Strain Fitness in Pseudomonas sp. RS175 around PFR28_03699

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
4,263,862	+		PFR28_03697	0.55	-2.3
4,263,862	+		PFR28_03697	0.55	-2.5
4,263,862	+		PFR28_03697	0.55	-2.4
4,263,863	-		PFR28_03697	0.55	-4.0
4,263,863	-		PFR28_03697	0.55	-4.9
4,263,863	-		PFR28_03697	0.55	-4.2
4,263,866	+		PFR28_03697	0.55	-3.7
4,263,866	+		PFR28_03697	0.55	-4.1
4,263,866	+		PFR28_03697	0.55	-2.0
4,263,866	+		PFR28_03697	0.55	-1.9
4,263,982	+		PFR28_03697	0.67	-4.1
4,263,982	+		PFR28_03697	0.67	-2.2
4,263,983	-		PFR28_03697	0.67	-3.4
4,263,983	-		PFR28_03697	0.67	-1.9
4,263,983	-		PFR28_03697	0.67	-4.1
4,263,983	-		PFR28_03697	0.67	-1.1
4,264,054	+		PFR28_03697	0.74	-3.0
4,264,178	+		PFR28_03697	0.86	-2.2
4,264,178	+		PFR28_03697	0.86	-0.3
4,264,178	+		PFR28_03697	0.86	-2.8
4,264,307	-				-0.7
4,264,330	+				-2.8
4,264,330	+				-4.8
4,264,331	-				+0.3
4,264,331	-				-0.1
4,264,331	-				+0.7
4,264,331	-				-0.6
4,264,331	-				+0.3
4,264,332	+				-2.7
4,264,356	+				-2.7
4,264,366	+				-2.7
4,264,366	+				-2.4
4,264,367	-				+0.1
4,264,367	-				-0.0
4,264,377	+				-0.7
4,264,377	+				-2.4
4,264,377	+				-0.3
4,264,378	-				-0.4
4,264,378	-				-1.2
4,264,378	-				+0.1
4,264,416	+		PFR28_03698	0.10	-3.1
4,264,497	-		PFR28_03698	0.27	-3.0
4,264,499	-		PFR28_03698	0.27	-1.3
4,264,499	-		PFR28_03698	0.27	-3.6
4,264,499	-		PFR28_03698	0.27	-2.6
4,264,499	-		PFR28_03698	0.27	-1.7
4,264,534	+		PFR28_03698	0.34	-1.5
4,264,534	+		PFR28_03698	0.34	+1.3
4,264,534	+		PFR28_03698	0.34	-1.5
4,264,534	+		PFR28_03698	0.34	-1.5
4,264,535	-		PFR28_03698	0.35	-3.9
4,264,535	-		PFR28_03698	0.35	-2.8
4,264,535	-		PFR28_03698	0.35	-2.9
4,264,535	-		PFR28_03698	0.35	-0.2
4,264,538	+		PFR28_03698	0.35	+0.3
4,264,539	-		PFR28_03698	0.35	-2.0
4,264,539	-		PFR28_03698	0.35	-3.0
4,264,746	-		PFR28_03698	0.77	-1.5
4,264,774	+		PFR28_03698	0.83	-2.1
4,264,774	+		PFR28_03698	0.83	-1.1
4,264,774	+		PFR28_03698	0.83	-0.7
4,264,774	+		PFR28_03698	0.83	+0.3
4,264,774	+		PFR28_03698	0.83	+0.3
4,264,774	+		PFR28_03698	0.83	-0.3
4,264,775	-		PFR28_03698	0.83	-1.1
4,264,775	-		PFR28_03698	0.83	-1.4
4,264,775	-		PFR28_03698	0.83	+0.3
4,264,797	+		PFR28_03698	0.88	-0.7
4,264,797	+		PFR28_03698	0.88	-0.7
4,264,797	+		PFR28_03698	0.88	+0.3
4,264,797	+		PFR28_03698	0.88	+0.3
4,264,797	+		PFR28_03698	0.88	-1.9
4,264,797	+		PFR28_03698	0.88	-0.3
4,264,798	-		PFR28_03698	0.88	+0.0
4,264,798	-		PFR28_03698	0.88	-0.3
4,264,798	-		PFR28_03698	0.88	-0.3
4,264,798	-		PFR28_03698	0.88	-3.7
4,264,800	+		PFR28_03698	0.88	-1.3
4,264,800	+		PFR28_03698	0.88	-0.3
4,264,800	+		PFR28_03698	0.88	-0.3
4,264,800	+		PFR28_03698	0.88	-1.5
4,264,800	+		PFR28_03698	0.88	-0.3
4,264,801	-		PFR28_03698	0.89	-1.1
4,264,801	-		PFR28_03698	0.89	-2.9
4,264,801	-		PFR28_03698	0.89	-2.8
4,264,844	+				+0.3
4,264,844	+				-0.7
4,264,844	+				+0.3
4,264,844	+				+0.3
4,264,844	+				-0.3
4,264,845	-				-0.7
4,264,845	-				-2.4
4,264,845	-				-2.3
4,264,845	-				-1.1
4,264,845	-				-1.7
4,264,845	-				-1.5
4,264,845	-				-3.8
4,264,845	-				-1.7
4,264,845	-				-2.6
4,264,847	+				-0.7
4,264,848	-				-1.9
4,264,860	+				-1.3
4,264,860	+				-1.7
4,264,860	+				-1.1
4,264,860	+				-0.3
4,264,861	-				-2.2
4,264,861	-				-3.6
4,264,861	-				-2.0
4,264,861	-				-1.5
4,264,864	+				-1.3
4,264,864	+				-0.3
4,264,865	-				-1.5
4,264,865	-				+0.6
4,264,865	-				-0.7
4,264,865	-				-2.7
4,264,865	-				-3.0
4,264,888	+				-2.8
4,264,888	+				+1.3
4,264,888	+				-1.9
4,264,888	+				+1.3
4,264,888	+				-0.7
4,264,889	-				-1.5
4,264,889	-				-2.5
4,264,889	-				-1.9
4,264,961	+				-0.3
4,265,014	+				-0.3
4,265,046	+		PFR28_03699	0.11	-0.7
4,265,046	+		PFR28_03699	0.11	+1.3
4,265,046	+		PFR28_03699	0.11	+1.3
4,265,046	+		PFR28_03699	0.11	-0.3
4,265,047	-		PFR28_03699	0.11	+0.3
4,265,047	-		PFR28_03699	0.11	-1.1
4,265,088	+		PFR28_03699	0.13	+1.3
4,265,088	+		PFR28_03699	0.13	-0.1
4,265,088	+		PFR28_03699	0.13	+0.3
4,265,088	+		PFR28_03699	0.13	-1.1
4,265,089	-		PFR28_03699	0.13	-0.7
4,265,089	-		PFR28_03699	0.13	-1.1
4,265,113	-		PFR28_03699	0.15	-1.1
4,265,113	-		PFR28_03699	0.15	-0.3
4,265,113	-		PFR28_03699	0.15	+1.3
4,265,361	+		PFR28_03699	0.29	+1.3
4,265,361	+		PFR28_03699	0.29	-0.3
4,265,361	+		PFR28_03699	0.29	-0.3
4,265,362	-		PFR28_03699	0.29	-1.9
4,265,362	-		PFR28_03699	0.29	+0.3
4,265,362	-		PFR28_03699	0.29	+1.3
4,265,362	-		PFR28_03699	0.29	+1.3
4,265,362	-		PFR28_03699	0.29	+0.3
4,265,364	+		PFR28_03699	0.29	-0.3
4,265,364	+		PFR28_03699	0.29	-1.7
4,265,364	+		PFR28_03699	0.29	-1.1
4,265,365	-		PFR28_03699	0.29	-2.1
4,265,603	+		PFR28_03699	0.43	-0.7
4,265,793	+		PFR28_03699	0.54	-2.4
4,265,793	+		PFR28_03699	0.54	-0.3
4,265,794	-		PFR28_03699	0.54	-0.3
4,265,884	+		PFR28_03699	0.59	-1.1
4,266,018	-		PFR28_03699	0.67	-0.7
4,266,030	+		PFR28_03699	0.68	-0.7
4,266,030	+		PFR28_03699	0.68	+0.3
4,266,030	+		PFR28_03699	0.68	+0.3
4,266,030	+		PFR28_03699	0.68	-1.1
4,266,031	-		PFR28_03699	0.68	+0.3
4,266,031	-		PFR28_03699	0.68	-1.3
4,266,063	+		PFR28_03699	0.70	-1.3
4,266,064	-		PFR28_03699	0.70	-0.3
4,266,064	-		PFR28_03699	0.70	-0.7
4,266,145	-		PFR28_03699	0.75	-1.1
4,266,145	-		PFR28_03699	0.75	-0.3
4,266,145	-		PFR28_03699	0.75	-0.7
4,266,145	-		PFR28_03699	0.75	+1.3
4,266,271	+		PFR28_03699	0.82	+0.3
4,266,365	+		PFR28_03699	0.87	-0.7
4,266,366	-		PFR28_03699	0.87	-1.3
4,266,402	+		PFR28_03699	0.89	-1.3
4,266,483	+				-1.1
4,266,483	+				+1.3
4,266,483	+				+1.3
4,266,483	+				+0.3
4,266,483	+				-1.1
4,266,483	+				-0.7
4,266,483	+				-0.7
4,266,484	-				-0.7
4,266,484	-				-1.1
4,266,484	-				+1.3
4,266,484	-				-1.1
4,266,484	-				-0.7
4,266,516	+				+0.3
4,266,516	+				+1.3
4,266,516	+				-1.7
4,266,517	-				+0.3
4,266,517	-				-1.3
4,266,517	-				+1.3
4,266,517	-				-0.3
4,266,521	-				+1.3
4,266,521	-				-1.5
4,266,522	+				-0.3
4,266,522	+				-0.7
4,266,522	+				-0.3
4,266,522	+				-0.7
4,266,522	+				-0.3
4,266,523	-				-1.7
4,266,523	-				+0.3
4,266,523	-				+0.3
4,266,523	-				-1.3
4,266,523	-				-0.3
4,266,523	-				+1.3
4,266,572	+				-0.3
4,266,573	-				-1.7
4,266,596	+				-1.7
4,266,596	+				-3.0
4,266,597	-				+0.6
4,266,637	+				-0.7
4,266,637	+				-2.1
4,266,637	+				+0.3
4,266,637	+				-1.5
4,266,637	+				-1.3
4,266,640	+				-0.9
4,266,640	+				-2.7
4,266,640	+				-2.1
4,266,640	+				-3.1
4,266,641	-				-0.3
4,266,641	-				-2.1
4,266,641	-				+0.2
4,266,641	-				+0.5
4,266,641	-				+1.7
4,266,641	-				+0.4
4,266,646	+				-1.3
4,266,646	+				-2.8
4,266,646	+				-3.8
4,266,646	+				-1.5
4,266,646	+				-3.1
4,266,646	+				-1.7
4,266,647	-				+0.3
4,266,647	-				-0.6
4,266,647	-				-0.1
4,266,647	-				-0.8
4,266,647	-				+0.0
4,266,684	+				-1.5
4,266,684	+				-1.3
4,266,685	-				+1.0
4,266,685	-				-0.6
4,266,685	-				+0.1
4,266,707	+				-1.9
4,266,707	+				-0.7
4,266,708	-				+0.0
4,266,708	-				+0.8
4,266,708	-				+0.5
4,266,708	-				-0.7
4,266,755	+				-1.3
4,266,755	+				-2.3
4,266,756	-				-0.8
4,266,756	-				-2.1
4,266,756	-				-0.8
4,266,756	-				+0.9
4,266,771	+				-1.9
4,266,771	+				-3.0
4,266,771	+				-1.7
4,266,771	+				-3.1
4,266,771	+				-1.5
4,266,772	-				-3.3
4,266,772	-				-1.4
4,266,772	-				-2.1
4,266,835	+				-2.6
4,266,835	+				-2.3
4,266,836	-				-1.2
4,266,836	-				-2.7
4,266,885	+				-0.8
4,266,885	+				-1.9
4,266,886	-				+0.2
4,266,902	+				+0.1
4,266,902	+				-2.1
4,266,902	+				-0.6
4,266,902	+				-2.4
4,266,903	-				-0.1
4,266,903	-				+0.1
4,266,903	-				+0.2
4,266,903	-				+0.1
4,266,949	-				+0.1
4,267,053	+		PFR28_03700	0.16	-1.0
4,267,053	+		PFR28_03700	0.16	+0.4
4,267,054	-		PFR28_03700	0.16	-0.0
4,267,054	-		PFR28_03700	0.16	+0.3
4,267,054	-		PFR28_03700	0.16	+0.3
4,267,054	-		PFR28_03700	0.16	-0.2
4,267,333	+		PFR28_03700	0.82	+0.9
4,267,333	+		PFR28_03700	0.82	-1.3
4,267,333	+		PFR28_03700	0.82	+0.4
4,267,334	-		PFR28_03700	0.82	-0.4
4,267,334	-		PFR28_03700	0.82	-0.4
4,267,334	-		PFR28_03700	0.82	-0.1
4,267,334	-		PFR28_03700	0.82	+0.2
4,267,367	+				+0.1
4,267,495	+		PFR28_03701	0.24	-0.3
4,267,495	+		PFR28_03701	0.24	-0.7
4,267,495	+		PFR28_03701	0.24	+0.4
4,267,496	-		PFR28_03701	0.24	+0.2
4,267,496	-		PFR28_03701	0.24	-0.0
4,267,496	-		PFR28_03701	0.24	-0.3