Strain Fitness in Pseudomonas sp. RS175 around PFR28_04103

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,687,943	+		PFR28_04102	0.33	+0.3
4,687,943	+		PFR28_04102	0.33	-0.7
4,687,944	-		PFR28_04102	0.33	-0.9
4,687,944	-		PFR28_04102	0.33	-1.3
4,687,944	-		PFR28_04102	0.33	-1.0
4,687,944	-		PFR28_04102	0.33	-0.6
4,687,945	+		PFR28_04102	0.33	-0.9
4,687,945	+		PFR28_04102	0.33	-2.4
4,687,945	+		PFR28_04102	0.33	-1.0
4,687,945	+		PFR28_04102	0.33	-2.4
4,687,945	+		PFR28_04102	0.33	+1.3
4,687,945	+		PFR28_04102	0.33	-1.7
4,687,945	+		PFR28_04102	0.33	+0.7
4,687,945	+		PFR28_04102	0.33	-1.3
4,687,945	+		PFR28_04102	0.33	-1.9
4,687,945	+		PFR28_04102	0.33	+0.3
4,687,945	+		PFR28_04102	0.33	-0.3
4,687,945	+		PFR28_04102	0.33	-1.7
4,687,945	+		PFR28_04102	0.33	-1.5
4,687,945	+		PFR28_04102	0.33	-1.0
4,687,945	+		PFR28_04102	0.33	-2.0
4,687,945	+		PFR28_04102	0.33	-1.0
4,687,946	-		PFR28_04102	0.33	-2.4
4,687,946	-		PFR28_04102	0.33	-0.7
4,687,946	-		PFR28_04102	0.33	-0.3
4,687,946	-		PFR28_04102	0.33	-1.3
4,687,946	-		PFR28_04102	0.33	-1.7
4,687,946	-		PFR28_04102	0.33	-1.7
4,687,946	-		PFR28_04102	0.33	-3.1
4,687,946	-		PFR28_04102	0.33	-1.0
4,687,946	-		PFR28_04102	0.33	-1.5
4,687,946	-		PFR28_04102	0.33	-1.8
4,687,946	-		PFR28_04102	0.33	-0.3
4,687,946	-		PFR28_04102	0.33	+0.3
4,687,946	-		PFR28_04102	0.33	+0.3
4,687,946	-		PFR28_04102	0.33	-1.3
4,687,946	-		PFR28_04102	0.33	-1.0
4,687,946	-		PFR28_04102	0.33	-0.7
4,687,946	-		PFR28_04102	0.33	-0.7
4,687,946	-		PFR28_04102	0.33	-0.7
4,687,951	+		PFR28_04102	0.33	+0.3
4,687,951	+		PFR28_04102	0.33	-1.3
4,687,951	+		PFR28_04102	0.33	-1.6
4,687,952	-		PFR28_04102	0.34	-1.0
4,687,952	-		PFR28_04102	0.34	-1.0
4,688,019	-		PFR28_04102	0.39	-1.0
4,688,055	+		PFR28_04102	0.42	+0.3
4,688,055	+		PFR28_04102	0.42	-0.9
4,688,055	+		PFR28_04102	0.42	+0.3
4,688,055	+		PFR28_04102	0.42	-1.9
4,688,056	-		PFR28_04102	0.42	-0.7
4,688,056	-		PFR28_04102	0.42	-0.3
4,688,056	-		PFR28_04102	0.42	-2.0
4,688,214	+		PFR28_04102	0.56	-0.0
4,688,293	+		PFR28_04102	0.62	+0.3
4,688,293	+		PFR28_04102	0.62	+1.3
4,688,294	-		PFR28_04102	0.63	-1.9
4,688,416	+		PFR28_04102	0.73	-1.3
4,688,416	+		PFR28_04102	0.73	-0.3
4,688,416	+		PFR28_04102	0.73	-1.3
4,688,416	+		PFR28_04102	0.73	-0.3
4,688,416	+		PFR28_04102	0.73	-1.0
4,688,417	-		PFR28_04102	0.73	+0.1
4,688,417	-		PFR28_04102	0.73	+0.3
4,688,417	-		PFR28_04102	0.73	-0.8
4,688,529	+		PFR28_04102	0.82	-0.3
4,688,530	-		PFR28_04102	0.83	-2.4
4,688,530	-		PFR28_04102	0.83	-0.9
4,688,530	-		PFR28_04102	0.83	-1.5
4,688,532	-		PFR28_04102	0.83	-3.0
4,688,532	-		PFR28_04102	0.83	-1.5
4,688,596	+		PFR28_04102	0.88	-0.7
4,688,596	+		PFR28_04102	0.88	-1.9
4,688,596	+		PFR28_04102	0.88	-1.9
4,688,597	-		PFR28_04102	0.88	-1.9
4,688,597	-		PFR28_04102	0.88	-0.5
4,688,684	-				-0.7
4,688,684	-				+0.7
4,688,754	+				+0.5
4,688,754	+				-2.8
4,688,754	+				-0.7
4,688,755	-				-0.9
4,688,755	-				+0.3
4,688,755	-				-0.7
4,688,755	-				-0.5
4,688,899	-				+0.1
4,689,064	-		PFR28_04103	0.17	-2.3
4,689,384	+		PFR28_04103	0.48	-0.5
4,689,384	+		PFR28_04103	0.48	-1.7
4,689,385	-		PFR28_04103	0.48	-1.9
4,689,385	-		PFR28_04103	0.48	-0.7
4,689,411	+		PFR28_04103	0.50	-1.5
4,689,411	+		PFR28_04103	0.50	-0.3
4,689,412	-		PFR28_04103	0.50	-1.5
4,689,412	-		PFR28_04103	0.50	-1.9
4,689,412	-		PFR28_04103	0.50	-0.3
4,689,424	+		PFR28_04103	0.51	-1.3
4,689,424	+		PFR28_04103	0.51	-0.7
4,689,425	-		PFR28_04103	0.51	-0.3
4,689,430	+		PFR28_04103	0.52	-2.2
4,689,430	+		PFR28_04103	0.52	-0.3
4,689,431	-		PFR28_04103	0.52	-2.2
4,689,431	-		PFR28_04103	0.52	-1.4
4,689,431	-		PFR28_04103	0.52	-0.7
4,689,438	+		PFR28_04103	0.53	-1.5
4,689,438	+		PFR28_04103	0.53	-0.3
4,689,438	+		PFR28_04103	0.53	-2.0
4,689,439	-		PFR28_04103	0.53	-0.3
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,471	+		PFR28_04103	0.56	-0.3
4,689,471	+		PFR28_04103	0.56	-0.0
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,471	+		PFR28_04103	0.56	-0.7
4,689,471	+		PFR28_04103	0.56	-1.3
4,689,471	+		PFR28_04103	0.56	-1.0
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,471	+		PFR28_04103	0.56	-0.3
4,689,471	+		PFR28_04103	0.56	-1.3
4,689,471	+		PFR28_04103	0.56	-1.7
4,689,471	+		PFR28_04103	0.56	-1.3
4,689,471	+		PFR28_04103	0.56	-1.9
4,689,472	-		PFR28_04103	0.56	-1.3
4,689,472	-		PFR28_04103	0.56	-0.9
4,689,472	-		PFR28_04103	0.56	-0.6
4,689,472	-		PFR28_04103	0.56	-2.0
4,689,472	-		PFR28_04103	0.56	-1.3
4,689,472	-		PFR28_04103	0.56	-1.3
4,689,472	-		PFR28_04103	0.56	-0.3
4,689,472	-		PFR28_04103	0.56	-1.7
4,689,472	-		PFR28_04103	0.56	-2.5
4,689,472	-		PFR28_04103	0.56	-0.3
4,689,474	+		PFR28_04103	0.56	-2.9
4,689,474	+		PFR28_04103	0.56	-0.7
4,689,474	+		PFR28_04103	0.56	-1.3
4,689,474	+		PFR28_04103	0.56	-1.7
4,689,474	+		PFR28_04103	0.56	-2.6
4,689,474	+		PFR28_04103	0.56	-1.7
4,689,475	-		PFR28_04103	0.56	-1.5
4,689,475	-		PFR28_04103	0.56	-0.3
4,689,585	+		PFR28_04103	0.67	+2.3
4,689,585	+		PFR28_04103	0.67	-0.3
4,689,585	+		PFR28_04103	0.67	+1.9
4,689,586	-		PFR28_04103	0.67	-0.3
4,689,586	-		PFR28_04103	0.67	-0.4
4,689,586	-		PFR28_04103	0.67	-1.7
4,689,723	+		PFR28_04103	0.80	+0.1
4,689,723	+		PFR28_04103	0.80	-1.7
4,689,724	-		PFR28_04103	0.80	-1.0
4,689,724	-		PFR28_04103	0.80	-1.3
4,689,724	-		PFR28_04103	0.80	-2.0
4,689,724	-		PFR28_04103	0.80	-1.3
4,689,724	-		PFR28_04103	0.80	-1.3
4,689,724	-		PFR28_04103	0.80	-2.9
4,689,745	-		PFR28_04103	0.82	-0.7
4,689,745	-		PFR28_04103	0.82	-1.9
4,689,745	-		PFR28_04103	0.82	+0.3
4,689,953	+				-0.1
4,689,953	+				-2.2
4,689,953	+				+0.8
4,689,953	+				-1.6
4,689,954	-				+0.1
4,689,954	-				-1.4
4,689,954	-				-0.8
4,689,954	-				+0.0
4,689,954	-				-0.2
4,689,954	-				+0.7
4,689,954	-				-1.0
4,689,954	-				-1.0
4,690,012	+				-1.7
4,690,012	+				-0.7
4,690,012	+				-0.3
4,690,012	+				-1.7
4,690,013	-				+0.4
4,690,013	-				+0.2
4,690,013	-				-0.6
4,690,013	-				+0.4
4,690,016	+				-1.8
4,690,016	+				+1.3
4,690,016	+				-2.6
4,690,016	+				-2.5
4,690,016	+				-0.0
4,690,017	-				-0.1
4,690,017	-				+0.2
4,690,095	+				+1.3
4,690,095	+				-1.0
4,690,095	+				+0.3
4,690,095	+				+0.5
4,690,095	+				+0.1
4,690,096	-				+0.7
4,690,132	+		PFR28_04104	0.14	+0.1
4,690,133	-		PFR28_04104	0.14	-0.6
4,690,133	-		PFR28_04104	0.14	-1.1
4,690,133	-		PFR28_04104	0.14	-1.0
4,690,133	-		PFR28_04104	0.14	-0.4
4,690,245	-		PFR28_04104	0.29	+0.1
4,690,272	-		PFR28_04104	0.33	-1.9
4,690,338	+		PFR28_04104	0.42	-0.5
4,690,339	-		PFR28_04104	0.42	+0.1
4,690,410	+		PFR28_04104	0.52	+1.2
4,690,427	-		PFR28_04104	0.54	+0.8
4,690,492	-		PFR28_04104	0.63	-0.3
4,690,727	+				-0.1
4,690,727	+				+0.3
4,690,727	+				+0.0
4,690,727	+				-0.5
4,690,727	+				+0.2
4,690,728	-				+0.9
4,690,728	-				-1.5
4,690,728	-				-0.9
4,690,728	-				-0.4
4,690,728	-				+0.5
4,690,728	-				-0.1
4,690,728	-				+0.3
4,690,728	-				+0.7
4,690,728	-				+0.9
4,690,728	-				-0.3
4,690,895	+				-1.2
4,690,895	+				+0.2
4,690,895	+				+0.1
4,690,895	+				+0.1
4,690,896	-				-2.4