-1.9
5,954,556	-				-1.5
5,954,556	-				-0.9
5,954,556	-				-0.4
5,954,685	+				+0.0
5,954,685	+				+0.1
5,954,686	-				-1.3
5,954,704	-				+2.1
5,954,790	-				+0.9
5,955,007	+				-0.1
5,955,007	+				-0.3
5,955,007	+				+0.3
5,955,008	-				+0.2
5,955,008	-				+0.1
5,955,008	-				+0.4
5,955,018	+				+0.5
5,955,519	+				+0.2
5,955,520	-				-1.7
5,955,587	-		PFR28_05208	0.10	+0.3