Strain Fitness in Pseudomonas sp. RS175 around PFR28_03724

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,290,785	-				+0.4
4,290,833	-				+0.7
4,290,981	+		PFR28_03723	0.36	-1.1
4,290,981	+		PFR28_03723	0.36	-0.6
4,290,981	+		PFR28_03723	0.36	+0.1
4,290,982	-		PFR28_03723	0.36	+0.7
4,290,982	-		PFR28_03723	0.36	+0.4
4,290,982	-		PFR28_03723	0.36	+1.0
4,290,982	-		PFR28_03723	0.36	-0.5
4,291,014	+		PFR28_03723	0.45	+1.3
4,291,014	+		PFR28_03723	0.45	+0.2
4,291,014	+		PFR28_03723	0.45	-0.8
4,291,014	+		PFR28_03723	0.45	+0.5
4,291,015	-		PFR28_03723	0.45	-0.4
4,291,015	-		PFR28_03723	0.45	-0.7
4,291,015	-		PFR28_03723	0.45	+0.5
4,291,015	-		PFR28_03723	0.45	-1.6
4,291,015	-		PFR28_03723	0.45	-0.5
4,291,015	-		PFR28_03723	0.45	+0.3
4,291,015	-		PFR28_03723	0.45	-0.7
4,291,110	+		PFR28_03723	0.70	+0.1
4,291,110	+		PFR28_03723	0.70	+0.8
4,291,111	-		PFR28_03723	0.70	-0.4
4,291,111	-		PFR28_03723	0.70	-0.8
4,291,111	-		PFR28_03723	0.70	-3.1
4,291,119	+		PFR28_03723	0.72	+1.1
4,291,119	+		PFR28_03723	0.72	-0.3
4,291,120	-		PFR28_03723	0.73	+0.7
4,291,120	-		PFR28_03723	0.73	+0.5
4,291,161	+		PFR28_03723	0.83	-0.0
4,291,161	+		PFR28_03723	0.83	+0.8
4,291,161	+		PFR28_03723	0.83	+0.4
4,291,161	+		PFR28_03723	0.83	+0.2
4,291,161	+		PFR28_03723	0.83	+0.6
4,291,161	+		PFR28_03723	0.83	+0.4
4,291,161	+		PFR28_03723	0.83	-0.7
4,291,161	+		PFR28_03723	0.83	+1.7
4,291,161	+		PFR28_03723	0.83	+0.4
4,291,161	+		PFR28_03723	0.83	-0.1
4,291,161	+		PFR28_03723	0.83	+1.1
4,291,161	+		PFR28_03723	0.83	+0.9
4,291,162	-		PFR28_03723	0.84	+0.0
4,291,162	-		PFR28_03723	0.84	+0.0
4,291,162	-		PFR28_03723	0.84	+1.3
4,291,162	-		PFR28_03723	0.84	+0.9
4,291,162	-		PFR28_03723	0.84	-0.1
4,291,162	-		PFR28_03723	0.84	-0.2
4,291,162	-		PFR28_03723	0.84	-0.5
4,291,162	-		PFR28_03723	0.84	-0.1
4,291,162	-		PFR28_03723	0.84	+2.3
4,291,162	-		PFR28_03723	0.84	-0.6
4,291,405	+				+0.4
4,291,405	+				+1.3
4,291,406	-				-2.0
4,291,406	-				-0.8
4,291,406	-				+0.3
4,291,410	+				-0.4
4,291,411	-				-0.6
4,291,411	-				-0.9
4,291,483	-				-2.2
4,291,506	-				-1.3
4,291,854	-		PFR28_03724	0.20	-1.5
4,291,956	+		PFR28_03724	0.26	-1.9
4,291,957	-		PFR28_03724	0.26	-1.7
4,291,957	-		PFR28_03724	0.26	+1.0
4,292,073	+		PFR28_03724	0.33	-2.7
4,292,073	+		PFR28_03724	0.33	-2.4
4,292,073	+		PFR28_03724	0.33	-2.9
4,292,074	-		PFR28_03724	0.33	-1.9
4,292,074	-		PFR28_03724	0.33	-2.2
4,292,211	+		PFR28_03724	0.41	-1.3
4,292,312	+		PFR28_03724	0.47	-2.0
4,292,312	+		PFR28_03724	0.47	-4.3
4,292,313	-		PFR28_03724	0.47	-1.0
4,292,313	-		PFR28_03724	0.47	+0.3
4,292,427	+		PFR28_03724	0.54	-2.7
4,292,427	+		PFR28_03724	0.54	-1.3
4,292,428	-		PFR28_03724	0.54	-2.4
4,292,547	+		PFR28_03724	0.61	-2.7
4,292,556	+		PFR28_03724	0.62	-1.9
4,292,557	-		PFR28_03724	0.62	-1.3
4,292,557	-		PFR28_03724	0.62	-1.7
4,292,557	-		PFR28_03724	0.62	-1.4
4,292,617	+		PFR28_03724	0.66	-1.9
4,292,617	+		PFR28_03724	0.66	-1.5
4,292,697	+		PFR28_03724	0.70	-2.8
4,292,796	+		PFR28_03724	0.76	+0.3
4,292,796	+		PFR28_03724	0.76	-3.0
4,293,000	+		PFR28_03724	0.89	-1.5
4,293,000	+		PFR28_03724	0.89	+1.3
4,293,001	-		PFR28_03724	0.89	-1.5
4,293,001	-		PFR28_03724	0.89	-1.0
4,293,001	-		PFR28_03724	0.89	-2.2
4,293,001	-		PFR28_03724	0.89	+0.7
4,293,096	+				-0.3
4,293,096	+				-1.5
4,293,097	-				-2.0
4,293,097	-				-2.8
4,293,162	+				-2.3
4,293,162	+				-1.1
4,293,162	+				-2.4
4,293,163	-				-3.1
4,293,269	+				-0.5
4,293,269	+				-0.8
4,293,269	+				-1.3
4,293,269	+				-0.6
4,293,269	+				-0.4
4,293,269	+				-1.4
4,293,269	+				+0.0
4,293,269	+				+0.4
4,293,269	+				-0.3
4,293,270	-				-0.9
4,293,270	-				-1.1
4,293,270	-				-0.5
4,293,270	-				-0.9
4,293,343	-				-1.2
4,293,343	-				-0.9
4,293,365	+				-0.7
4,293,365	+				+0.2
4,293,446	+				-0.4
4,293,446	+				-1.0
4,293,446	+				+0.5
4,293,446	+				+1.3
4,293,446	+				+0.4
4,293,446	+				+0.3
4,293,446	+				+0.1
4,293,447	-				-1.2
4,293,447	-				-0.9
4,293,447	-				+0.2
4,293,447	-				-0.6
4,293,447	-				-0.9
4,293,447	-				-1.0
4,293,458	+				+0.2
4,293,772	+		PFR28_03725	0.20	-0.2
4,293,773	-		PFR28_03725	0.20	-1.0
4,293,785	+		PFR28_03725	0.21	+0.8
4,293,785	+		PFR28_03725	0.21	+0.4
4,293,785	+		PFR28_03725	0.21	+0.7
4,293,785	+		PFR28_03725	0.21	-0.1
4,293,785	+		PFR28_03725	0.21	+0.3
4,293,785	+		PFR28_03725	0.21	+0.4
4,293,785	+		PFR28_03725	0.21	-0.4
4,293,785	+		PFR28_03725	0.21	+0.2
4,293,785	+		PFR28_03725	0.21	-0.1
4,293,786	-		PFR28_03725	0.21	+2.3
4,293,786	-		PFR28_03725	0.21	+0.1
4,293,786	-		PFR28_03725	0.21	+0.2
4,293,786	-		PFR28_03725	0.21	+0.1
4,293,786	-		PFR28_03725	0.21	+1.3
4,293,786	-		PFR28_03725	0.21	+0.1
4,293,786	-		PFR28_03725	0.21	-0.3
4,293,786	-		PFR28_03725	0.21	-0.8
4,293,786	-		PFR28_03725	0.21	+0.2
4,293,786	-		PFR28_03725	0.21	-0.4
4,293,786	-		PFR28_03725	0.21	-1.4
4,293,786	-		PFR28_03725	0.21	+0.4
4,293,786	-		PFR28_03725	0.21	-0.9
4,293,786	-		PFR28_03725	0.21	-0.6
4,293,786	-		PFR28_03725	0.21	-0.8
4,293,786	-		PFR28_03725	0.21	-0.1
4,293,813	-		PFR28_03725	0.22	-1.8
4,294,047	+		PFR28_03725	0.35	+0.3
4,294,047	+		PFR28_03725	0.35	+0.1
4,294,047	+		PFR28_03725	0.35	+1.0
4,294,047	+		PFR28_03725	0.35	+1.0
4,294,047	+		PFR28_03725	0.35	+0.2
4,294,047	+		PFR28_03725	0.35	-0.3
4,294,047	+		PFR28_03725	0.35	-0.7
4,294,048	-		PFR28_03725	0.35	+0.1
4,294,154	+		PFR28_03725	0.40	-0.2
4,294,154	+		PFR28_03725	0.40	-0.1
4,294,154	+		PFR28_03725	0.40	-0.5
4,294,154	+		PFR28_03725	0.40	-0.2
4,294,154	+		PFR28_03725	0.40	+0.3
4,294,155	-		PFR28_03725	0.40	-0.6
4,294,155	-		PFR28_03725	0.40	+0.3
4,294,155	-		PFR28_03725	0.40	+0.2
4,294,155	-		PFR28_03725	0.40	-0.3
4,294,155	-		PFR28_03725	0.40	-0.1