Strain Fitness in Pseudomonas sp. RS175 around PFR28_04202

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,803,917	+				-0.1
4,803,917	+				-0.5
4,803,917	+				+0.1
4,803,917	+				+1.2
4,803,917	+				-1.0
4,803,918	-				-0.2
4,803,918	-				-1.5
4,803,918	-				+0.3
4,803,932	+				+0.6
4,803,932	+				+0.1
4,803,932	+				-1.3
4,803,932	+				-0.2
4,803,933	-				-1.2
4,803,957	+				-0.4
4,803,957	+				-0.2
4,803,957	+				+0.2
4,803,957	+				+0.6
4,803,958	-				-2.2
4,803,971	+				+0.2
4,803,974	+				-1.1
4,803,974	+				+0.0
4,803,974	+				-1.9
4,803,974	+				-2.0
4,803,975	-				-0.2
4,803,997	+				-0.2
4,803,997	+				-1.7
4,803,997	+				-0.6
4,803,998	-				-1.0
4,804,010	+				-1.0
4,804,011	-				+1.3
4,804,086	+				-0.7
4,804,086	+				-1.7
4,804,087	-				-1.2
4,804,164	+		PFR28_04202	0.11	+0.3
4,804,164	+		PFR28_04202	0.11	-0.5
4,804,164	+		PFR28_04202	0.11	-1.2
4,804,164	+		PFR28_04202	0.11	-1.0
4,804,164	+		PFR28_04202	0.11	-1.5
4,804,164	+		PFR28_04202	0.11	-2.2
4,804,165	-		PFR28_04202	0.11	-2.0
4,804,165	-		PFR28_04202	0.11	+1.3
4,804,165	-		PFR28_04202	0.11	-1.7
4,804,165	-		PFR28_04202	0.11	-2.8
4,804,191	+		PFR28_04202	0.15	-0.2
4,804,192	-		PFR28_04202	0.15	-1.2
4,804,192	-		PFR28_04202	0.15	-1.2
4,804,329	+		PFR28_04202	0.31	-1.5
4,804,353	-		PFR28_04202	0.34	-0.2
4,804,578	+		PFR28_04202	0.60	-0.2
4,804,579	-		PFR28_04202	0.60	-2.0
4,804,599	+		PFR28_04202	0.63	-0.2
4,804,599	+		PFR28_04202	0.63	-1.0
4,804,599	+		PFR28_04202	0.63	-1.0
4,804,599	+		PFR28_04202	0.63	-1.7
4,804,599	+		PFR28_04202	0.63	+0.3
4,804,599	+		PFR28_04202	0.63	-1.8
4,804,599	+		PFR28_04202	0.63	-0.2
4,804,599	+		PFR28_04202	0.63	-0.7
4,804,600	-		PFR28_04202	0.63	+1.3
4,804,600	-		PFR28_04202	0.63	-2.7
4,804,600	-		PFR28_04202	0.63	+1.3
4,804,600	-		PFR28_04202	0.63	-0.7
4,804,600	-		PFR28_04202	0.63	-0.7
4,804,600	-		PFR28_04202	0.63	-2.2
4,804,667	+		PFR28_04202	0.71	-1.5
4,804,667	+		PFR28_04202	0.71	-1.8
4,804,677	+		PFR28_04202	0.72	-1.5
4,804,678	-		PFR28_04202	0.72	+0.3
4,804,678	-		PFR28_04202	0.72	-1.5
4,804,678	-		PFR28_04202	0.72	-1.5
4,804,851	+				-1.0
4,804,852	-				-0.2
4,804,852	-				+0.3
4,804,852	-				-1.7
4,804,914	+				+0.1
4,804,915	-				-0.0
4,804,915	-				+0.2
4,805,031	+				-1.0
4,805,031	+				-0.4
4,805,032	-				-0.1
4,805,032	-				-2.5
4,805,032	-				-0.3
4,805,032	-				-0.2
4,805,032	-				-0.7
4,805,035	+				-1.0
4,805,035	+				-0.3
4,805,035	+				+0.8
4,805,035	+				+0.2
4,805,036	-				-0.5
4,805,036	-				-0.2
4,805,036	-				-1.1
4,805,056	-				-0.4
4,805,169	+		PFR28_04203	0.13	-0.7
4,805,169	+		PFR28_04203	0.13	-1.2
4,805,169	+		PFR28_04203	0.13	-0.5
4,805,169	+		PFR28_04203	0.13	-0.7
4,805,169	+		PFR28_04203	0.13	+0.3
4,805,169	+		PFR28_04203	0.13	-0.2
4,805,169	+		PFR28_04203	0.13	-0.9
4,805,169	+		PFR28_04203	0.13	-0.7
4,805,169	+		PFR28_04203	0.13	-0.2
4,805,169	+		PFR28_04203	0.13	-0.4
4,805,169	+		PFR28_04203	0.13	-0.2
4,805,169	+		PFR28_04203	0.13	-0.5
4,805,169	+		PFR28_04203	0.13	-0.0
4,805,169	+		PFR28_04203	0.13	-1.2
4,805,169	+		PFR28_04203	0.13	-0.8
4,805,169	+		PFR28_04203	0.13	-1.2
4,805,169	+		PFR28_04203	0.13	-0.2
4,805,170	-		PFR28_04203	0.13	-1.3
4,805,170	-		PFR28_04203	0.13	-0.1
4,805,170	-		PFR28_04203	0.13	+0.2
4,805,170	-		PFR28_04203	0.13	-0.3
4,805,170	-		PFR28_04203	0.13	+0.8
4,805,170	-		PFR28_04203	0.13	-0.4
4,805,170	-		PFR28_04203	0.13	-0.2
4,805,175	+		PFR28_04203	0.14	-0.7
4,805,175	+		PFR28_04203	0.14	-0.4
4,805,176	-		PFR28_04203	0.14	-0.4
4,805,176	-		PFR28_04203	0.14	-0.6
4,805,176	-		PFR28_04203	0.14	-0.2
4,805,209	-		PFR28_04203	0.18	+0.0
4,805,227	+		PFR28_04203	0.21	-0.3
4,805,228	-		PFR28_04203	0.21	+0.7
4,805,359	+		PFR28_04203	0.38	-3.6
4,805,359	+		PFR28_04203	0.38	+0.5
4,805,359	+		PFR28_04203	0.38	+0.1
4,805,359	+		PFR28_04203	0.38	+0.9
4,805,359	+		PFR28_04203	0.38	+0.3
4,805,359	+		PFR28_04203	0.38	+0.5
4,805,360	-		PFR28_04203	0.38	-0.7
4,805,360	-		PFR28_04203	0.38	-0.7
4,805,360	-		PFR28_04203	0.38	+0.5
4,805,360	-		PFR28_04203	0.38	-0.8
4,805,361	+		PFR28_04203	0.38	-0.1
4,805,362	-		PFR28_04203	0.38	-0.1
4,805,362	-		PFR28_04203	0.38	-0.7
4,805,362	-		PFR28_04203	0.38	-0.7
4,805,398	+		PFR28_04203	0.43	-0.5
4,805,399	-		PFR28_04203	0.43	-0.6
4,805,399	-		PFR28_04203	0.43	-0.2
4,805,479	-		PFR28_04203	0.53	-0.0
4,805,479	-		PFR28_04203	0.53	-0.1
4,805,484	+		PFR28_04203	0.54	-0.2
4,805,485	-		PFR28_04203	0.54	-0.2
4,805,588	+		PFR28_04203	0.67	-0.6
4,805,682	+		PFR28_04203	0.79	-0.2
4,805,682	+		PFR28_04203	0.79	-1.7
4,805,682	+		PFR28_04203	0.79	-0.1
4,805,682	+		PFR28_04203	0.79	-0.3
4,805,683	-		PFR28_04203	0.79	-0.1
4,805,716	+		PFR28_04203	0.84	-0.5
4,805,717	-		PFR28_04203	0.84	+0.2
4,805,717	-		PFR28_04203	0.84	-0.8
4,805,717	-		PFR28_04203	0.84	+0.6
4,805,770	-				-0.1
4,805,891	+				-0.3
4,805,891	+				-0.8
4,805,891	+				-0.2
4,805,891	+				+0.1
4,805,891	+				-0.3
4,805,892	-				+1.5
4,805,893	+				+0.2
4,805,893	+				-0.1
4,805,894	-				-3.3
4,805,894	-				-1.1
4,805,894	-				-0.3
4,805,894	-				-0.1