Strain Fitness in Pseudomonas sp. RS175 around PFR28_05201

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
5,947,082	+		PFR28_05200	0.48	-0.6
5,947,082	+		PFR28_05200	0.48	+0.1
5,947,082	+		PFR28_05200	0.48	+0.8
5,947,082	+		PFR28_05200	0.48	-0.1
5,947,082	+		PFR28_05200	0.48	+0.6
5,947,082	+		PFR28_05200	0.48	-0.6
5,947,667	+				+0.3
5,947,667	+				+0.3
5,947,668	-				-0.7
5,947,668	-				-1.5
5,947,668	-				-0.3
5,947,901	+		PFR28_05201	0.21	-0.0
5,948,411	-		PFR28_05201	0.63	-2.0
5,948,619	+		PFR28_05201	0.80	-0.7
5,948,619	+		PFR28_05201	0.80	-1.5
5,948,619	+		PFR28_05201	0.80	-1.6
5,948,620	-		PFR28_05201	0.80	-1.9
5,948,620	-		PFR28_05201	0.80	-0.3
5,948,927	-				-0.2
5,948,927	-				-1.2
5,948,927	-				-0.5
5,948,981	-				-0.8
5,948,992	+				-0.1
5,948,992	+				-1.2
5,948,992	+				-0.1
5,948,992	+				-1.0
5,948,992	+				-1.1
5,948,993	-				+0.6
5,948,993	-				+0.8
5,948,993	-				+1.0
5,948,993	-				+0.1
5,948,993	-				-0.7
5,948,993	-				+0.1
5,948,993	-				+2.3
5,948,993	-				-0.6
5,948,993	-				-0.2
5,948,993	-				-1.2
5,949,002	+				+0.7
5,949,003	-				-0.2
5,949,003	-				+0.4
5,949,003	-				-0.9
5,949,003	-				+0.1
5,949,003	-				-0.8
5,949,004	+				-1.3
5,949,004	+				+0.2
5,949,004	+				-0.6
5,949,004	+				+1.3
5,949,004	+				-0.1
5,949,004	+				+1.3
5,949,005	-				-0.7
5,949,005	-				+0.4
5,949,005	-				-0.2
5,949,005	-				-0.3
5,949,005	-				+0.1
5,949,005	-				-0.7
5,949,005	-				+0.6
5,949,010	+				+0.4
5,949,010	+				-0.0
5,949,010	+				+1.3
5,949,011	-				+0.6
5,949,011	-				+0.4
5,949,011	-				+0.3
5,949,011	-				+0.1
5,949,011	-				+0.2
5,949,011	-				+1.3
5,949,011	-				-0.4
5,949,012	+				-0.0
5,949,012	+				+0.3
5,949,012	+				-0.1
5,949,012	+				-0.2
5,949,012	+				-0.3
5,949,012	+				-1.9
5,949,012	+				-1.2
5,949,012	+				-0.3
5,949,012	+				-0.2
5,949,012	+				+0.2
5,949,012	+				+0.3
5,949,012	+				-1.7
5,949,012	+				+0.5
5,949,012	+				-0.5
5,949,013	-				+0.0
5,949,013	-				+0.1
5,949,013	-				-0.4
5,949,013	-				+0.6
5,949,013	-				-0.7
5,949,013	-				+0.2
5,949,013	-				+0.5
5,949,013	-				+0.7
5,949,013	-				-0.2
5,949,013	-				+0.1
5,949,013	-				-0.2
5,949,013	-				+0.1
5,949,013	-				-0.1
5,949,013	-				+0.4
5,949,052	-				-0.0
5,949,052	-				-1.6
5,949,154	+		PFR28_05202	0.19	+0.3
5,949,154	+		PFR28_05202	0.19	+0.1
5,949,174	+		PFR28_05202	0.21	-0.8
5,949,175	-		PFR28_05202	0.21	-0.2
5,949,175	-		PFR28_05202	0.21	-1.1
5,949,204	-		PFR28_05202	0.25	+0.4
5,949,205	+		PFR28_05202	0.25	+0.2
5,949,205	+		PFR28_05202	0.25	+0.0
5,949,206	-		PFR28_05202	0.25	+0.7
5,949,206	-		PFR28_05202	0.25	-1.5
5,949,206	-		PFR28_05202	0.25	+0.6
5,949,206	-		PFR28_05202	0.25	+0.1
5,949,206	-		PFR28_05202	0.25	-0.6
5,949,206	-		PFR28_05202	0.25	-1.5
5,949,209	+		PFR28_05202	0.25	-0.2
5,949,209	+		PFR28_05202	0.25	-0.7
5,949,209	+		PFR28_05202	0.25	-0.6
5,949,259	+		PFR28_05202	0.31	-0.5
5,949,260	-		PFR28_05202	0.31	-0.6
5,949,498	-		PFR28_05202	0.57	-0.1
5,949,498	-		PFR28_05202	0.57	+0.3
5,949,541	+		PFR28_05202	0.62	-0.3
5,949,541	+		PFR28_05202	0.62	+0.1
5,949,541	+		PFR28_05202	0.62	-0.2
5,949,541	+		PFR28_05202	0.62	-0.5
5,949,541	+		PFR28_05202	0.62	+0.1
5,949,541	+		PFR28_05202	0.62	-0.5
5,949,542	-		PFR28_05202	0.62	-0.2
5,949,542	-		PFR28_05202	0.62	-0.6
5,949,603	-		PFR28_05202	0.68	+0.3
5,949,603	-		PFR28_05202	0.68	+0.9
5,949,679	+		PFR28_05202	0.77	+0.0
5,949,679	+		PFR28_05202	0.77	+0.2
5,949,679	+		PFR28_05202	0.77	+0.1
5,949,679	+		PFR28_05202	0.77	-0.5
5,949,680	-		PFR28_05202	0.77	-0.6
5,949,680	-		PFR28_05202	0.77	+0.5
5,949,687	+		PFR28_05202	0.78	-1.0
5,949,687	+		PFR28_05202	0.78	+0.2
5,949,687	+		PFR28_05202	0.78	+1.4
5,949,687	+		PFR28_05202	0.78	+0.0
5,949,688	-		PFR28_05202	0.78	+0.0
5,949,688	-		PFR28_05202	0.78	+0.3
5,949,688	-		PFR28_05202	0.78	-1.1
5,949,688	-		PFR28_05202	0.78	-0.2
5,949,688	-		PFR28_05202	0.78	-0.5
5,949,688	-		PFR28_05202	0.78	-0.7
5,949,688	-		PFR28_05202	0.78	+0.3
5,949,688	-		PFR28_05202	0.78	+0.0
5,949,688	-		PFR28_05202	0.78	-0.8
5,949,688	-		PFR28_05202	0.78	-0.4
5,949,691	+		PFR28_05202	0.78	+0.6
5,949,691	+		PFR28_05202	0.78	+0.5
5,949,691	+		PFR28_05202	0.78	-1.0
5,949,691	+		PFR28_05202	0.78	-0.7
5,949,691	+		PFR28_05202	0.78	+0.1
5,949,691	+		PFR28_05202	0.78	-1.0
5,949,691	+		PFR28_05202	0.78	-0.4
5,949,691	+		PFR28_05202	0.78	-0.1
5,949,691	+		PFR28_05202	0.78	-0.6
5,949,691	+		PFR28_05202	0.78	-0.2
5,949,691	+		PFR28_05202	0.78	-0.1
5,949,691	+		PFR28_05202	0.78	-0.2
5,949,691	+		PFR28_05202	0.78	+0.3
5,949,692	-		PFR28_05202	0.78	-1.0
5,949,692	-		PFR28_05202	0.78	+0.6
5,949,692	-		PFR28_05202	0.78	+1.3
5,949,692	-		PFR28_05202	0.78	+0.1
5,949,692	-		PFR28_05202	0.78	-0.8
5,949,692	-		PFR28_05202	0.78	-0.6
5,949,692	-		PFR28_05202	0.78	+1.1
5,949,692	-		PFR28_05202	0.78	-0.4
5,949,692	-		PFR28_05202	0.78	-0.2
5,949,692	-		PFR28_05202	0.78	+0.8
5,949,692	-		PFR28_05202	0.78	-0.5
5,949,692	-		PFR28_05202	0.78	-0.5
5,949,692	-		PFR28_05202	0.78	-0.7
5,949,692	-		PFR28_05202	0.78	+0.1
5,949,692	-		PFR28_05202	0.78	+0.1
5,949,692	-		PFR28_05202	0.78	-0.2
5,949,692	-		PFR28_05202	0.78	+0.6
5,949,692	-		PFR28_05202	0.78	-0.4
5,949,692	-		PFR28_05202	0.78	+1.3
5,949,692	-		PFR28_05202	0.78	-0.0
5,949,736	+		PFR28_05202	0.83	-1.5
5,949,736	+		PFR28_05202	0.83	-1.2
5,949,737	-		PFR28_05202	0.83	-0.3
5,949,832	+				-0.6
5,949,859	+				-0.2
5,949,859	+				-0.7
5,949,859	+				+0.1
5,949,859	+				-0.2
5,949,859	+				-0.2
5,949,859	+				-0.4
5,949,859	+				+0.7
5,949,860	-				+1.0
5,949,860	-				-0.1
5,949,860	-				-0.1