Strain Fitness in Pseudomonas sp. RS175 around PFR28_03455

Experiment: D-Glucose (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 10 mM
3,976,564	+				-0.1
3,976,564	+				+0.5
3,976,564	+				-0.4
3,976,564	+				+1.2
3,976,564	+				+0.0
3,976,564	+				+0.5
3,976,564	+				-0.3
3,976,576	-				+0.3
3,976,615	-				-0.3
3,976,615	-				-0.2
3,976,687	-				+0.2
3,976,719	+				+0.2
3,976,720	-				-0.1
3,976,734	-				-0.4
3,976,746	+				+0.2
3,976,746	+				+0.2
3,976,746	+				-0.4
3,976,746	+				-0.0
3,976,746	+				-0.5
3,976,747	-				-1.6
3,976,747	-				-0.3
3,976,747	-				-0.4
3,976,752	+				+0.0
3,976,752	+				-0.9
3,976,752	+				-1.1
3,976,752	+				+0.2
3,976,752	+				+0.4
3,976,752	+				-0.4
3,976,752	+				+0.2
3,976,753	-				-0.6
3,976,753	-				-0.5
3,976,753	-				-0.7
3,976,753	-				-0.3
3,976,754	+				-0.4
3,976,754	+				+0.5
3,976,754	+				+0.6
3,976,754	+				-0.1
3,976,754	+				-0.3
3,976,755	-				-0.2
3,976,755	-				+0.1
3,976,755	-				-0.4
3,976,755	-				-0.8
3,976,790	-				+0.0
3,976,790	-				-0.4
3,976,811	+				-0.0
3,976,811	+				-0.2
3,976,811	+				-0.8
3,976,811	+				+0.3
3,976,811	+				+0.4
3,976,811	+				+0.3
3,976,811	+				+0.2
3,976,812	-				+0.3
3,976,812	-				-0.2
3,976,812	-				-1.1
3,976,812	-				-0.7
3,976,812	-				-1.4
3,976,813	+				+0.5
3,976,813	+				+0.1
3,976,813	+				+0.0
3,976,814	-				-0.4
3,976,814	-				-0.2
3,976,814	-				+1.8
3,976,814	-				-0.2
3,976,814	-				+0.2
3,976,832	+				-0.2
3,976,832	+				+0.1
3,976,833	-				+1.2
3,976,833	-				+0.2
3,976,833	-				-0.6
3,976,833	-				-1.6
3,976,907	+		PFR28_03454	0.11	-0.4
3,976,958	+		PFR28_03454	0.25	+0.1
3,976,958	+		PFR28_03454	0.25	+0.4
3,976,994	+		PFR28_03454	0.35	-0.4
3,976,994	+		PFR28_03454	0.35	+0.6
3,977,073	-		PFR28_03454	0.56	+0.4
3,977,073	-		PFR28_03454	0.56	-0.1
3,977,144	+		PFR28_03454	0.75	-0.4
3,977,144	+		PFR28_03454	0.75	+0.7
3,977,144	+		PFR28_03454	0.75	+0.4
3,977,144	+		PFR28_03454	0.75	+0.0
3,977,145	-		PFR28_03454	0.75	+0.0
3,977,145	-		PFR28_03454	0.75	+1.2
3,977,153	+		PFR28_03454	0.77	-0.5
3,977,153	+		PFR28_03454	0.77	-0.5
3,977,153	+		PFR28_03454	0.77	-0.4
3,977,153	+		PFR28_03454	0.77	+0.5
3,977,153	+		PFR28_03454	0.77	-0.1
3,977,153	+		PFR28_03454	0.77	-0.2
3,977,154	-		PFR28_03454	0.77	-0.4
3,977,166	+		PFR28_03454	0.81	-1.8
3,977,166	+		PFR28_03454	0.81	-0.1
3,977,166	+		PFR28_03454	0.81	-1.2
3,977,166	+		PFR28_03454	0.81	-2.1
3,977,166	+		PFR28_03454	0.81	+0.2
3,977,166	+		PFR28_03454	0.81	+1.0
3,977,166	+		PFR28_03454	0.81	+1.2
3,977,166	+		PFR28_03454	0.81	+1.8
3,977,166	+		PFR28_03454	0.81	+0.7
3,977,167	-		PFR28_03454	0.81	+0.4
3,977,167	-		PFR28_03454	0.81	+0.2
3,977,167	-		PFR28_03454	0.81	-0.2
3,977,167	-		PFR28_03454	0.81	+0.7
3,977,167	-		PFR28_03454	0.81	+0.6
3,977,167	-		PFR28_03454	0.81	-0.4
3,977,167	-		PFR28_03454	0.81	-0.9
3,977,167	-		PFR28_03454	0.81	+0.7
3,977,167	-		PFR28_03454	0.81	-0.4
3,977,167	-		PFR28_03454	0.81	-0.7
3,977,167	-		PFR28_03454	0.81	-1.1
3,977,167	-		PFR28_03454	0.81	-1.3
3,977,167	-		PFR28_03454	0.81	-1.4
3,977,167	-		PFR28_03454	0.81	-0.7
3,977,167	-		PFR28_03454	0.81	-0.0
3,977,167	-		PFR28_03454	0.81	-0.6
3,977,167	-		PFR28_03454	0.81	-1.1
3,977,167	-		PFR28_03454	0.81	+1.1
3,977,167	-		PFR28_03454	0.81	-0.8
3,977,167	-		PFR28_03454	0.81	-0.9
3,977,167	-		PFR28_03454	0.81	+0.5
3,977,266	-				+0.3
3,977,333	+				+0.1
3,977,333	+				+0.8
3,977,334	-				-1.6
3,977,334	-				+0.1
3,977,421	+				+0.4
3,977,422	-				-0.8
3,977,425	+				-1.9
3,977,425	+				-0.2
3,977,426	-				-0.4
3,977,426	-				-0.4
3,977,426	-				-1.5
3,977,445	+				-0.1
3,977,446	-				-0.7
3,977,446	-				-1.6
3,977,460	+				+0.1
3,977,460	+				-2.8
3,977,460	+				-2.8
3,977,460	+				-1.1
3,977,460	+				-1.2
3,977,460	+				-0.4
3,977,460	+				-1.0
3,977,461	-				-1.9
3,977,461	-				-1.6
3,977,461	-				-0.6
3,977,461	-				-2.5
3,977,461	-				-1.4
3,977,463	+				-1.9
3,977,464	-				-0.4
3,977,534	-				-1.6
3,978,066	+		PFR28_03455	0.39	-0.8
3,978,108	+		PFR28_03455	0.42	-0.4
3,978,109	-		PFR28_03455	0.42	-1.4
3,978,109	-		PFR28_03455	0.42	+0.2
3,978,321	-		PFR28_03455	0.57	-0.8
3,978,403	+		PFR28_03455	0.62	-2.1
3,978,424	-		PFR28_03455	0.64	-2.1
3,978,424	-		PFR28_03455	0.64	+0.2
3,978,424	-		PFR28_03455	0.64	+0.3
3,978,603	+		PFR28_03455	0.76	-1.4
3,978,603	+		PFR28_03455	0.76	-0.8
3,978,604	-		PFR28_03455	0.76	+0.2
3,978,604	-		PFR28_03455	0.76	-1.1
3,978,604	-		PFR28_03455	0.76	-0.9
3,978,604	-		PFR28_03455	0.76	+0.5
3,978,604	-		PFR28_03455	0.76	-1.6
3,978,604	-		PFR28_03455	0.76	-2.5
3,978,604	-		PFR28_03455	0.76	-1.6
3,978,604	-		PFR28_03455	0.76	-1.6
3,978,604	-		PFR28_03455	0.76	-1.8
3,978,705	+		PFR28_03455	0.83	-3.1
3,978,706	-		PFR28_03455	0.83	-1.5
3,978,763	-		PFR28_03455	0.87	-1.9
3,978,763	-		PFR28_03455	0.87	-1.8
3,978,763	-		PFR28_03455	0.87	-1.8
3,978,888	+				-1.5
3,978,888	+				-0.9
3,978,888	+				-1.8
3,978,888	+				+0.1
3,978,888	+				+1.2
3,978,888	+				-1.9
3,978,889	-				-2.4
3,978,889	-				-0.8
3,978,889	-				-2.6
3,979,090	-				-0.6
3,979,263	+		PFR28_03456	0.25	-0.2
3,979,264	-		PFR28_03456	0.25	-0.1
3,979,264	-		PFR28_03456	0.25	+0.7
3,979,413	+		PFR28_03456	0.41	+0.5
3,979,413	+		PFR28_03456	0.41	-0.9
3,979,413	+		PFR28_03456	0.41	+0.2
3,979,560	+		PFR28_03456	0.57	-0.8
3,979,560	+		PFR28_03456	0.57	+0.2
3,979,561	-		PFR28_03456	0.57	+0.9
3,979,561	-		PFR28_03456	0.57	+0.2
3,979,571	+		PFR28_03456	0.58	+0.8
3,979,571	+		PFR28_03456	0.58	+1.4
3,979,571	+		PFR28_03456	0.58	-0.1
3,979,872	+		PFR28_03456	0.90	+0.2