Strain Fitness in Pseudomonas sp. RS175 around PFR28_04205

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,807,104	+		PFR28_04204	0.54	-0.8
4,807,104	+		PFR28_04204	0.54	-0.3
4,807,104	+		PFR28_04204	0.54	-0.4
4,807,104	+		PFR28_04204	0.54	-0.1
4,807,104	+		PFR28_04204	0.54	-0.6
4,807,104	+		PFR28_04204	0.54	-0.1
4,807,104	+		PFR28_04204	0.54	-0.7
4,807,104	+		PFR28_04204	0.54	+0.3
4,807,105	-		PFR28_04204	0.54	-0.6
4,807,105	-		PFR28_04204	0.54	+0.3
4,807,105	-		PFR28_04204	0.54	-0.4
4,807,105	-		PFR28_04204	0.54	-3.2
4,807,105	-		PFR28_04204	0.54	-0.4
4,807,105	-		PFR28_04204	0.54	-0.8
4,807,105	-		PFR28_04204	0.54	-2.8
4,807,105	-		PFR28_04204	0.54	-0.6
4,807,105	-		PFR28_04204	0.54	-0.1
4,807,300	+		PFR28_04204	0.64	-1.2
4,807,301	-		PFR28_04204	0.64	-0.4
4,807,301	-		PFR28_04204	0.64	+0.0
4,807,370	+		PFR28_04204	0.68	-0.9
4,807,560	+		PFR28_04204	0.78	+0.4
4,807,560	+		PFR28_04204	0.78	-1.2
4,807,561	-		PFR28_04204	0.78	-0.5
4,807,561	-		PFR28_04204	0.78	-0.8
4,807,561	-		PFR28_04204	0.78	-0.8
4,807,561	-		PFR28_04204	0.78	-0.8
4,807,561	-		PFR28_04204	0.78	-1.1
4,807,730	+		PFR28_04204	0.87	-1.1
4,807,731	-		PFR28_04204	0.88	-0.1
4,808,028	+				+0.5
4,808,028	+				-0.0
4,808,029	-				+0.8
4,808,029	-				+0.5
4,808,058	+				+0.8
4,808,059	-				+0.3
4,808,059	-				-0.3
4,808,059	-				-0.1
4,808,059	-				-0.2
4,808,059	-				+0.1
4,808,350	+		PFR28_04205	0.51	-0.2
4,808,470	+		PFR28_04205	0.70	+0.8
4,808,470	+		PFR28_04205	0.70	+0.7
4,808,481	+		PFR28_04205	0.72	+0.5
4,808,481	+		PFR28_04205	0.72	+0.4
4,808,481	+		PFR28_04205	0.72	-2.0
4,808,481	+		PFR28_04205	0.72	+1.3
4,808,481	+		PFR28_04205	0.72	-0.8
4,808,481	+		PFR28_04205	0.72	-0.7
4,808,481	+		PFR28_04205	0.72	-0.7
4,808,481	+		PFR28_04205	0.72	-0.1
4,808,481	+		PFR28_04205	0.72	+0.2
4,808,481	+		PFR28_04205	0.72	+0.4
4,808,481	+		PFR28_04205	0.72	-0.7
4,808,481	+		PFR28_04205	0.72	-0.9
4,808,481	+		PFR28_04205	0.72	-0.0
4,808,481	+		PFR28_04205	0.72	-0.1
4,808,481	+		PFR28_04205	0.72	+0.7
4,808,481	+		PFR28_04205	0.72	-0.0
4,808,481	+		PFR28_04205	0.72	-0.9
4,808,481	+		PFR28_04205	0.72	-0.8
4,808,481	+		PFR28_04205	0.72	+1.0
4,808,481	+		PFR28_04205	0.72	+0.4
4,808,481	+		PFR28_04205	0.72	+0.2
4,808,482	-		PFR28_04205	0.72	-0.4
4,808,482	-		PFR28_04205	0.72	+0.2
4,808,482	-		PFR28_04205	0.72	-0.1
4,808,482	-		PFR28_04205	0.72	-0.6
4,808,482	-		PFR28_04205	0.72	-0.2
4,808,482	-		PFR28_04205	0.72	+0.3
4,808,482	-		PFR28_04205	0.72	+0.5
4,808,482	-		PFR28_04205	0.72	-0.8
4,808,482	-		PFR28_04205	0.72	+0.4
4,808,482	-		PFR28_04205	0.72	-0.6
4,808,482	-		PFR28_04205	0.72	+0.3
4,808,482	-		PFR28_04205	0.72	+0.3
4,808,482	-		PFR28_04205	0.72	+0.1
4,808,482	-		PFR28_04205	0.72	-0.0
4,808,482	-		PFR28_04205	0.72	-1.1
4,808,482	-		PFR28_04205	0.72	+3.3
4,808,482	-		PFR28_04205	0.72	+0.1
4,808,485	+		PFR28_04205	0.73	+1.0
4,808,485	+		PFR28_04205	0.73	+1.1
4,808,485	+		PFR28_04205	0.73	+0.4
4,808,485	+		PFR28_04205	0.73	-0.2
4,808,485	+		PFR28_04205	0.73	+0.3
4,808,485	+		PFR28_04205	0.73	-0.2
4,808,485	+		PFR28_04205	0.73	+0.8
4,808,485	+		PFR28_04205	0.73	+0.4
4,808,486	-		PFR28_04205	0.73	-0.9
4,808,486	-		PFR28_04205	0.73	+0.7
4,808,486	-		PFR28_04205	0.73	+0.6
4,808,486	-		PFR28_04205	0.73	-0.7
4,808,486	-		PFR28_04205	0.73	+0.0
4,808,488	-		PFR28_04205	0.73	-0.7
4,808,547	+		PFR28_04205	0.83	+1.0
4,808,548	-		PFR28_04205	0.83	+0.5
4,808,631	-				+0.5
4,808,631	-				-0.3
4,808,768	+		PFR28_04206	0.20	+0.0
4,808,768	+		PFR28_04206	0.20	-0.5
4,808,768	+		PFR28_04206	0.20	+0.7
4,808,769	-		PFR28_04206	0.20	-0.0
4,808,883	-		PFR28_04206	0.41	-1.2
4,808,915	+		PFR28_04206	0.47	+0.3
4,808,916	-		PFR28_04206	0.47	+0.8
4,808,916	-		PFR28_04206	0.47	+0.6
4,808,916	-		PFR28_04206	0.47	-0.2
4,808,925	+		PFR28_04206	0.49	-1.4
4,808,925	+		PFR28_04206	0.49	+0.6
4,808,925	+		PFR28_04206	0.49	-0.2
4,808,925	+		PFR28_04206	0.49	+0.4
4,808,925	+		PFR28_04206	0.49	-0.5
4,808,925	+		PFR28_04206	0.49	+0.8
4,808,925	+		PFR28_04206	0.49	+0.3
4,808,926	-		PFR28_04206	0.49	-0.2
4,808,926	-		PFR28_04206	0.49	-0.5
4,808,926	-		PFR28_04206	0.49	-0.2
4,808,963	+		PFR28_04206	0.56	-0.9
4,808,963	+		PFR28_04206	0.56	-0.2
4,808,963	+		PFR28_04206	0.56	-1.5
4,808,963	+		PFR28_04206	0.56	+0.6
4,808,964	-		PFR28_04206	0.56	-0.6
4,808,964	-		PFR28_04206	0.56	-0.1
4,809,073	-		PFR28_04206	0.76	-0.3
4,809,086	+		PFR28_04206	0.78	+0.1
4,809,087	-		PFR28_04206	0.78	-0.2
4,809,087	-		PFR28_04206	0.78	-0.8
4,809,087	-		PFR28_04206	0.78	+0.1
4,809,087	-		PFR28_04206	0.78	-0.7
4,809,087	-		PFR28_04206	0.78	-0.7
4,809,089	+		PFR28_04206	0.78	-0.9
4,809,089	+		PFR28_04206	0.78	-0.4
4,809,089	+		PFR28_04206	0.78	+0.7
4,809,089	+		PFR28_04206	0.78	+0.5
4,809,090	-		PFR28_04206	0.79	-0.7
4,809,090	-		PFR28_04206	0.79	-0.7
4,809,090	-		PFR28_04206	0.79	+1.2
4,809,131	+		PFR28_04206	0.86	-0.4
4,809,132	-		PFR28_04206	0.86	-0.0
4,809,145	+		PFR28_04206	0.89	-0.2
4,809,145	+		PFR28_04206	0.89	-0.0
4,809,145	+		PFR28_04206	0.89	+0.6
4,809,146	-		PFR28_04206	0.89	+0.6
4,809,180	-				-0.3
4,809,200	-				+2.1
4,809,222	-				-1.3
4,809,231	+				+0.2
4,809,249	-				+0.8
4,809,249	-				+0.0
4,809,260	+				+0.3
4,809,260	+				+0.4
4,809,295	+				-0.1
4,809,323	+				+0.2
4,809,334	+				-1.2
4,809,454	+				+0.6
4,809,470	+				-1.0
4,809,470	+				+0.2
4,809,470	+				-0.1
4,809,470	+				+0.7
4,809,471	-				-0.1
4,809,471	-				+1.0
4,809,471	-				+0.1
4,809,472	+				-0.7
4,809,472	+				+0.4
4,809,472	+				+0.9
4,809,472	+				+0.4
4,809,472	+				+1.5
4,809,473	-				-0.7
4,809,473	-				+0.1
4,809,473	-				+0.1
4,809,473	-				-0.7
4,809,474	+				-1.2
4,809,474	+				+1.4
4,809,474	+				-0.7
4,809,474	+				+0.4
4,809,474	+				+0.1
4,809,474	+				+0.5
4,809,474	+				+0.1
4,809,474	+				+0.1
4,809,474	+				-1.2
4,809,474	+				-0.2
4,809,474	+				-0.4
4,809,474	+				+0.3
4,809,474	+				-0.2
4,809,475	-				+0.2
4,809,475	-				-1.0
4,809,475	-				+0.6
4,809,475	-				+0.0
4,809,475	-				+0.6
4,809,475	-				-0.2
4,809,475	-				+0.9
4,809,479	-				+0.3
4,809,559	-				+0.5
4,809,592	+				-0.4
4,809,629	-				+0.4
4,809,629	-				-0.1