Strain Fitness in Pseudomonas sp. RS175 around PFR28_04252

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,854,188	+		PFR28_04250	0.66	+0.0
4,854,188	+		PFR28_04250	0.66	+0.4
4,854,188	+		PFR28_04250	0.66	+0.4
4,854,188	+		PFR28_04250	0.66	+0.5
4,854,188	+		PFR28_04250	0.66	+0.7
4,854,188	+		PFR28_04250	0.66	+1.3
4,854,188	+		PFR28_04250	0.66	+0.4
4,854,188	+		PFR28_04250	0.66	-0.5
4,854,188	+		PFR28_04250	0.66	+1.3
4,854,189	-		PFR28_04250	0.66	-0.8
4,854,189	-		PFR28_04250	0.66	+0.2
4,854,189	-		PFR28_04250	0.66	+0.1
4,854,189	-		PFR28_04250	0.66	-0.4
4,854,189	-		PFR28_04250	0.66	+0.8
4,854,233	+		PFR28_04250	0.80	+0.8
4,854,233	+		PFR28_04250	0.80	-0.5
4,854,233	+		PFR28_04250	0.80	+0.6
4,854,233	+		PFR28_04250	0.80	+0.1
4,854,233	+		PFR28_04250	0.80	-1.5
4,854,233	+		PFR28_04250	0.80	+1.1
4,854,234	-		PFR28_04250	0.80	+0.7
4,854,234	-		PFR28_04250	0.80	-0.1
4,854,234	-		PFR28_04250	0.80	-0.7
4,854,234	-		PFR28_04250	0.80	-1.2
4,854,234	-		PFR28_04250	0.80	-0.3
4,854,234	-		PFR28_04250	0.80	-0.7
4,854,234	-		PFR28_04250	0.80	-1.5
4,854,252	+		PFR28_04250	0.85	-0.7
4,854,252	+		PFR28_04250	0.85	+0.7
4,854,253	-		PFR28_04250	0.86	-0.1
4,854,261	+		PFR28_04250	0.88	-0.2
4,854,261	+		PFR28_04250	0.88	+0.6
4,854,262	-		PFR28_04250	0.89	+0.7
4,854,274	-				+0.1
4,854,279	+				-0.7
4,854,279	+				+1.2
4,854,538	+		PFR28_04251	0.14	-0.6
4,854,538	+		PFR28_04251	0.14	-1.2
4,854,538	+		PFR28_04251	0.14	-0.3
4,854,539	-		PFR28_04251	0.14	+0.2
4,854,539	-		PFR28_04251	0.14	-0.1
4,854,539	-		PFR28_04251	0.14	-0.4
4,854,561	-		PFR28_04251	0.17	+2.0
4,854,598	+		PFR28_04251	0.22	-0.1
4,854,598	+		PFR28_04251	0.22	-1.0
4,854,598	+		PFR28_04251	0.22	-1.2
4,854,598	+		PFR28_04251	0.22	+1.1
4,854,598	+		PFR28_04251	0.22	+1.7
4,854,599	-		PFR28_04251	0.22	+0.1
4,854,599	-		PFR28_04251	0.22	-0.8
4,854,599	-		PFR28_04251	0.22	+0.0
4,854,599	-		PFR28_04251	0.22	-0.4
4,854,599	-		PFR28_04251	0.22	+0.1
4,854,599	-		PFR28_04251	0.22	+0.7
4,854,608	-		PFR28_04251	0.23	-0.7
4,854,805	+		PFR28_04251	0.51	-1.0
4,854,805	+		PFR28_04251	0.51	-0.1
4,854,805	+		PFR28_04251	0.51	-0.1
4,854,805	+		PFR28_04251	0.51	-0.4
4,854,806	-		PFR28_04251	0.51	+0.8
4,855,101	-				-0.5
4,855,174	+				+0.3
4,855,174	+				-1.1
4,855,174	+				-1.7
4,855,174	+				-1.2
4,855,174	+				+0.3
4,855,174	+				-0.1
4,855,174	+				+1.6
4,855,174	+				-0.4
4,855,175	-				-0.5
4,855,175	-				+0.0
4,855,175	-				+0.7
4,855,175	-				-0.9
4,855,175	-				-0.0
4,855,175	-				-0.8
4,855,175	-				+0.5
4,855,214	-				-0.8
4,855,243	+				-1.0
4,855,244	-				-1.7
4,855,244	-				-1.0
4,855,441	+		PFR28_04252	0.34	-2.2
4,855,441	+		PFR28_04252	0.34	-1.9
4,855,441	+		PFR28_04252	0.34	-0.9
4,855,441	+		PFR28_04252	0.34	-1.5
4,855,441	+		PFR28_04252	0.34	-1.7
4,855,441	+		PFR28_04252	0.34	-1.5
4,855,441	+		PFR28_04252	0.34	-2.0
4,855,441	+		PFR28_04252	0.34	-0.3
4,855,442	-		PFR28_04252	0.34	-1.7
4,855,442	-		PFR28_04252	0.34	-0.8
4,855,442	-		PFR28_04252	0.34	+0.0
4,855,442	-		PFR28_04252	0.34	+0.0
4,855,442	-		PFR28_04252	0.34	-2.9
4,855,442	-		PFR28_04252	0.34	-1.8
4,855,442	-		PFR28_04252	0.34	-1.6
4,855,549	+		PFR28_04252	0.47	-1.6
4,855,549	+		PFR28_04252	0.47	-1.4
4,855,549	+		PFR28_04252	0.47	-1.3
4,855,550	-		PFR28_04252	0.47	-1.5
4,855,550	-		PFR28_04252	0.47	-1.1
4,855,550	-		PFR28_04252	0.47	-2.6
4,855,550	-		PFR28_04252	0.47	-3.5
4,855,751	-		PFR28_04252	0.73	-3.5
4,855,751	-		PFR28_04252	0.73	-1.0
4,855,885	+		PFR28_04252	0.90	-1.2
4,855,918	+				+0.0
4,855,919	-				-1.7
4,855,919	-				-3.2
4,855,919	-				-1.4
4,855,922	+				+0.0
4,855,922	+				-3.2
4,855,923	-				+0.9
4,856,142	-		PFR28_04253	0.39	-0.8
4,856,295	+				-0.7
4,856,295	+				-0.6
4,856,295	+				-0.9
4,856,295	+				-0.6
4,856,296	-				-0.2
4,856,461	+		PFR28_04254	0.30	-2.7
4,856,462	-		PFR28_04254	0.30	+0.3
4,856,462	-		PFR28_04254	0.30	+0.5
4,856,462	-		PFR28_04254	0.30	-0.7
4,856,534	+		PFR28_04254	0.50	+0.2
4,856,587	+		PFR28_04254	0.64	+0.0
4,856,587	+		PFR28_04254	0.64	+0.1
4,856,587	+		PFR28_04254	0.64	+1.3
4,856,587	+		PFR28_04254	0.64	+0.0
4,856,588	-		PFR28_04254	0.64	+0.1
4,856,588	-		PFR28_04254	0.64	-1.4
4,856,588	-		PFR28_04254	0.64	-1.7
4,856,618	-		PFR28_04254	0.72	+0.5
4,856,618	-		PFR28_04254	0.72	+1.3
4,856,711	+				+0.6
4,856,711	+				+0.8
4,856,712	-				-0.3
4,856,712	-				-0.3
4,856,712	-				-0.8
4,856,755	+				+0.6
4,856,755	+				+1.8
4,856,755	+				-1.3
4,856,755	+				+0.4
4,856,755	+				+0.6
4,856,755	+				+0.8
4,856,755	+				-0.1
4,856,755	+				-0.5
4,856,755	+				+0.7
4,856,755	+				-0.1
4,856,755	+				-0.2
4,856,755	+				+0.1
4,856,755	+				-0.0
4,856,755	+				-0.3
4,856,755	+				-0.2
4,856,755	+				+0.1
4,856,756	-				+0.3
4,856,756	-				-0.0
4,856,756	-				-0.7
4,856,756	-				+0.6
4,856,756	-				-0.4
4,856,756	-				-0.7
4,856,756	-				+0.3
4,856,756	-				-1.8
4,856,756	-				+0.1
4,856,756	-				+0.5
4,856,756	-				+0.3
4,856,756	-				+0.7
4,856,756	-				+0.1
4,856,756	-				-0.0
4,856,756	-				-0.2
4,856,756	-				-1.2
4,856,756	-				-0.1
4,856,757	+				+0.8
4,856,757	+				-0.1
4,856,757	+				-0.7
4,856,757	+				-1.0
4,856,758	-				+1.0
4,856,758	-				+1.5
4,856,758	-				+0.0
4,856,758	-				-0.7
4,856,758	-				+0.1
4,856,793	+				+0.2