Strain Fitness in Pseudomonas sp. RS175 around PFR28_05015

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
5,720,016	-		PFR28_05014	0.81	+0.2
5,720,047	-		PFR28_05014	0.83	+1.0
5,720,070	+		PFR28_05014	0.84	+0.0
5,720,070	+		PFR28_05014	0.84	-0.2
5,720,070	+		PFR28_05014	0.84	+0.3
5,720,070	+		PFR28_05014	0.84	+0.5
5,720,070	+		PFR28_05014	0.84	+1.0
5,720,070	+		PFR28_05014	0.84	-0.7
5,720,070	+		PFR28_05014	0.84	+0.3
5,720,070	+		PFR28_05014	0.84	-0.6
5,720,070	+		PFR28_05014	0.84	-0.0
5,720,070	+		PFR28_05014	0.84	+0.5
5,720,070	+		PFR28_05014	0.84	-0.0
5,720,070	+		PFR28_05014	0.84	+0.6
5,720,070	-		PFR28_05014	0.84	+0.2
5,720,071	-		PFR28_05014	0.84	-0.7
5,720,071	-		PFR28_05014	0.84	+0.7
5,720,071	-		PFR28_05014	0.84	+0.6
5,720,071	-		PFR28_05014	0.84	-0.3
5,720,071	-		PFR28_05014	0.84	-0.3
5,720,071	-		PFR28_05014	0.84	+1.0
5,720,071	-		PFR28_05014	0.84	+1.3
5,720,071	-		PFR28_05014	0.84	+0.8
5,720,071	-		PFR28_05014	0.84	-0.4
5,720,090	+		PFR28_05014	0.85	+1.8
5,720,148	+		PFR28_05014	0.89	+0.3
5,720,148	+		PFR28_05014	0.89	-0.3
5,720,148	+		PFR28_05014	0.89	-0.1
5,720,148	+		PFR28_05014	0.89	-0.7
5,720,148	+		PFR28_05014	0.89	+0.0
5,720,149	-		PFR28_05014	0.89	+0.4
5,720,149	-		PFR28_05014	0.89	-1.2
5,720,181	+				+0.6
5,720,181	+				-0.4
5,720,181	+				-0.3
5,720,181	+				+0.9
5,720,181	+				+0.1
5,720,181	+				-1.0
5,720,181	+				+0.1
5,720,181	+				-1.2
5,720,181	+				-1.1
5,720,181	+				-0.3
5,720,181	+				+0.2
5,720,181	+				+0.4
5,720,182	-				+0.6
5,720,182	-				-0.9
5,720,182	-				+0.4
5,720,182	-				+0.2
5,720,182	-				+0.5
5,720,182	-				-0.1
5,720,182	-				+0.2
5,720,182	-				+0.1
5,720,182	-				-0.3
5,720,193	+				+0.7
5,720,194	-				+0.3
5,720,194	-				+0.0
5,720,194	-				-0.5
5,720,264	+				-1.0
5,720,264	+				+0.9
5,720,425	+				+0.6
5,720,477	+				-0.8
5,720,477	+				+0.5
5,720,477	+				+0.6
5,720,478	-				-0.8
5,720,480	-				-0.1
5,720,557	+				-0.2
5,720,557	+				-0.6
5,720,557	+				-0.2
5,720,557	+				-0.3
5,720,557	+				-0.3
5,720,557	+				-0.1
5,720,557	+				-1.2
5,720,558	-				-2.6
5,720,558	-				-2.2
5,720,558	-				-1.4
5,720,558	-				-2.7
5,720,558	-				-4.1
5,720,558	-				-3.0
5,720,558	-				-2.0
5,720,558	-				-3.3
5,720,558	-				-2.1
5,720,558	-				-4.0
5,720,558	-				-2.7
5,720,558	-				-1.5
5,720,558	-				-3.4
5,720,558	-				-3.2
5,720,558	-				-0.3
5,720,558	-				-1.9
5,720,558	-				-2.8
5,720,687	+				-2.8
5,720,688	-				-2.4
5,720,688	-				-3.1
5,720,688	-				-1.0
5,720,710	+				-2.9
5,720,710	+				-3.0
5,720,711	-				-3.8
5,720,711	-				-3.4
5,720,737	+				-2.5
5,720,737	+				-2.4
5,720,737	+				-3.5
5,720,752	+				-4.1
5,720,758	+				-4.5
5,720,759	-				-3.2
5,720,759	-				-4.3
5,721,203	+		PFR28_05015	0.12	-4.6
5,721,203	+		PFR28_05015	0.12	-2.4
5,721,203	+		PFR28_05015	0.12	-3.4
5,721,203	+		PFR28_05015	0.12	-1.3
5,721,203	+		PFR28_05015	0.12	-4.1
5,721,203	+		PFR28_05015	0.12	-3.7
5,721,203	+		PFR28_05015	0.12	-4.3
5,721,203	+		PFR28_05015	0.12	-1.5
5,721,203	+		PFR28_05015	0.12	-2.5
5,721,203	+		PFR28_05015	0.12	-2.6
5,721,203	+		PFR28_05015	0.12	-3.5
5,721,203	+		PFR28_05015	0.12	-3.0
5,721,203	+		PFR28_05015	0.12	-2.0
5,721,203	+		PFR28_05015	0.12	-4.0
5,721,203	+		PFR28_05015	0.12	-3.6
5,721,204	-		PFR28_05015	0.12	-2.6
5,721,204	-		PFR28_05015	0.12	-4.8
5,721,204	-		PFR28_05015	0.12	-4.5
5,721,204	-		PFR28_05015	0.12	-2.7
5,721,204	-		PFR28_05015	0.12	-3.9
5,721,204	-		PFR28_05015	0.12	-3.5
5,721,204	-		PFR28_05015	0.12	-4.0
5,721,204	-		PFR28_05015	0.12	-4.6
5,721,236	+		PFR28_05015	0.13	-4.7
5,721,236	+		PFR28_05015	0.13	-2.0
5,721,236	+		PFR28_05015	0.13	-3.0
5,721,236	+		PFR28_05015	0.13	-3.2
5,721,236	+		PFR28_05015	0.13	-3.7
5,721,236	+		PFR28_05015	0.13	-4.4
5,721,236	+		PFR28_05015	0.13	-3.6
5,721,236	+		PFR28_05015	0.13	-3.1
5,721,236	+		PFR28_05015	0.13	-3.2
5,721,236	+		PFR28_05015	0.13	-1.5
5,721,236	+		PFR28_05015	0.13	-1.5
5,721,237	-		PFR28_05015	0.13	-2.4
5,721,237	-		PFR28_05015	0.13	-2.0
5,721,237	-		PFR28_05015	0.13	-3.6
5,721,237	-		PFR28_05015	0.13	-1.5
5,721,238	+		PFR28_05015	0.13	-4.7
5,721,238	+		PFR28_05015	0.13	-4.1
5,721,239	-		PFR28_05015	0.13	-4.8
5,721,239	-		PFR28_05015	0.13	-4.0
5,721,239	-		PFR28_05015	0.13	-3.6
5,721,239	-		PFR28_05015	0.13	-2.4
5,721,239	-		PFR28_05015	0.13	-2.3
5,721,332	+		PFR28_05015	0.15	-2.4
5,721,563	-		PFR28_05015	0.20	-3.7
5,721,582	+		PFR28_05015	0.20	-1.8
5,721,583	-		PFR28_05015	0.20	-2.5
5,721,583	-		PFR28_05015	0.20	-3.7
5,721,583	-		PFR28_05015	0.20	-2.0
5,721,647	+		PFR28_05015	0.22	-3.7
5,721,647	+		PFR28_05015	0.22	-3.7
5,721,647	+		PFR28_05015	0.22	-3.3
5,721,647	+		PFR28_05015	0.22	-2.2
5,721,647	+		PFR28_05015	0.22	-2.8
5,721,648	-		PFR28_05015	0.22	-2.4
5,721,648	-		PFR28_05015	0.22	-3.2
5,721,648	-		PFR28_05015	0.22	-2.7
5,721,648	-		PFR28_05015	0.22	-3.3
5,721,653	+		PFR28_05015	0.22	-4.1
5,721,653	+		PFR28_05015	0.22	-2.3
5,721,653	+		PFR28_05015	0.22	-4.3
5,721,654	-		PFR28_05015	0.22	-2.9
5,721,654	-		PFR28_05015	0.22	-3.9
5,721,654	-		PFR28_05015	0.22	-3.5
5,721,654	-		PFR28_05015	0.22	-2.6
5,721,819	-		PFR28_05015	0.26	-2.7
5,721,819	-		PFR28_05015	0.26	-3.0
5,721,944	+		PFR28_05015	0.29	-2.4
5,721,944	+		PFR28_05015	0.29	-1.3
5,721,944	+		PFR28_05015	0.29	-3.1
5,721,944	+		PFR28_05015	0.29	-1.5
5,721,944	+		PFR28_05015	0.29	-1.3
5,721,944	+		PFR28_05015	0.29	-4.4
5,721,944	+		PFR28_05015	0.29	-2.9
5,721,944	+		PFR28_05015	0.29	-3.3
5,721,945	-		PFR28_05015	0.29	-2.5
5,721,945	-		PFR28_05015	0.29	-2.9
5,721,945	-		PFR28_05015	0.29	-3.0
5,721,945	-		PFR28_05015	0.29	-3.3
5,721,945	-		PFR28_05015	0.29	-2.7
5,721,945	-		PFR28_05015	0.29	-3.4
5,721,945	-		PFR28_05015	0.29	-1.5
5,721,945	-		PFR28_05015	0.29	-4.3
5,722,019	+		PFR28_05015	0.30	-4.0
5,722,019	+		PFR28_05015	0.30	-2.2
5,722,019	+		PFR28_05015	0.30	-1.0
5,722,019	+		PFR28_05015	0.30	-4.9
5,722,020	-		PFR28_05015	0.30	-3.4
5,722,020	-		PFR28_05015	0.30	-3.3
5,722,020	-		PFR28_05015	0.30	-2.9
5,722,020	-		PFR28_05015	0.30	-4.2
5,722,043	+		PFR28_05015	0.31	-2.2
5,722,043	+		PFR28_05015	0.31	-2.6
5,722,043	+		PFR28_05015	0.31	-3.8
5,722,043	+		PFR28_05015	0.31	-4.3
5,722,043	+		PFR28_05015	0.31	-4.5
5,722,043	+		PFR28_05015	0.31	-4.8
5,722,043	+		PFR28_05015	0.31	-4.8
5,722,043	+		PFR28_05015	0.31	-3.0
5,722,043	+		PFR28_05015	0.31	-2.7
5,722,043	+		PFR28_05015	0.31	-2.2
5,722,044	-		PFR28_05015	0.31	-4.1
5,722,044	-		PFR28_05015	0.31	-2.6
5,722,056	-		PFR28_05015	0.31	-2.6
5,722,056	-		PFR28_05015	0.31	-4.2
5,722,056	-		PFR28_05015	0.31	-4.1
5,722,112	+		PFR28_05015	0.32	-4.6
5,722,113	-		PFR28_05015	0.32	-3.7
5,722,182	-		PFR28_05015	0.34	-2.3
5,722,187	+		PFR28_05015	0.34	-2.0
5,722,288	+		PFR28_05015	0.36	-4.4
5,722,288	+		PFR28_05015	0.36	-3.6
5,722,418	+		PFR28_05015	0.39	-3.2
5,722,418	+		PFR28_05015	0.39	-3.9
5,722,419	-		PFR28_05015	0.39	-3.4
5,722,706	+		PFR28_05015	0.46	-2.0
5,722,707	-		PFR28_05015	0.46	-3.9
5,722,707	-		PFR28_05015	0.46	-1.0
5,722,732	+		PFR28_05015	0.46	-2.8
5,722,757	+		PFR28_05015	0.47	-2.2
5,722,757	+		PFR28_05015	0.47	-2.2
5,722,758	-		PFR28_05015	0.47	-1.9
5,722,764	+		PFR28_05015	0.47	-2.3
5,722,764	+		PFR28_05015	0.47	-4.9
5,722,765	-		PFR28_05015	0.47	-2.0
5,722,765	-		PFR28_05015	0.47	-4.1
5,722,765	-		PFR28_05015	0.47	-2.2
5,722,775	+		PFR28_05015	0.47	-2.4
5,722,776	-		PFR28_05015	0.47	-4.5
5,723,054	+		PFR28_05015	0.54	-3.2
5,723,054	+		PFR28_05015	0.54	-3.6
5,723,054	+		PFR28_05015	0.54	-5.4
5,723,054	+		PFR28_05015	0.54	-0.7
5,723,054	+		PFR28_05015	0.54	-2.2
5,723,054	+		PFR28_05015	0.54	-4.1
5,723,054	+		PFR28_05015	0.54	-3.8
5,723,054	+		PFR28_05015	0.54	-4.5
5,723,055	-		PFR28_05015	0.54	-4.3
5,723,055	-		PFR28_05015	0.54	-4.6
5,723,055	-		PFR28_05015	0.54	-3.4
5,723,055	-		PFR28_05015	0.54	-3.2
5,723,055	-		PFR28_05015	0.54	-3.3
5,723,055	-		PFR28_05015	0.54	-4.6
5,723,055	-		PFR28_05015	0.54	-3.2
5,723,055	-		PFR28_05015	0.54	-4.3
5,723,074	+		PFR28_05015	0.54	-1.9
5,723,123	+		PFR28_05015	0.55	-3.6
5,723,123	+		PFR28_05015	0.55	-3.7
5,723,123	+		PFR28_05015	0.55	-4.7
5,723,123	+		PFR28_05015	0.55	-1.0
5,723,123	+		PFR28_05015	0.55	-1.6
5,723,123	+		PFR28_05015	0.55	-3.8
5,723,123	+		PFR28_05015	0.55	-3.0
5,723,124	-		PFR28_05015	0.55	-5.2
5,723,124	-		PFR28_05015	0.55	-4.7
5,723,124	-		PFR28_05015	0.55	-3.5
5,723,124	-		PFR28_05015	0.55	-3.4
5,723,257	+		PFR28_05015	0.58	-2.6
5,723,432	+		PFR28_05015	0.62	-3.4
5,723,432	+		PFR28_05015	0.62	-2.8
5,723,432	+		PFR28_05015	0.62	-5.0
5,723,433	-		PFR28_05015	0.62	-1.7
5,723,451	+		PFR28_05015	0.62	-2.1
5,723,452	-		PFR28_05015	0.62	-3.7
5,723,452	-		PFR28_05015	0.62	-1.8
5,723,543	+		PFR28_05015	0.65	-4.1
5,723,543	+		PFR28_05015	0.65	-3.7
5,723,544	-		PFR28_05015	0.65	-4.7
5,723,594	+		PFR28_05015	0.66	-3.9
5,723,595	-		PFR28_05015	0.66	-2.9
5,723,595	-		PFR28_05015	0.66	-5.6
5,723,720	+		PFR28_05015	0.69	-3.3
5,723,720	+		PFR28_05015	0.69	-3.7
5,723,720	+		PFR28_05015	0.69	-4.0
5,723,721	-		PFR28_05015	0.69	-3.8
5,723,721	-		PFR28_05015	0.69	-5.1
5,723,721	-		PFR28_05015	0.69	-5.3
5,723,789	+		PFR28_05015	0.70	-3.2
5,723,789	+		PFR28_05015	0.70	-4.5
5,723,789	+		PFR28_05015	0.70	-3.0
5,723,789	+		PFR28_05015	0.70	-4.4
5,723,789	+		PFR28_05015	0.70	-4.6
5,723,789	+		PFR28_05015	0.70	-3.7
5,723,790	-		PFR28_05015	0.70	-4.1
5,723,790	-		PFR28_05015	0.70	-2.5
5,723,981	+		PFR28_05015	0.74	-5.2
5,723,981	+		PFR28_05015	0.74	-4.2
5,723,982	-		PFR28_05015	0.74	-5.2
5,723,982	-		PFR28_05015	0.74	-0.7
5,723,982	-		PFR28_05015	0.74	-3.8
5,723,982	-		PFR28_05015	0.74	-2.3
5,724,056	+		PFR28_05015	0.76	-3.4
5,724,056	+		PFR28_05015	0.76	-3.6
5,724,056	+		PFR28_05015	0.76	-1.6
5,724,056	+		PFR28_05015	0.76	-4.1
5,724,056	+		PFR28_05015	0.76	-3.6
5,724,056	+		PFR28_05015	0.76	-2.6
5,724,056	+		PFR28_05015	0.76	-4.1
5,724,056	+		PFR28_05015	0.76	-2.0
5,724,057	-		PFR28_05015	0.76	-2.3
5,724,057	-		PFR28_05015	0.76	-3.4
5,724,057	-		PFR28_05015	0.76	-1.0
5,724,057	-		PFR28_05015	0.76	+0.3
5,724,096	-		PFR28_05015	0.77	-2.4
5,724,096	-		PFR28_05015	0.77	-1.7
5,724,096	-		PFR28_05015	0.77	-2.2
5,724,096	-		PFR28_05015	0.77	-4.4
5,724,096	-		PFR28_05015	0.77	-5.1
5,724,096	-		PFR28_05015	0.77	-3.8
5,724,096	-		PFR28_05015	0.77	-3.4
5,724,096	-		PFR28_05015	0.77	-3.1
5,724,539	+		PFR28_05015	0.87	-3.2
5,724,539	+		PFR28_05015	0.87	-4.0
5,724,539	+		PFR28_05015	0.87	-3.0
5,724,539	+		PFR28_05015	0.87	-4.2
5,724,540	-		PFR28_05015	0.87	-3.1
5,724,540	-		PFR28_05015	0.87	-1.5
5,724,540	-		PFR28_05015	0.87	-2.6
5,724,540	-		PFR28_05015	0.87	-1.0
5,724,540	-		PFR28_05015	0.87	-3.7
5,724,540	-		PFR28_05015	0.87	-4.0
5,724,564	-		PFR28_05015	0.87	-0.7
5,724,564	-		PFR28_05015	0.87	-1.3
5,724,577	+		PFR28_05015	0.88	-2.9
5,724,578	-		PFR28_05015	0.88	-3.9
5,724,779	+				-2.4
5,724,779	+				-3.7
5,724,779	+				-3.7
5,724,779	+				-4.4
5,724,779	+				-1.9
5,724,780	-				-3.6
5,724,780	-				-4.0
5,724,857	+				-2.2
5,724,857	+				-2.9
5,724,858	-				-3.8
5,724,858	-				-4.1
5,724,858	-				-3.3
5,724,980	+				-3.5
5,724,980	+				-3.8
5,724,980	+				-2.9
5,724,980	+				-3.2
5,724,980	+				-2.4
5,724,980	+				+0.3
5,724,980	+				-3.6
5,724,981	-				-3.0
5,724,981	-				-2.6
5,724,981	-				-3.7
5,724,981	-				-4.3
5,724,981	-				-1.6
5,724,981	-				-3.0
5,725,037	+				-2.0
5,725,037	+				-2.9
5,725,037	+				-3.4
5,725,037	+				-4.3
5,725,038	-				-3.1
5,725,038	-				-5.1
5,725,038	-				-3.5
5,725,038	-				-4.3
5,725,149	+				-2.2
5,725,149	+				-3.4
5,725,149	+				-3.1
5,725,150	-				-3.1
5,725,150	-				-2.3
5,725,172	-				-1.5
5,725,257	-				-3.0
5,725,323	-		PFR28_05016	0.12	-4.0
5,725,535	+		PFR28_05016	0.27	-2.9
5,725,535	+		PFR28_05016	0.27	-1.8
5,725,535	+		PFR28_05016	0.27	-4.2
5,725,535	+		PFR28_05016	0.27	-2.2
5,725,535	+		PFR28_05016	0.27	-3.5
5,725,535	+		PFR28_05016	0.27	-4.8
5,725,535	+		PFR28_05016	0.27	-1.0
5,725,535	+		PFR28_05016	0.27	-3.4
5,725,536	-		PFR28_05016	0.27	-4.0
5,725,536	-		PFR28_05016	0.27	-3.5
5,725,536	-		PFR28_05016	0.27	-2.9
5,725,536	-		PFR28_05016	0.27	-4.2
5,725,536	-		PFR28_05016	0.27	-2.8
5,725,536	-		PFR28_05016	0.27	-1.9
5,725,683	+		PFR28_05016	0.37	-5.4
5,725,856	+		PFR28_05016	0.49	-4.8
5,725,856	+		PFR28_05016	0.49	-2.4
5,725,856	+		PFR28_05016	0.49	-2.6
5,725,856	+		PFR28_05016	0.49	-2.4
5,725,886	+		PFR28_05016	0.52	-4.1
5,725,886	+		PFR28_05016	0.52	-1.9
5,725,886	+		PFR28_05016	0.52	-4.1
5,725,886	+		PFR28_05016	0.52	-3.1
5,725,886	+		PFR28_05016	0.52	-2.5
5,725,886	+		PFR28_05016	0.52	-2.3
5,725,886	+		PFR28_05016	0.52	-2.6
5,725,886	+		PFR28_05016	0.52	-3.2
5,725,886	+		PFR28_05016	0.52	-4.4
5,725,886	+		PFR28_05016	0.52	-3.7
5,725,886	+		PFR28_05016	0.52	-1.7
5,725,886	+		PFR28_05016	0.52	-3.9
5,725,886	+		PFR28_05016	0.52	-4.7
5,725,886	+		PFR28_05016	0.52	-1.0
5,725,886	+		PFR28_05016	0.52	-3.6
5,725,887	-		PFR28_05016	0.52	-2.4
5,725,887	-		PFR28_05016	0.52	-3.2
5,725,887	-		PFR28_05016	0.52	-3.7
5,725,887	-		PFR28_05016	0.52	-3.5
5,725,887	-		PFR28_05016	0.52	-2.6
5,725,887	-		PFR28_05016	0.52	-1.3
5,725,887	-		PFR28_05016	0.52	-3.3
5,725,887	-		PFR28_05016	0.52	-2.4
5,725,887	-		PFR28_05016	0.52	-4.0
5,725,892	+		PFR28_05016	0.52	-1.8
5,725,892	+		PFR28_05016	0.52	-3.8
5,725,892	+		PFR28_05016	0.52	-3.2
5,725,892	+		PFR28_05016	0.52	-1.5
5,725,892	+		PFR28_05016	0.52	-2.5
5,725,892	+		PFR28_05016	0.52	-2.4
5,725,892	+		PFR28_05016	0.52	-4.2
5,725,892	+		PFR28_05016	0.52	-5.0
5,725,892	+		PFR28_05016	0.52	-2.5
5,725,892	+		PFR28_05016	0.52	-5.7
5,725,893	-		PFR28_05016	0.52	-3.8
5,725,893	-		PFR28_05016	0.52	-4.3
5,725,893	-		PFR28_05016	0.52	-3.0
5,725,893	-		PFR28_05016	0.52	-2.8
5,725,934	+		PFR28_05016	0.55	-1.7
5,725,934	+		PFR28_05016	0.55	-1.3
5,725,935	-		PFR28_05016	0.55	-1.4