Strain Fitness in Pseudomonas sp. RS175 around PFR28_03714

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,278,939	+		PFR28_03713	0.46	-0.2
4,278,939	+		PFR28_03713	0.46	+1.5
4,278,940	-		PFR28_03713	0.46	-0.8
4,278,940	-		PFR28_03713	0.46	+0.5
4,278,940	-		PFR28_03713	0.46	+0.3
4,278,954	+		PFR28_03713	0.47	-1.0
4,278,954	+		PFR28_03713	0.47	+0.3
4,278,954	+		PFR28_03713	0.47	-0.3
4,278,954	+		PFR28_03713	0.47	+0.1
4,278,955	-		PFR28_03713	0.47	-0.1
4,278,955	-		PFR28_03713	0.47	+1.0
4,279,043	-		PFR28_03713	0.55	-0.1
4,279,310	+		PFR28_03713	0.77	-0.2
4,279,311	-		PFR28_03713	0.78	-0.6
4,279,311	-		PFR28_03713	0.78	-1.0
4,279,311	-		PFR28_03713	0.78	+1.3
4,279,560	+				+0.2
4,279,560	+				+0.1
4,279,560	+				+0.1
4,279,560	+				+0.6
4,279,560	+				-0.1
4,279,560	+				-0.5
4,279,560	+				+0.1
4,279,560	+				-0.0
4,279,560	+				+0.2
4,279,561	-				-0.7
4,279,561	-				+0.8
4,279,607	+				+0.7
4,279,607	+				-0.2
4,279,608	-				+0.4
4,279,691	+				+1.3
4,279,691	+				+0.2
4,279,691	+				+0.8
4,279,691	+				-0.8
4,279,691	+				+0.4
4,279,692	-				+0.9
4,279,692	-				+0.0
4,279,692	-				+0.4
4,279,692	-				+0.6
4,279,714	+				-0.5
4,279,714	+				+0.1
4,279,714	+				-0.2
4,279,715	-				-0.3
4,279,807	+				-0.6
4,279,808	-				-0.9
4,279,866	+				-0.4
4,279,867	-				-2.6
4,279,874	+				-2.0
4,279,874	+				-0.7
4,279,875	-				-0.7
4,279,875	-				-0.7
4,279,875	-				+0.2
4,279,882	+				+1.3
4,279,882	+				-0.7
4,279,883	-				-1.0
4,279,883	-				-0.5
4,279,952	+		PFR28_03714	0.12	-0.3
4,279,952	+		PFR28_03714	0.12	-2.4
4,279,952	+		PFR28_03714	0.12	-1.5
4,279,952	+		PFR28_03714	0.12	-1.4
4,279,952	+		PFR28_03714	0.12	-1.9
4,279,952	+		PFR28_03714	0.12	-1.8
4,279,952	+		PFR28_03714	0.12	-1.4
4,279,952	+		PFR28_03714	0.12	-1.0
4,279,952	+		PFR28_03714	0.12	-0.9
4,279,952	+		PFR28_03714	0.12	-0.2
4,279,952	+		PFR28_03714	0.12	-1.8
4,279,952	+		PFR28_03714	0.12	-3.8
4,279,952	+		PFR28_03714	0.12	-0.9
4,279,953	-		PFR28_03714	0.12	-0.2
4,279,953	-		PFR28_03714	0.12	-0.8
4,279,953	-		PFR28_03714	0.12	-2.0
4,279,953	-		PFR28_03714	0.12	-1.1
4,279,953	-		PFR28_03714	0.12	-0.1
4,279,953	-		PFR28_03714	0.12	-2.0
4,279,953	-		PFR28_03714	0.12	-0.3
4,279,953	-		PFR28_03714	0.12	-1.6
4,279,953	-		PFR28_03714	0.12	-0.0
4,279,953	-		PFR28_03714	0.12	-1.5
4,279,953	-		PFR28_03714	0.12	-3.2
4,279,953	-		PFR28_03714	0.12	-1.5
4,279,953	-		PFR28_03714	0.12	-0.6
4,279,953	-		PFR28_03714	0.12	-3.3
4,279,953	-		PFR28_03714	0.12	-1.8
4,279,953	-		PFR28_03714	0.12	-1.4
4,279,953	-		PFR28_03714	0.12	-3.5
4,279,953	-		PFR28_03714	0.12	-1.9
4,279,953	-		PFR28_03714	0.12	-0.7
4,279,953	-		PFR28_03714	0.12	-3.3
4,279,953	-		PFR28_03714	0.12	-2.0
4,279,953	-		PFR28_03714	0.12	-0.3
4,279,953	-		PFR28_03714	0.12	-0.4
4,279,961	-		PFR28_03714	0.14	+0.7
4,279,976	+		PFR28_03714	0.18	-3.0
4,279,976	+		PFR28_03714	0.18	-1.9
4,279,976	+		PFR28_03714	0.18	-0.9
4,279,976	+		PFR28_03714	0.18	-0.8
4,279,976	+		PFR28_03714	0.18	-3.5
4,279,976	+		PFR28_03714	0.18	-1.2
4,279,976	+		PFR28_03714	0.18	-2.2
4,279,977	-		PFR28_03714	0.18	-3.2
4,279,977	-		PFR28_03714	0.18	-1.2
4,279,977	-		PFR28_03714	0.18	-1.2
4,279,977	-		PFR28_03714	0.18	-1.7
4,279,977	-		PFR28_03714	0.18	-1.2
4,279,977	-		PFR28_03714	0.18	-1.4
4,279,977	-		PFR28_03714	0.18	-0.9
4,279,977	-		PFR28_03714	0.18	-2.4
4,279,977	-		PFR28_03714	0.18	-3.1
4,279,977	-		PFR28_03714	0.18	-2.1
4,279,977	-		PFR28_03714	0.18	-1.0
4,279,977	-		PFR28_03714	0.18	-1.9
4,279,977	-		PFR28_03714	0.18	+1.8
4,280,068	+		PFR28_03714	0.38	-0.5
4,280,068	+		PFR28_03714	0.38	-1.8
4,280,068	+		PFR28_03714	0.38	-3.8
4,280,068	+		PFR28_03714	0.38	-0.7
4,280,068	+		PFR28_03714	0.38	-2.0
4,280,068	+		PFR28_03714	0.38	-2.2
4,280,068	+		PFR28_03714	0.38	-1.8
4,280,069	-		PFR28_03714	0.39	-0.7
4,280,216	+		PFR28_03714	0.72	+0.3
4,280,217	-		PFR28_03714	0.72	-1.3
4,280,339	+				+0.7
4,280,339	+				-0.0
4,280,339	+				+1.3
4,280,339	+				-0.3
4,280,339	+				+0.1
4,280,339	+				+0.6
4,280,339	+				-0.6
4,280,340	-				-0.6
4,280,340	-				+0.1
4,280,340	-				-0.5
4,280,340	-				+0.5
4,280,340	-				-0.1
4,280,404	-				-0.4
4,280,404	-				+0.4
4,280,404	-				-1.3
4,280,532	+				-0.4
4,280,565	+				-0.2
4,280,566	-				+0.9
4,280,566	-				+0.1
4,280,566	-				-0.8
4,280,566	-				+0.1
4,280,566	-				-1.2
4,280,575	+				+0.4
4,280,604	+				+0.3
4,280,604	+				-0.1
4,280,604	+				+0.2
4,280,604	+				-0.2
4,280,604	+				+2.9
4,280,605	-				-0.0
4,280,605	-				-0.8
4,280,605	-				+0.4
4,280,605	-				-0.7
4,280,605	-				+0.5
4,280,605	-				+0.2
4,280,605	-				-1.7
4,280,605	-				-0.5
4,280,676	+		PFR28_03715	0.10	-0.9
4,280,787	+		PFR28_03715	0.23	+1.6
4,280,788	-		PFR28_03715	0.23	+0.4
4,280,788	-		PFR28_03715	0.23	-0.2
4,280,883	+		PFR28_03715	0.33	+1.5
4,280,883	+		PFR28_03715	0.33	-1.9
4,280,919	+		PFR28_03715	0.37	-0.6
4,280,919	+		PFR28_03715	0.37	-2.0
4,280,920	-		PFR28_03715	0.37	-0.1
4,280,920	-		PFR28_03715	0.37	+0.7
4,280,920	-		PFR28_03715	0.37	+0.9
4,280,931	+		PFR28_03715	0.39	-0.3
4,281,025	+		PFR28_03715	0.49	+0.3
4,281,025	+		PFR28_03715	0.49	-0.2
4,281,026	-		PFR28_03715	0.49	+0.1
4,281,102	+		PFR28_03715	0.58	-0.1
4,281,102	+		PFR28_03715	0.58	+0.2
4,281,103	-		PFR28_03715	0.58	+0.3
4,281,103	-		PFR28_03715	0.58	+0.3
4,281,103	-		PFR28_03715	0.58	+0.5
4,281,103	-		PFR28_03715	0.58	+0.1
4,281,195	+		PFR28_03715	0.68	-0.3
4,281,195	+		PFR28_03715	0.68	-2.3
4,281,195	+		PFR28_03715	0.68	-0.3
4,281,195	+		PFR28_03715	0.68	+0.1
4,281,232	-		PFR28_03715	0.73	-2.0