Strain Fitness in Pseudomonas sp. RS175 around PFR28_04842

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
5,533,049	+		PFR28_04841	0.71	-0.3
5,533,053	-		PFR28_04841	0.71	-0.7
5,533,157	+		PFR28_04841	0.79	+0.3
5,533,157	+		PFR28_04841	0.79	+0.3
5,533,157	+		PFR28_04841	0.79	+0.0
5,533,157	+		PFR28_04841	0.79	+0.4
5,533,157	+		PFR28_04841	0.79	+0.5
5,533,157	+		PFR28_04841	0.79	+0.5
5,533,158	-		PFR28_04841	0.79	-0.9
5,533,158	-		PFR28_04841	0.79	+0.3
5,533,158	-		PFR28_04841	0.79	-0.9
5,533,158	-		PFR28_04841	0.79	+0.0
5,533,158	-		PFR28_04841	0.79	+0.1
5,533,158	-		PFR28_04841	0.79	-0.1
5,533,349	+				+0.3
5,533,349	+				-0.2
5,533,349	+				-1.3
5,533,350	-				+0.1
5,533,414	+				+0.5
5,533,414	+				-1.7
5,533,414	+				-0.4
5,533,414	+				+1.8
5,533,415	-				-0.3
5,533,415	-				-2.2
5,533,511	+				-0.2
5,533,511	+				-0.4
5,533,511	+				+0.0
5,533,511	+				+0.1
5,533,511	+				+0.2
5,533,511	+				-0.6
5,533,511	+				+0.6
5,533,511	+				-0.9
5,533,511	+				+0.4
5,533,511	+				-0.5
5,533,511	+				+0.2
5,533,511	+				+1.0
5,533,511	+				-1.2
5,533,512	-				-0.0
5,533,512	-				-0.1
5,533,512	-				-0.2
5,533,512	-				+0.7
5,533,512	-				-0.2
5,533,512	-				+0.1
5,533,512	-				-0.1
5,533,512	-				+1.1
5,533,512	-				-1.0
5,533,512	-				-0.1
5,533,512	-				-0.4
5,533,512	-				-0.4
5,533,512	-				-0.2
5,533,512	-				-0.3
5,533,512	-				-0.1
5,533,512	-				-0.1
5,533,516	+				+0.1
5,533,516	+				-0.1
5,533,516	+				-0.9
5,533,516	+				-0.1
5,533,516	+				-1.2
5,533,516	+				-1.0
5,533,517	-				-3.4
5,533,522	-				-0.3
5,533,537	+				-0.3
5,533,538	-				-3.2
5,533,553	+				-1.3
5,533,554	-				-1.7
5,533,554	-				-2.7
5,533,554	-				-0.3
5,533,554	-				-1.2
5,533,659	+				-2.8
5,533,659	+				-1.7
5,533,732	+				-1.5
5,533,733	-				-4.2
5,533,747	+				-1.9
5,533,747	+				-2.9
5,533,747	+				+0.3
5,533,747	+				-2.9
5,533,747	+				-3.1
5,533,747	+				-2.1
5,533,748	-				-1.7
5,533,748	-				-1.7
5,533,748	-				-2.9
5,533,748	-				-0.3
5,533,824	+		PFR28_04842	0.15	-3.5
5,533,954	+		PFR28_04842	0.26	-3.0
5,533,954	+		PFR28_04842	0.26	-3.6
5,533,955	-		PFR28_04842	0.26	+0.3
5,533,955	-		PFR28_04842	0.26	-2.3
5,534,176	+		PFR28_04842	0.44	-3.0
5,534,176	+		PFR28_04842	0.44	-2.5
5,534,176	+		PFR28_04842	0.44	-2.5
5,534,176	+		PFR28_04842	0.44	-2.7
5,534,176	+		PFR28_04842	0.44	-3.2
5,534,176	+		PFR28_04842	0.44	-2.5
5,534,177	-		PFR28_04842	0.44	-3.6
5,534,177	-		PFR28_04842	0.44	-0.3
5,534,177	-		PFR28_04842	0.44	-0.3
5,534,244	+		PFR28_04842	0.49	-2.7
5,534,244	+		PFR28_04842	0.49	-0.3
5,534,244	+		PFR28_04842	0.49	-2.9
5,534,245	-		PFR28_04842	0.49	-1.9
5,534,245	-		PFR28_04842	0.49	-1.7
5,534,245	-		PFR28_04842	0.49	-0.7
5,534,464	-		PFR28_04842	0.67	-1.9
5,534,581	+		PFR28_04842	0.77	-3.3
5,534,581	+		PFR28_04842	0.77	-2.7
5,534,581	+		PFR28_04842	0.77	-1.7
5,534,582	-		PFR28_04842	0.77	-3.4
5,534,582	-		PFR28_04842	0.77	-2.5
5,534,595	+		PFR28_04842	0.78	-0.0
5,534,595	+		PFR28_04842	0.78	+0.6
5,534,595	+		PFR28_04842	0.78	-0.4
5,534,773	+				-2.0
5,534,774	-				-2.7
5,534,801	-				-4.0
5,534,982	-				+0.4
5,534,982	-				-1.9
5,535,010	+				+0.4
5,535,011	-				+0.2
5,535,011	-				-1.7
5,535,033	+		PFR28_04843	0.12	+0.0
5,535,066	+		PFR28_04843	0.19	-0.1
5,535,066	+		PFR28_04843	0.19	+0.1
5,535,066	+		PFR28_04843	0.19	+0.3
5,535,066	+		PFR28_04843	0.19	+0.4
5,535,066	+		PFR28_04843	0.19	+1.3
5,535,066	+		PFR28_04843	0.19	+0.1
5,535,067	-		PFR28_04843	0.19	+0.0
5,535,067	-		PFR28_04843	0.19	+0.4
5,535,067	-		PFR28_04843	0.19	-0.4
5,535,067	-		PFR28_04843	0.19	-0.3
5,535,067	-		PFR28_04843	0.19	+0.1
5,535,067	-		PFR28_04843	0.19	+0.5
5,535,067	-		PFR28_04843	0.19	-0.1
5,535,067	-		PFR28_04843	0.19	+0.2
5,535,067	-		PFR28_04843	0.19	+0.2
5,535,067	-		PFR28_04843	0.19	+0.0
5,535,067	-		PFR28_04843	0.19	-0.2
5,535,067	-		PFR28_04843	0.19	-0.1
5,535,067	-		PFR28_04843	0.19	-0.3
5,535,067	-		PFR28_04843	0.19	-0.2
5,535,067	-		PFR28_04843	0.19	-0.2
5,535,067	-		PFR28_04843	0.19	-0.4
5,535,067	-		PFR28_04843	0.19	-0.5
5,535,067	-		PFR28_04843	0.19	+0.3
5,535,307	+		PFR28_04843	0.73	-0.2
5,535,307	+		PFR28_04843	0.73	+2.3
5,535,307	+		PFR28_04843	0.73	-0.6
5,535,307	+		PFR28_04843	0.73	+0.8
5,535,308	-		PFR28_04843	0.73	-0.1
5,535,308	-		PFR28_04843	0.73	+1.0
5,535,308	-		PFR28_04843	0.73	-0.7
5,535,308	-		PFR28_04843	0.73	+0.4
5,535,308	-		PFR28_04843	0.73	-0.6
5,535,308	-		PFR28_04843	0.73	+0.6
5,535,341	-		PFR28_04843	0.81	+0.9
5,535,393	+				+0.9
5,535,393	+				-1.1
5,535,394	-				+0.4
5,535,394	-				-0.5
5,535,394	-				+0.2
5,535,486	+				+0.5
5,535,486	+				-0.7
5,535,487	-				+0.3
5,535,487	-				+0.8
5,535,487	-				-1.2
5,535,517	+				+0.6
5,535,570	-				-0.2
5,535,802	+		PFR28_04844	0.47	+0.0
5,535,802	+		PFR28_04844	0.47	-0.0
5,535,802	+		PFR28_04844	0.47	-0.7
5,535,802	+		PFR28_04844	0.47	-0.2
5,535,802	+		PFR28_04844	0.47	+0.3
5,535,803	-		PFR28_04844	0.47	+0.3
5,535,803	-		PFR28_04844	0.47	+0.6
5,535,803	-		PFR28_04844	0.47	+0.2
5,535,803	-		PFR28_04844	0.47	-0.2
5,535,803	-		PFR28_04844	0.47	+0.4
5,535,803	-		PFR28_04844	0.47	+0.6
5,535,803	-		PFR28_04844	0.47	+0.3
5,535,803	-		PFR28_04844	0.47	-0.5
5,535,803	-		PFR28_04844	0.47	-0.3
5,535,803	-		PFR28_04844	0.47	+0.8
5,535,824	+		PFR28_04844	0.50	+0.3
5,535,824	+		PFR28_04844	0.50	+0.3
5,535,824	+		PFR28_04844	0.50	+0.1
5,535,824	+		PFR28_04844	0.50	-0.6
5,535,824	+		PFR28_04844	0.50	+1.1
5,535,824	+		PFR28_04844	0.50	-3.1
5,535,824	+		PFR28_04844	0.50	-0.4
5,535,824	+		PFR28_04844	0.50	-0.5
5,535,825	-		PFR28_04844	0.51	+1.3
5,535,825	-		PFR28_04844	0.51	-0.9
5,535,825	-		PFR28_04844	0.51	-0.6
5,535,825	-		PFR28_04844	0.51	-0.4
5,535,825	-		PFR28_04844	0.51	+3.3
5,535,825	-		PFR28_04844	0.51	-1.1